Cow genome map

Conread name: 4civ-UMC-p4civv1-004-c09

Conread position: 1-143
Cow position: chr11:25336860-25336999 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 109

Conread position: 1-143
Cow position: chr11:37118270-37118412 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 22, 92

Conread position: 1-152
Cow position: chr11:7315341-7315192 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 38

Conread position: 1-157
Cow position: chr11:41426699-41426852 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 21, 31

Conread position: 1-158
Cow position: chr11:25165229-25165383 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 144, 27

Conread position: 1-158
Cow position: chr11:51756101-51756251 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 40

Conread position: 1-158
Cow position: chr11:84890967-84890809 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 22, 92

Conread position: 1-160
Cow position: chr11:17321443-17321602 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 90

Conread position: 1-160
Cow position: chr11:35363280-35363441 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 91

Conread position: 1-164
Cow position: chr11:2281504-2281347 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 32

Conread position: 1-164
Cow position: chr11:32609777-32609949 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 101

Conread position: 1-164
Cow position: chr11:36647146-36647304 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 92

Conread position: 1-164
Cow position: chr11:73478406-73478566 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 30

Conread position: 1-173
Cow position: chr11:41577223-41577058 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 32

Conread position: 1-175
Cow position: chr11:18210563-18210388 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 22, 27

Conread position: 1-176
Cow position: chr11:40860931-40860753 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 96

Conread position: 1-176
Cow position: chr11:64904781-64904956 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 30

Conread position: 1-179
Cow position: chr11:57111523-57111345 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 10

Conread position: 1-179
Cow position: chr11:63518800-63518974 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 144, 21

Conread position: 1-181
Cow position: chr11:34412882-34413059 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 38

Conread position: 1-187
Cow position: chr11:12555635-12555441 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 45

Conread position: 1-202
Cow position: chr11:51044151-51043946 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 95

Conread position: 1-207
Cow position: chr11:49105843-49106044 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 40

Conread position: 1-207
Cow position: chr11:59370800-59371001 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 58

Conread position: 1-208
Cow position: chr11:17553561-17553357 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 72

Conread position: 1-208
Cow position: chr11:77241159-77241358 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 60

Conread position: 1-212
Cow position: chr11:17968790-17968590 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 32

Conread position: 1-212
Cow position: chr11:55117258-55117456 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 22, 132

Conread position: 1-215
Cow position: chr11:3175164-3175377 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 91

Conread position: 1-216
Cow position: chr11:1485575-1485363 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 22, 92

Conread position: 1-217
Cow position: chr11:8105568-8105782 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 21, 32

Conread position: 1-217
Cow position: chr11:47586560-47586353 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 142, 19

Conread position: 1-217
Cow position: chr11:62808863-62808655 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 30

Conread position: 1-217
Cow position: chr11:63516609-63516824 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 22, 90

Conread position: 1-217
Cow position: chr11:65857643-65857857 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 32

Conread position: 1-221
Cow position: chr11:21830567-21830347 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 21, 55

Conread position: 1-223
Cow position: chr11:41239489-41239266 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 91

Conread position: 1-224
Cow position: chr11:62880840-62880620 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 92, 29

Conread position: 1-225
Cow position: chr11:17112841-17112627 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 30

Conread position: 1-228
Cow position: chr11:2514807-2514586 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 90

Conread position: 1-228
Cow position: chr11:25319836-25320063 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 82

Conread position: 1-230
Cow position: chr11:41438439-41438206 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 45

Conread position: 1-231
Cow position: chr11:4412232-4412011 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 90

Conread position: 1-231
Cow position: chr11:16251463-16251233 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 54

Conread position: 1-247
Cow position: chr11:171911-171675 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 44

Conread position: 1-256
Cow position: chr11:18371656-18371403 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 30

Conread position: 1-256
Cow position: chr11:18591648-18591398 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 144, 89

Conread position: 1-256
Cow position: chr11:61246672-61246423 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 141, 20

Conread position: 1-260
Cow position: chr11:50236182-50235937 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 41

Conread position: 1-261
Cow position: chr11:22932184-22931930 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 8

Conread position: 1-263
Cow position: chr11:39115279-39115536 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 54

Conread position: 1-263
Cow position: chr11:42003171-42002905 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 23, 36

Conread position: 1-272
Cow position: chr11:30120876-30120610 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 40

Conread position: 1-272
Cow position: chr11:42793190-42792921 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 90

Conread position: 1-276
Cow position: chr11:18341253-18340985 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 93

Conread position: 1-283
Cow position: chr11:38874617-38874339 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 21, 39

Conread position: 1-284
Cow position: chr11:77766816-77766531 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 22, 51

Conread position: 1-284
Cow position: chr11:80788125-80787843 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 21, 40

Conread position: 1-300
Cow position: chr11:5197292-5196995 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 194
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 54

Conread position: 1-302
Cow position: chr11:5226956-5226649 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 21, 92

Conread position: 1-302
Cow position: chr11:43430661-43430375 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 21, 13

Conread position: 1-304
Cow position: chr11:44642500-44642208 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 22, 32

Conread position: 1-307
Cow position: chr11:11232667-11232369 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 141, 31

Conread position: 1-307
Cow position: chr11:31352787-31352465 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 95

Conread position: 1-307
Cow position: chr11:38638906-38639198 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 205
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 58

Conread position: 1-307
Cow position: chr11:45898270-45897962 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 24, 90

Conread position: 1-308
Cow position: chr11:33341361-33341057 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 22, 41

Conread position: 1-308
Cow position: chr11:47899062-47899356 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 90

Conread position: 1-311
Cow position: chr11:69810689-69810994 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 90

Conread position: 1-312
Cow position: chr11:41986258-41985954 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 40

Conread position: 1-313
Cow position: chr11:36986747-36987042 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 22, 92

Conread position: 1-318
Cow position: chr11:21894368-21894064 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 220
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 21, 55

Conread position: 1-318
Cow position: chr11:23128754-23128442 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 50

Conread position: 1-319
Cow position: chr11:30354852-30355156 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 23, 94

Conread position: 1-320
Cow position: chr11:30934210-30934516 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 21, 40

Conread position: 1-321
Cow position: chr11:34032412-34032098 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 142, 21

Conread position: 1-321
Cow position: chr11:76114441-76114743 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 30

Conread position: 1-324
Cow position: chr11:30475784-30476102 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 214
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 92

Conread position: 1-325
Cow position: chr11:17278878-17278571 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 142, 31

Conread position: 1-325
Cow position: chr11:17495960-17495637 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 21, 11

Conread position: 1-325
Cow position: chr11:18588795-18588481 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 21, 109

Conread position: 1-325
Cow position: chr11:33310757-33311082 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 224
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 143, 37

Conread position: 1-325
Cow position: chr11:36799513-36799203 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 144, 22

Conread position: 1-326
Cow position: chr11:36659027-36658718 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 23, 35

Conread position: 1-326
Cow position: chr11:59872711-59873033 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 230
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 23, 93

Conread position: 1-326
Cow position: chr11:62155412-62155744 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 37

Conread position: 1-326
Cow position: chr11:63482640-63482323 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 237
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 21, 32

Conread position: 1-326
Cow position: chr11:70838517-70838184 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 22, 52

Conread position: 1-327
Cow position: chr11:49152739-49153055 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 144, 29

Conread position: 1-328
Cow position: chr11:3233866-3234183 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 21, 92

Conread position: 1-330
Cow position: chr11:23232728-23232410 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 22, 54

Conread position: 1-330
Cow position: chr11:29947141-29946803 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 22, 40

Conread position: 1-330
Cow position: chr11:35684712-35684390 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 22, 92

Conread position: 1-330
Cow position: chr11:67804534-67804854 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 91

Conread position: 1-331
Cow position: chr11:30924938-30925265 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 30

Conread position: 1-331
Cow position: chr11:37974711-37975044 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 223
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 32

Conread position: 1-334
Cow position: chr11:7589976-7590302 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 227
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 90

Conread position: 1-335
Cow position: chr11:39462403-39462740 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 137

Conread position: 1-337
Cow position: chr11:70484076-70483734 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 23, 82

Conread position: 1-338
Cow position: chr11:28643867-28644205 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 224
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 13

Conread position: 1-338
Cow position: chr11:30879465-30879785 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 91

Conread position: 1-338
Cow position: chr11:36238567-36238896 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 237
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 144, 89

Conread position: 1-338
Cow position: chr11:48271980-48272318 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 235
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 92

Conread position: 1-338
Cow position: chr11:54334120-54334446 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 33, 22

Conread position: 1-338
Cow position: chr11:61454749-61454401 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 250
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 242

Conread position: 1-339
Cow position: chr11:1071306-1070972 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 229
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 50

Conread position: 1-342
Cow position: chr11:4663253-4662926 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 226
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 29

Conread position: 1-342
Cow position: chr11:65495542-65495216 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 71, 22

Conread position: 1-344
Cow position: chr11:73354268-73353936 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 22, 27

Conread position: 1-346
Cow position: chr11:377863-377517 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 92

Conread position: 1-346
Cow position: chr11:40792908-40792579 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 235
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 30

Conread position: 1-352
Cow position: chr11:18244156-18243815 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 239
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 21, 91

Conread position: 1-352
Cow position: chr11:32436114-32436468 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 244
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 23, 92

Conread position: 1-352
Cow position: chr11:33414019-33414368 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 67

Conread position: 1-352
Cow position: chr11:38236029-38236383 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 54

Conread position: 1-352
Cow position: chr11:40458906-40459240 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 38

Conread position: 1-352
Cow position: chr11:48672487-48672844 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 111

Conread position: 1-352
Cow position: chr11:51687940-51687597 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 21, 41

Conread position: 1-353
Cow position: chr11:79728888-79728534 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 92

Conread position: 1-360
Cow position: chr11:13499800-13500152 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 22

Conread position: 1-363
Cow position: chr11:59902673-59903033 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 237
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 21, 91

Conread position: 1-365
Cow position: chr11:4436118-4436478 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 257
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 38

Conread position: 1-375
Cow position: chr11:11125449-11125821 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 260
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 22, 32

Conread position: 1-375
Cow position: chr11:13191005-13191389 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 260
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 21, 161

Conread position: 1-375
Cow position: chr11:21549281-21549635 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 242
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 30

Conread position: 1-375
Cow position: chr11:33349916-33349549 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 145

Conread position: 1-375
Cow position: chr11:55333694-55334072 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 262
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 21, 90

Conread position: 1-375
Cow position: chr11:84385861-84385484 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 260
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 23, 103

Conread position: 1-375
Cow position: chr11:87155300-87155674 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 82

Conread position: 1-377
Cow position: chr11:287548-287179 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 239
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 21, 41

Conread position: 1-381
Cow position: chr11:83357176-83357555 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 252
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 109

Conread position: 1-382
Cow position: chr11:29916323-29916702 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 255
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 21, 32

Conread position: 1-382
Cow position: chr11:33294006-33293623 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 253
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 285

Conread position: 1-383
Cow position: chr11:6400287-6399903 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 267
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 65

Conread position: 1-384
Cow position: chr11:21728482-21728126 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 252
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 33

Conread position: 1-384
Cow position: chr11:29960090-29960455 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 258
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 29

Conread position: 1-384
Cow position: chr11:43361011-43360625 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 272
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 209

Conread position: 1-385
Cow position: chr11:5961098-5961470 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 245
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 30

Conread position: 1-385
Cow position: chr11:25620610-25620227 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 272
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 32

Conread position: 1-385
Cow position: chr11:42016853-42016475 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 173

Conread position: 1-385
Cow position: chr11:53773458-53773846 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 259
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 21, 102

Conread position: 1-385
Cow position: chr11:77705551-77705913 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 252
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 23

Conread position: 1-386
Cow position: chr11:4732124-4732508 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 263
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 66

Conread position: 1-386
Cow position: chr11:15772937-15772549 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 181

Conread position: 1-386
Cow position: chr11:19593604-19593983 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 257
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 106

Conread position: 1-386
Cow position: chr11:23251818-23251435 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 269
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 21, 167

Conread position: 1-386
Cow position: chr11:25791906-25791529 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 263
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 21, 54

Conread position: 1-386
Cow position: chr11:26535560-26535948 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 257
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 23, 89

Conread position: 1-386
Cow position: chr11:30708288-30708669 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 276
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 24, 40

Conread position: 1-386
Cow position: chr11:30720883-30721264 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 255
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 32

Conread position: 1-386
Cow position: chr11:34145131-34144755 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 89

Conread position: 1-386
Cow position: chr11:34616054-34616425 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 260
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 21, 32

Conread position: 1-386
Cow position: chr11:36182474-36182855 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 266
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 40

Conread position: 1-386
Cow position: chr11:40467338-40466959 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 257
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 161

Conread position: 1-386
Cow position: chr11:44031785-44032170 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 265
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 24, 82

Conread position: 1-386
Cow position: chr11:45872533-45872146 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 30

Conread position: 1-386
Cow position: chr11:52381085-52380708 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 261
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 21, 29

Conread position: 1-386
Cow position: chr11:55744259-55744633 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 260
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 21, 60

Conread position: 1-386
Cow position: chr11:66897018-66896635 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 240
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 162

Conread position: 1-386
Cow position: chr11:68910062-68909689 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 27

Conread position: 1-386
Cow position: chr11:70459360-70459721 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 258
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 34

Conread position: 1-386
Cow position: chr11:75480241-75479858 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 266
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 33

Conread position: 1-386
Cow position: chr11:77745465-77745085 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 266
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 21, 32

Conread position: 1-386
Cow position: chr11:77758975-77758597 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 77

Conread position: 1-386
Cow position: chr11:81300827-81300457 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 253
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 21, 81

Conread position: 1-386
Cow position: chr11:83066281-83066656 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 258
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 28

Conread position: 1-386
Cow position: chr11:85723487-85723858 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 32

Conread position: 1-387
Cow position: chr11:3720037-3720420 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 256
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 109

Conread position: 1-387
Cow position: chr11:14649527-14649146 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 259
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 107, 19

Conread position: 1-387
Cow position: chr11:15503886-15504274 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 261
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 21, 275

Conread position: 1-387
Cow position: chr11:51293624-51293246 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 270
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 21, 33

Conread position: 2-117
Cow position: chr11:83033914-83033801 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 89

Conread position: 2-140
Cow position: chr11:70709768-70709633 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 37

Conread position: 2-176
Cow position: chr11:71846562-71846385 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 21, 89

Conread position: 2-179
Cow position: chr11:74929566-74929746 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 21, 90

Conread position: 2-217
Cow position: chr11:47165351-47165144 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 64

Conread position: 2-217
Cow position: chr11:48697234-48697445 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 27

Conread position: 2-259
Cow position: chr11:14094638-14094381 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 16, 58

Conread position: 2-265
Cow position: chr11:62490220-62490483 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 21, 54

Conread position: 2-309
Cow position: chr11:65409371-65409068 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 22, 90

Conread position: 2-312
Cow position: chr11:5031991-5031684 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 92

Conread position: 2-319
Cow position: chr11:23138275-23137955 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 20, 40

Conread position: 2-324
Cow position: chr11:45631978-45631662 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 217
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 21, 89

Conread position: 2-325
Cow position: chr11:32749894-32750215 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 21, 161

Conread position: 2-330
Cow position: chr11:30639162-30638840 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 146

Conread position: 2-334
Cow position: chr11:18086551-18086234 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 227
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 91, 21

Conread position: 2-336
Cow position: chr11:8988443-8988116 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 20, 41

Conread position: 2-352
Cow position: chr11:6234092-6233748 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 21, 40

Conread position: 2-360
Cow position: chr11:33348398-33348056 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 246
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 22, 31

Conread position: 2-374
Cow position: chr11:33287175-33286803 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 250
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 20, 16

Conread position: 2-375
Cow position: chr11:23385458-23385085 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 261
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 20, 31

Conread position: 2-377
Cow position: chr11:61202949-61203321 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 253
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 20, 108

Conread position: 2-382
Cow position: chr11:2788166-2788555 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 264
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 20, 31

Conread position: 2-384
Cow position: chr11:17889940-17889565 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 255
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 32

Conread position: 2-385
Cow position: chr11:4674664-4674281 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 258
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 20, 90

Conread position: 2-386
Cow position: chr11:8495823-8496197 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 256
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 20, 164

Conread position: 2-386
Cow position: chr11:10095131-10095507 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 263
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 20, 29

Conread position: 2-386
Cow position: chr11:13043355-13042984 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 21

Conread position: 2-386
Cow position: chr11:21844349-21843975 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 263
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 89

Conread position: 2-386
Cow position: chr11:24601757-24602121 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 91

Conread position: 2-386
Cow position: chr11:30764266-30764656 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 253
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 20, 199

Conread position: 2-386
Cow position: chr11:36981354-36981729 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 260
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 20, 29

Conread position: 2-387
Cow position: chr11:70382909-70382524 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 111

Conread position: 2-388
Cow position: chr11:1486080-1485694 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 248
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 29

Conread position: 3-169
Cow position: chr11:84924311-84924143 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 19, 92

Conread position: 3-180
Cow position: chr11:62019811-62019629 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 95

Conread position: 3-219
Cow position: chr11:37100572-37100358 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 19, 42

Conread position: 3-229
Cow position: chr11:62979265-62979499 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 20, 172

Conread position: 3-230
Cow position: chr11:48932796-48932577 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 38

Conread position: 3-332
Cow position: chr11:66041061-66041390 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 52

Conread position: 3-338
Cow position: chr11:7924802-7924476 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 20, 131

Conread position: 3-338
Cow position: chr11:63847637-63847962 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 230
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 58

Conread position: 3-351
Cow position: chr11:19755444-19755780 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 229
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 127

Conread position: 3-352
Cow position: chr11:6835316-6835665 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 240
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 107

Conread position: 3-385
Cow position: chr11:80564092-80564460 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 247
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 69

Conread position: 3-386
Cow position: chr11:3780637-3780251 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 259
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 102

Conread position: 3-386
Cow position: chr11:7458496-7458116 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 254
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 139, 12

Conread position: 3-386
Cow position: chr11:46748079-46747695 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 89

Conread position: 3-386
Cow position: chr11:62620172-62620540 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 256
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 20, 36

Conread position: 3-386
Cow position: chr11:81143771-81143380 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 257
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 96

Conread position: 3-387
Cow position: chr11:57725041-57724658 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 261
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 20, 167

Conread position: 4-167
Cow position: chr11:53719733-53719893 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 52

Conread position: 4-175
Cow position: chr11:68570883-68570708 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 8

Conread position: 4-214
Cow position: chr11:53130600-53130807 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 37

Conread position: 4-217
Cow position: chr11:31900836-31901043 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 27

Conread position: 4-225
Cow position: chr11:83196287-83196502 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 43

Conread position: 4-256
Cow position: chr11:27386551-27386303 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 35

Conread position: 4-304
Cow position: chr11:64090298-64090013 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 19, 87

Conread position: 4-305
Cow position: chr11:47544916-47545216 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 87

Conread position: 4-307
Cow position: chr11:50778159-50778454 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 87

Conread position: 4-317
Cow position: chr11:69119088-69119390 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 19, 91

Conread position: 4-336
Cow position: chr11:65607905-65607573 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 19, 89

Conread position: 4-338
Cow position: chr11:20761633-20761960 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 35

Conread position: 4-352
Cow position: chr11:3726074-3726417 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 18, 40

Conread position: 4-352
Cow position: chr11:81281733-81282083 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 239
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 18, 89

Conread position: 4-353
Cow position: chr11:40969-41306 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 19, 90

Conread position: 4-365
Cow position: chr11:23586423-23586783 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 242
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 87

Conread position: 4-385
Cow position: chr11:19247406-19247042 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 27

Conread position: 4-386
Cow position: chr11:27746709-27747082 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 257
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 90

Conread position: 4-386
Cow position: chr11:31525652-31526044 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 256
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 18, 0

Conread position: 4-386
Cow position: chr11:40818850-40818468 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 263
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 29

Conread position: 4-386
Cow position: chr11:52297435-52297059 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 264
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 18, 87

Conread position: 4-386
Cow position: chr11:65762808-65762420 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 264
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 27

Conread position: 4-386
Cow position: chr11:83043572-83043203 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 244
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 27

Conread position: 5-132
Cow position: chr11:22103544-22103668 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 35

Conread position: 5-227
Cow position: chr11:5677510-5677730 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 18, 117

Conread position: 5-268
Cow position: chr11:36286488-36286743 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 51

Conread position: 5-316
Cow position: chr11:10213776-10213473 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 18, 65

Conread position: 5-321
Cow position: chr11:1362691-1362367 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 18, 88

Conread position: 5-325
Cow position: chr11:77750978-77750669 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 34

Conread position: 5-326
Cow position: chr11:17831438-17831117 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 230
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 94

Conread position: 5-386
Cow position: chr11:27248281-27248652 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 261
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 18, 29

Conread position: 5-386
Cow position: chr11:70303871-70304239 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 255
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 17, 26

Conread position: 6-202
Cow position: chr11:36301290-36301096 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 161
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 16, 76

Conread position: 6-216
Cow position: chr11:71455578-71455788 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 16, 88

Conread position: 6-263
Cow position: chr11:875805-875554 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 53

Conread position: 6-338
Cow position: chr11:61958959-61958627 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 87

Conread position: 6-343
Cow position: chr11:44636969-44636632 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 139, 84

Conread position: 6-375
Cow position: chr11:2907731-2907378 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 252
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 85

Conread position: 6-375
Cow position: chr11:45646803-45646440 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 245
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 24

Conread position: 6-387
Cow position: chr11:67931705-67931326 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 259
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 17, 10

Conread position: 7-164
Cow position: chr11:44818888-44819050 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 7-331
Cow position: chr11:67747073-67747390 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 16, 85

Conread position: 8-375
Cow position: chr11:71493068-71492709 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 15, 86

Conread position: 9-352
Cow position: chr11:9463622-9463967 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 161

Conread position: 12-386
Cow position: chr11:68912939-68913307 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 254
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 47

Conread position: 12-386
Cow position: chr11:70601026-70600663 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 251
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 131, 81

Conread position: 14-127
Cow position: chr11:6620492-6620378 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 14-143
Cow position: chr11:27910891-27911014 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 9, 19

Conread position: 14-334
Cow position: chr11:70609586-70609912 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 223
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 16

Conread position: 14-338
Cow position: chr11:72375890-72375558 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 84

Conread position: 14-358
Cow position: chr11:27913073-27913421 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 235
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 19

Conread position: 14-374
Cow position: chr11:31417232-31417575 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 8, 17

Conread position: 14-386
Cow position: chr11:38334313-38334685 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 258
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 8, 156

Conread position: 15-318
Cow position: chr11:34113062-34113363 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 74

Conread position: 16-321
Cow position: chr11:41809677-41809392 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 206
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 66

Conread position: 18-335
Cow position: chr11:4323154-4323473 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 210
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 10, 76

Conread position: 19-263
Cow position: chr11:30596785-30597036 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 35

Conread position: 20-328
Cow position: chr11:79960986-79960677 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 201
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 122, 73

Conread position: 20-386
Cow position: chr11:6245115-6245485 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 254
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 31

Conread position: 21-217
Cow position: chr11:38071160-38071358 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 124, 61

Conread position: 21-323
Cow position: chr11:80761577-80761275 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 121, 59

Conread position: 21-338
Cow position: chr11:48649784-48650090 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 50, 13

Conread position: 21-338
Cow position: chr11:55052688-55052991 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 13, 74

Conread position: 21-384
Cow position: chr11:3702754-3703114 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 228
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 121, 45

Conread position: 22-318
Cow position: chr11:18572611-18572898 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 198
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 121, 32

Conread position: 22-384
Cow position: chr11:83397704-83398069 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 250
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 65, 157

Conread position: 23-386
Cow position: chr11:13592542-13592903 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 119, 71

Conread position: 23-386
Cow position: chr11:74316519-74316870 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 234
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 122, 31

Conread position: 24-385
Cow position: chr11:20684770-20684407 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 244
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 115, 145

Conread position: 26-368
Cow position: chr11:83925855-83926186 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 12

Conread position: 31-388
Cow position: chr11:80923510-80923160 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 111, 59

Conread position: 32-325
Cow position: chr11:70086140-70086437 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 61, 5

Conread position: 33-291
Cow position: chr11:7497829-7497576 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 109, 15

Conread position: 33-310
Cow position: chr11:49934925-49934641 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 34, 63

Conread position: 33-311
Cow position: chr11:35874176-35873912 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 127, 48

Conread position: 33-322
Cow position: chr11:1157460-1157744 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 114, 58

Conread position: 33-325
Cow position: chr11:15373667-15373944 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 58

Conread position: 33-331
Cow position: chr11:68207023-68206731 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 196
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 205, 57

Conread position: 33-386
Cow position: chr11:2917770-2917429 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 111, 57

Conread position: 33-386
Cow position: chr11:48383345-48383694 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 110, 27

Conread position: 33-386
Cow position: chr11:66572685-66572328 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 229
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 112, 12

Conread position: 33-387
Cow position: chr11:3920490-3920138 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 226
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 129, 117

Conread position: 34-202
Cow position: chr11:43914033-43914197 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 109, 26

Conread position: 34-208
Cow position: chr11:9088486-9088316 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 109, 11

Conread position: 34-215
Cow position: chr11:81614822-81614645 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 34-216
Cow position: chr11:48042223-48042039 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 59, 136

Conread position: 34-225
Cow position: chr11:10076584-10076773 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 104, 16

Conread position: 34-225
Cow position: chr11:57171010-57170825 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 103, 16

Conread position: 34-309
Cow position: chr11:64638712-64638437 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 21

Conread position: 34-318
Cow position: chr11:26483530-26483803 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 109, 57

Conread position: 34-326
Cow position: chr11:2932969-2933252 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 110, 47

Conread position: 34-326
Cow position: chr11:48474519-48474809 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 109, 57

Conread position: 34-327
Cow position: chr11:17227829-17227538 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 132, 56

Conread position: 34-336
Cow position: chr11:80530182-80530476 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 204
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 143

Conread position: 34-337
Cow position: chr11:30954815-30955117 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 108, 59

Conread position: 34-338
Cow position: chr11:36848743-36849035 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 205
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 111, 58

Conread position: 34-386
Cow position: chr11:14470186-14470525 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 229
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 103, 47

Conread position: 34-388
Cow position: chr11:78381235-78380903 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 91, 26

Conread position: 35-321
Cow position: chr11:40573516-40573235 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 39, 56

Conread position: 37-351
Cow position: chr11:83687608-83687304 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 106, 23

Conread position: 37-383
Cow position: chr11:38670502-38670851 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 246
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 102, 54

Conread position: 38-181
Cow position: chr11:16233115-16232979 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 38-202
Cow position: chr11:9837281-9837116 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 105, 55

Conread position: 38-310
Cow position: chr11:71008957-71009213 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 143, 7

Conread position: 38-365
Cow position: chr11:71868788-71868460 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 91

Conread position: 38-374
Cow position: chr11:26144278-26143942 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 139

Conread position: 38-386
Cow position: chr11:45282748-45283091 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 239
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 98, 55

Conread position: 40-386
Cow position: chr11:63435337-63435686 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 244
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 23, 53

Conread position: 41-208
Cow position: chr11:81605451-81605617 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 54

Conread position: 41-215
Cow position: chr11:59156055-59155882 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 49

Conread position: 41-230
Cow position: chr11:33468536-33468720 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 10

Conread position: 41-323
Cow position: chr11:77118535-77118802 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 79, 15

Conread position: 41-326
Cow position: chr11:71501311-71501028 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 13

Conread position: 41-385
Cow position: chr11:7873971-7874303 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 226
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 102, 50

Conread position: 41-386
Cow position: chr11:1625394-1625058 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 104, 52

Conread position: 42-256
Cow position: chr11:67136615-67136395 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 74

Conread position: 42-308
Cow position: chr11:3833528-3833276 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 38

Conread position: 42-374
Cow position: chr11:30830791-30830466 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 103, 49

Conread position: 42-386
Cow position: chr11:28993904-28993584 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 232
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 19

Conread position: 42-386
Cow position: chr11:37804730-37804388 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 49

Conread position: 43-225
Cow position: chr11:15525779-15525972 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 50, 91

Conread position: 43-375
Cow position: chr11:74380020-74380344 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 219
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 80, 99

Conread position: 43-388
Cow position: chr11:18509193-18508863 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 77, 38

Conread position: 43-390
Cow position: chr11:1380507-1380845 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 233
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 182, 34

Conread position: 44-282
Cow position: chr11:53511908-53512144 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 48

Conread position: 44-319
Cow position: chr11:20602055-20602325 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 134, 11

Conread position: 44-375
Cow position: chr11:76889875-76890200 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 101, 47

Conread position: 44-383
Cow position: chr11:8545186-8544855 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 238
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 97, 47

Conread position: 44-386
Cow position: chr11:2083963-2084309 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 130

Conread position: 44-386
Cow position: chr11:67600609-67600942 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 230
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 99, 48

Conread position: 45-297
Cow position: chr11:41176122-41175871 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 45

Conread position: 45-384
Cow position: chr11:77319240-77319574 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 220
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 103, 45

Conread position: 45-386
Cow position: chr11:59862040-59862374 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 225
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 97, 70

Conread position: 46-326
Cow position: chr11:16907214-16906945 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 99, 43

Conread position: 46-365
Cow position: chr11:30209992-30209678 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 99, 34

Conread position: 48-319
Cow position: chr11:3419241-3418985 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 48-386
Cow position: chr11:66289390-66289717 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 216
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 50-326
Cow position: chr11:40479022-40478747 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 30, 117

Conread position: 52-352
Cow position: chr11:32693637-32693355 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 197
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 53-176
Cow position: chr11:63499488-63499363 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 39

Conread position: 53-324
Cow position: chr11:51729124-51729390 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 94, 37

Conread position: 53-331
Cow position: chr11:7460782-7460503 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 6, 11

Conread position: 54-385
Cow position: chr11:48295869-48296188 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 223
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 36

Conread position: 55-168
Cow position: chr11:29786768-29786654 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 16

Conread position: 55-213
Cow position: chr11:65843256-65843101 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 54

Conread position: 55-325
Cow position: chr11:80756946-80756676 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 87, 37

Conread position: 55-365
Cow position: chr11:17493316-17493626 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 206
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 35

Conread position: 57-386
Cow position: chr11:49148876-49149210 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 88, 115

Conread position: 58-326
Cow position: chr11:71390723-71390460 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 179
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 35

Conread position: 59-355
Cow position: chr11:6202288-6202581 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 201
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 33

Conread position: 60-311
Cow position: chr11:55494522-55494770 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 33

Conread position: 60-335
Cow position: chr11:39118591-39118874 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 127

Conread position: 65-385
Cow position: chr11:32254371-32254053 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 221
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 77, 27

Conread position: 69-302
Cow position: chr11:52983528-52983757 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 41

Conread position: 69-312
Cow position: chr11:67246644-67246877 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 74, 24

Conread position: 69-359
Cow position: chr11:61560774-61560488 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 73, 46

Conread position: 69-382
Cow position: chr11:40794502-40794191 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 204
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 90

Conread position: 69-385
Cow position: chr11:21422084-21421775 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 211
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 73, 22

Conread position: 73-331
Cow position: chr11:48659780-48660045 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 129

Conread position: 73-334
Cow position: chr11:70756333-70756592 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 15, 100

Conread position: 73-335
Cow position: chr11:84228858-84228602 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 21

Conread position: 76-365
Cow position: chr11:53462801-53463085 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 189
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 67, 16

Conread position: 79-341
Cow position: chr11:59024495-59024239 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 260, 62

Conread position: 80-387
Cow position: chr11:29308442-29308747 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 200
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 33

Conread position: 84-326
Cow position: chr11:70278244-70278007 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 88

Conread position: 84-342
Cow position: chr11:52690658-52690400 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 59, 81

Conread position: 84-386
Cow position: chr11:13864234-13863938 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 196
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 40

Conread position: 85-321
Cow position: chr11:49057267-49057492 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 93

Conread position: 86-385
Cow position: chr11:40395304-40395599 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 203
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 74

Conread position: 87-326
Cow position: chr11:71807704-71807461 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 77

Conread position: 87-388
Cow position: chr11:50472182-50472484 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 33, 78

Conread position: 88-386
Cow position: chr11:1067575-1067274 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 195
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 12, 46

Conread position: 93-337
Cow position: chr11:11994832-11994595 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 51, 11

Conread position: 93-388
Cow position: chr11:40608724-40608427 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 203
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 148

Conread position: 94-326
Cow position: chr11:33345317-33345551 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 51, 83

Conread position: 94-386
Cow position: chr11:81168158-81167867 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 196
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 109

Conread position: 95-337
Cow position: chr11:41293944-41293701 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 75

Conread position: 98-365
Cow position: chr11:53510620-53510358 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 17

Conread position: 113-388
Cow position: chr11:39060707-39060439 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 7

Conread position: 116-386
Cow position: chr11:80413116-80412845 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 52

Conread position: 119-386
Cow position: chr11:16314771-16315038 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 43

Conread position: 121-365
Cow position: chr11:53816759-53816998 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 32

Conread position: 121-386
Cow position: chr11:8669916-8670181 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 17

Conread position: 123-382
Cow position: chr11:30370010-30370262 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 19, 54

Conread position: 125-375
Cow position: chr11:62813045-62812799 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 197, 0

Conread position: 142-388
Cow position: chr11:35926982-35926743 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 32

Conread position: 143-388
Cow position: chr11:29677121-29677373 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 59

Conread position: 151-349
Cow position: chr11:76835697-76835496 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 23

Conread position: 157-390
Cow position: chr11:3714760-3714990 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 154
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 63

Conread position: 164-390
Cow position: chr11:62889950-62889724 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 26, 34

Conread position: 177-386
Cow position: chr11:43914250-43914457 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 198-386
Cow position: chr11:25783690-25783879 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 166, 0

Conread position: 200-386
Cow position: chr11:46884353-46884539 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 125
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.