Cow genome map

Conread name: Blo1-PBL010051H09

Conread position: 126-252
Cow position: chr21:45300969-45300842 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 53

Conread position: 135-251
Cow position: chr21:1075365-1075482 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 45

Conread position: 202-533
Cow position: chr21:14760307-14760640 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 5

Conread position: 214-541
Cow position: chr21:40244167-40244519 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 56, 33

Conread position: 220-587
Cow position: chr21:46777234-46776880 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 248
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 47, 25

Conread position: 221-587
Cow position: chr21:37299205-37299582 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 31, 22

Conread position: 225-559
Cow position: chr21:31576258-31576588 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 244
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 22

Conread position: 227-509
Cow position: chr21:42023881-42024168 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 80, 19

Conread position: 227-545
Cow position: chr21:5238152-5238465 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 81, 19

Conread position: 227-561
Cow position: chr21:7672879-7673217 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 19

Conread position: 227-577
Cow position: chr21:2679305-2679667 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 20

Conread position: 227-585
Cow position: chr21:36795346-36795721 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 227-586
Cow position: chr21:28429196-28429563 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 20

Conread position: 227-587
Cow position: chr21:5392792-5392415 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 19

Conread position: 227-587
Cow position: chr21:16188049-16187687 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 16

Conread position: 227-587
Cow position: chr21:28734166-28733793 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 20

Conread position: 227-587
Cow position: chr21:33209945-33210308 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 19

Conread position: 227-587
Cow position: chr21:33983064-33982690 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 20

Conread position: 228-587
Cow position: chr21:27863772-27863393 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 19

Conread position: 229-586
Cow position: chr21:7582157-7581786 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 230-548
Cow position: chr21:1463985-1464311 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 55, 38

Conread position: 236-561
Cow position: chr21:8351546-8351217 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 15

Conread position: 237-564
Cow position: chr21:17174899-17175244 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 225
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 72, 263

Conread position: 239-583
Cow position: chr21:25764392-25764752 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 229

Conread position: 244-573
Cow position: chr21:36756376-36756706 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 30

Conread position: 245-539
Cow position: chr21:21480416-21480112 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 70

Conread position: 245-541
Cow position: chr21:42190404-42190097 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 72

Conread position: 245-577
Cow position: chr21:44671516-44671855 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 224

Conread position: 245-587
Cow position: chr21:6833815-6834169 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 267

Conread position: 245-587
Cow position: chr21:34391204-34390855 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 24

Conread position: 245-587
Cow position: chr21:42384271-42384628 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 273

Conread position: 246-475
Cow position: chr21:23683314-23683559 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 190
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 24, 140

Conread position: 246-500
Cow position: chr21:48484676-48484411 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 68

Conread position: 246-508
Cow position: chr21:23821932-23822210 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 21, 89

Conread position: 246-524
Cow position: chr21:40058570-40058864 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 270

Conread position: 246-531
Cow position: chr21:30990504-30990214 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 224

Conread position: 246-537
Cow position: chr21:912200-911896 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 17

Conread position: 246-547
Cow position: chr21:26829471-26829183 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 20, 31

Conread position: 246-549
Cow position: chr21:42500795-42501126 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 58

Conread position: 246-550
Cow position: chr21:8985313-8985635 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 219

Conread position: 246-550
Cow position: chr21:28881913-28882221 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 32

Conread position: 246-553
Cow position: chr21:13897957-13898274 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 67

Conread position: 246-559
Cow position: chr21:47823503-47823176 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 32

Conread position: 246-561
Cow position: chr21:24796270-24795934 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 237
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 39, 12

Conread position: 246-561
Cow position: chr21:32535742-32536071 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 24

Conread position: 246-563
Cow position: chr21:26648240-26647912 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 24, 69

Conread position: 246-573
Cow position: chr21:2904698-2904372 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 242
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 21, 134

Conread position: 246-580
Cow position: chr21:44826111-44825777 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 25, 10

Conread position: 246-583
Cow position: chr21:37479723-37480070 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 39, 228

Conread position: 246-584
Cow position: chr21:19439227-19439582 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 230
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 213

Conread position: 246-585
Cow position: chr21:641348-641705 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 113

Conread position: 246-585
Cow position: chr21:42414335-42413979 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 210

Conread position: 246-586
Cow position: chr21:725126-724766 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 41

Conread position: 246-586
Cow position: chr21:10263805-10264152 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 71

Conread position: 246-587
Cow position: chr21:4080118-4080468 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 79

Conread position: 246-587
Cow position: chr21:4282099-4281755 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 38

Conread position: 246-587
Cow position: chr21:4399564-4399923 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 42

Conread position: 246-587
Cow position: chr21:4998721-4998375 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 74

Conread position: 246-587
Cow position: chr21:5636957-5636600 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 259

Conread position: 246-587
Cow position: chr21:5649670-5650023 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 22, 89

Conread position: 246-587
Cow position: chr21:6713774-6713403 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 224

Conread position: 246-587
Cow position: chr21:7564558-7564187 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 89

Conread position: 246-587
Cow position: chr21:12366151-12366491 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 21, 194

Conread position: 246-587
Cow position: chr21:15976405-15976753 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 108

Conread position: 246-587
Cow position: chr21:22719016-22718664 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 149

Conread position: 246-587
Cow position: chr21:29015125-29014791 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 146

Conread position: 246-587
Cow position: chr21:32237064-32237399 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 256

Conread position: 246-587
Cow position: chr21:33729197-33729550 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 213

Conread position: 246-587
Cow position: chr21:36762817-36763181 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 118

Conread position: 246-587
Cow position: chr21:38120867-38121221 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 225

Conread position: 246-587
Cow position: chr21:44252064-44251723 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 150

Conread position: 246-587
Cow position: chr21:44565941-44565602 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 124

Conread position: 246-587
Cow position: chr21:45971394-45971054 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 147

Conread position: 247-484
Cow position: chr21:23478952-23478697 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 40

Conread position: 247-533
Cow position: chr21:15445314-15445001 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 149

Conread position: 247-554
Cow position: chr21:3236297-3236613 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 69

Conread position: 247-561
Cow position: chr21:10514577-10514900 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 37

Conread position: 247-587
Cow position: chr21:9940413-9940068 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 250
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 26

Conread position: 247-587
Cow position: chr21:13048431-13048073 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 271

Conread position: 247-587
Cow position: chr21:20160449-20160796 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 186

Conread position: 247-587
Cow position: chr21:23322316-23321958 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 68

Conread position: 247-587
Cow position: chr21:41878241-41878591 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 110

Conread position: 248-531
Cow position: chr21:18494741-18495036 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 30

Conread position: 248-587
Cow position: chr21:10727047-10727397 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 262

Conread position: 248-587
Cow position: chr21:34010624-34010276 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 126

Conread position: 250-486
Cow position: chr21:17434551-17434296 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 250-545
Cow position: chr21:13751156-13751471 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 250-582
Cow position: chr21:46829496-46829157 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 42, 25

Conread position: 251-481
Cow position: chr21:42348909-42348657 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 251-490
Cow position: chr21:34658803-34659060 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 19, 0

Conread position: 251-507
Cow position: chr21:7132689-7132424 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 34, 17

Conread position: 251-541
Cow position: chr21:17412523-17412221 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 16, 126

Conread position: 251-542
Cow position: chr21:17479153-17479449 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 18, 57

Conread position: 251-545
Cow position: chr21:42913977-42913665 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 264

Conread position: 251-547
Cow position: chr21:27743510-27743829 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 99

Conread position: 251-554
Cow position: chr21:16612398-16612712 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 203

Conread position: 251-561
Cow position: chr21:13089710-13089374 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 229

Conread position: 251-585
Cow position: chr21:33997452-33997109 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 17

Conread position: 251-585
Cow position: chr21:39401369-39401709 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 64

Conread position: 251-587
Cow position: chr21:81839-82187 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 268

Conread position: 251-587
Cow position: chr21:395647-395987 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 40

Conread position: 251-587
Cow position: chr21:937821-938139 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 35, 66

Conread position: 251-587
Cow position: chr21:23801352-23801008 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 38

Conread position: 251-587
Cow position: chr21:27124359-27124001 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 20, 208

Conread position: 252-506
Cow position: chr21:9278138-9278423 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 254-559
Cow position: chr21:41155638-41155957 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 236
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 31, 14

Conread position: 254-584
Cow position: chr21:43357485-43357139 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 59

Conread position: 254-587
Cow position: chr21:28512309-28512634 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 31

Conread position: 255-572
Cow position: chr21:40168835-40168520 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 15, 60

Conread position: 257-557
Cow position: chr21:5455211-5454901 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 13, 62

Conread position: 257-560
Cow position: chr21:4189609-4189934 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 13, 248

Conread position: 257-587
Cow position: chr21:4905192-4904847 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 252
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 13, 47

Conread position: 257-587
Cow position: chr21:27341819-27341475 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 265

Conread position: 258-563
Cow position: chr21:28626017-28626337 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 81

Conread position: 264-567
Cow position: chr21:32665989-32665676 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 14, 61

Conread position: 266-586
Cow position: chr21:44114340-44114011 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 33, 46

Conread position: 268-583
Cow position: chr21:24698277-24698597 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 139

Conread position: 269-557
Cow position: chr21:19977123-19977425 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 16

Conread position: 272-587
Cow position: chr21:15584610-15584299 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 40

Conread position: 273-587
Cow position: chr21:23568003-23568348 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 39, 229

Conread position: 274-397
Cow position: chr21:17433460-17433335 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 274-587
Cow position: chr21:19258621-19258938 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 183

Conread position: 275-530
Cow position: chr21:10882232-10882506 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 9

Conread position: 275-586
Cow position: chr21:23586674-23587001 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 9

Conread position: 279-584
Cow position: chr21:24222736-24222420 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 5

Conread position: 279-586
Cow position: chr21:3763936-3763623 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 22

Conread position: 279-587
Cow position: chr21:22860804-22861122 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 5

Conread position: 279-587
Cow position: chr21:33791566-33791261 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 28, 9

Conread position: 280-585
Cow position: chr21:10005083-10004768 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 111

Conread position: 283-568
Cow position: chr21:31277626-31277911 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 52

Conread position: 283-587
Cow position: chr21:42841786-42841477 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 28

Conread position: 284-513
Cow position: chr21:46973321-46973086 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 25, 222

Conread position: 284-540
Cow position: chr21:42145722-42145992 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 152

Conread position: 284-549
Cow position: chr21:24765090-24765364 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 222
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 66, 113

Conread position: 284-550
Cow position: chr21:21077135-21077409 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 20, 91

Conread position: 284-554
Cow position: chr21:35569578-35569296 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 27

Conread position: 284-559
Cow position: chr21:5596952-5597244 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 233

Conread position: 284-559
Cow position: chr21:35061894-35062179 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 159

Conread position: 284-563
Cow position: chr21:31253341-31253633 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 28, 224

Conread position: 284-586
Cow position: chr21:1591357-1591673 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 27

Conread position: 284-586
Cow position: chr21:3818022-3818328 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 118

Conread position: 284-587
Cow position: chr21:11645163-11644846 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 284-587
Cow position: chr21:18780164-18779856 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 29

Conread position: 284-587
Cow position: chr21:25382815-25383146 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 63

Conread position: 284-587
Cow position: chr21:27521519-27521220 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 27

Conread position: 284-587
Cow position: chr21:27569352-27569053 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 89, 27

Conread position: 284-587
Cow position: chr21:34653890-34654193 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 38

Conread position: 284-587
Cow position: chr21:41620925-41621245 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 237

Conread position: 284-587
Cow position: chr21:44515080-44515384 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 109

Conread position: 284-587
Cow position: chr21:46849317-46849008 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 173

Conread position: 285-554
Cow position: chr21:12961092-12960812 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 92, 26

Conread position: 285-584
Cow position: chr21:8420461-8420743 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 22, 70

Conread position: 285-585
Cow position: chr21:41579558-41579874 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 27

Conread position: 285-586
Cow position: chr21:38449645-38449330 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 237

Conread position: 285-587
Cow position: chr21:33528-33839 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 221

Conread position: 285-587
Cow position: chr21:8618081-8618384 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 235
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 223

Conread position: 285-587
Cow position: chr21:18940750-18940460 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 112, 28

Conread position: 285-587
Cow position: chr21:40133962-40134277 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 232

Conread position: 286-489
Cow position: chr21:9998913-9998692 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 69

Conread position: 286-581
Cow position: chr21:33727653-33727347 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 227

Conread position: 286-585
Cow position: chr21:8206598-8206890 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 70

Conread position: 286-585
Cow position: chr21:19363658-19363341 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 286-585
Cow position: chr21:45850902-45850589 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 106, 294

Conread position: 286-587
Cow position: chr21:41597623-41597931 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 219

Conread position: 286-587
Cow position: chr21:45330800-45330487 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 26, 227

Conread position: 287-510
Cow position: chr21:28944555-28944320 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 210

Conread position: 287-587
Cow position: chr21:5426755-5427060 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 23

Conread position: 287-587
Cow position: chr21:30849130-30848821 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 51

Conread position: 288-587
Cow position: chr21:13365151-13365462 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 232

Conread position: 289-547
Cow position: chr21:2785966-2785696 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 89, 22

Conread position: 289-547
Cow position: chr21:5137680-5137407 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 202

Conread position: 289-563
Cow position: chr21:3813672-3813387 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 182

Conread position: 289-586
Cow position: chr21:18850408-18850105 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 88

Conread position: 289-587
Cow position: chr21:28923937-28924229 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 236
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 18, 41

Conread position: 289-587
Cow position: chr21:47764301-47763997 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 214

Conread position: 290-561
Cow position: chr21:6102457-6102167 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 21, 173

Conread position: 290-585
Cow position: chr21:12801932-12801629 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 21

Conread position: 290-587
Cow position: chr21:40589671-40589362 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 143

Conread position: 290-587
Cow position: chr21:47465309-47464998 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 23, 73

Conread position: 291-587
Cow position: chr21:18845202-18844892 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 24, 48

Conread position: 293-585
Cow position: chr21:30607273-30606969 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 218

Conread position: 294-555
Cow position: chr21:37361654-37361376 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 294-567
Cow position: chr21:15610971-15611244 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 81, 18

Conread position: 294-587
Cow position: chr21:37345286-37344981 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 22

Conread position: 295-416
Cow position: chr21:1510890-1511018 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 295-587
Cow position: chr21:28190845-28191152 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 17, 97

Conread position: 295-587
Cow position: chr21:46143760-46144079 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 17, 222

Conread position: 296-561
Cow position: chr21:15911218-15911497 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 296-587
Cow position: chr21:48176644-48176940 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 14, 207

Conread position: 297-538
Cow position: chr21:31038668-31038414 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 220

Conread position: 297-557
Cow position: chr21:39450349-39450071 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 80, 221

Conread position: 297-587
Cow position: chr21:802475-802197 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 105

Conread position: 298-587
Cow position: chr21:17183741-17184037 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 300-563
Cow position: chr21:8235722-8235459 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 99, 77

Conread position: 301-552
Cow position: chr21:49662294-49662036 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 12, 128

Conread position: 301-559
Cow position: chr21:18790733-18790470 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 208

Conread position: 303-587
Cow position: chr21:32339912-32339620 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 211

Conread position: 306-587
Cow position: chr21:27146163-27145872 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 72, 196

Conread position: 307-577
Cow position: chr21:19937103-19936810 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 71, 142

Conread position: 308-587
Cow position: chr21:21169664-21169376 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 64, 211

Conread position: 310-482
Cow position: chr21:6765713-6765898 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 81

Conread position: 310-587
Cow position: chr21:28244309-28244590 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 10

Conread position: 311-561
Cow position: chr21:10000914-10001169 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 41

Conread position: 311-567
Cow position: chr21:28211030-28211295 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 67, 126

Conread position: 312-587
Cow position: chr21:18065089-18064794 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 167

Conread position: 316-547
Cow position: chr21:28617429-28617671 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 27

Conread position: 316-587
Cow position: chr21:27624551-27624818 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 54, 22

Conread position: 320-559
Cow position: chr21:45439407-45439144 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 320-562
Cow position: chr21:28989455-28989705 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 57, 154

Conread position: 321-585
Cow position: chr21:17690043-17690312 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 29, 34

Conread position: 322-586
Cow position: chr21:10633796-10633521 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 255

Conread position: 323-587
Cow position: chr21:24642364-24642640 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 190

Conread position: 331-561
Cow position: chr21:18041989-18041753 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 66, 41

Conread position: 332-587
Cow position: chr21:957521-957792 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 5, 124

Conread position: 332-587
Cow position: chr21:19673669-19673926 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 164

Conread position: 333-587
Cow position: chr21:35354393-35354651 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 25

Conread position: 334-574
Cow position: chr21:32904287-32904047 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 31

Conread position: 334-587
Cow position: chr21:42007603-42007342 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 60, 179

Conread position: 336-586
Cow position: chr21:29978903-29978641 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 41, 6

Conread position: 337-587
Cow position: chr21:11250725-11250989 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 181

Conread position: 339-556
Cow position: chr21:2293854-2294072 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 167

Conread position: 339-587
Cow position: chr21:12462109-12461847 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 179

Conread position: 340-544
Cow position: chr21:39809762-39809971 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 37, 98

Conread position: 341-555
Cow position: chr21:34736894-34737118 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 84

Conread position: 341-587
Cow position: chr21:17875332-17875073 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 169

Conread position: 342-587
Cow position: chr21:20260456-20260199 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 163

Conread position: 350-539
Cow position: chr21:4568161-4568357 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 10, 90

Conread position: 350-586
Cow position: chr21:2810271-2810043 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 151, 52

Conread position: 355-587
Cow position: chr21:30835251-30835483 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 60, 24

Conread position: 360-584
Cow position: chr21:10561697-10561466 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 37, 150

Conread position: 364-587
Cow position: chr21:12301608-12301391 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 8

Conread position: 365-587
Cow position: chr21:18414943-18415172 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 5

Conread position: 368-586
Cow position: chr21:11740215-11740000 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 17, 28

Conread position: 370-539
Cow position: chr21:9980067-9979898 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 49

Conread position: 370-587
Cow position: chr21:28919618-28919403 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 49, 15

Conread position: 370-587
Cow position: chr21:40192389-40192184 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 371-561
Cow position: chr21:5985414-5985224 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 26

Conread position: 371-587
Cow position: chr21:18155666-18155446 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 14, 30

Conread position: 377-581
Cow position: chr21:6017526-6017739 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 8, 23

Conread position: 377-585
Cow position: chr21:25629004-25628792 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 170
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 116

Conread position: 377-587
Cow position: chr21:46552198-46551983 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 22, 12

Conread position: 379-587
Cow position: chr21:10410132-10410342 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 35, 6

Conread position: 386-577
Cow position: chr21:30256351-30256159 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 119

Conread position: 387-587
Cow position: chr21:40432369-40432565 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 33, 83

Conread position: 390-587
Cow position: chr21:297674-297874 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 63

Conread position: 391-587
Cow position: chr21:17890228-17890422 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 103

Conread position: 395-587
Cow position: chr21:6997870-6998067 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 8, 104

Conread position: 396-587
Cow position: chr21:44214053-44214246 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 26, 107

Conread position: 399-561
Cow position: chr21:19210646-19210808 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 101

Conread position: 399-563
Cow position: chr21:1511223-1511389 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 103

Conread position: 399-566
Cow position: chr21:32453779-32453935 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 40

Conread position: 399-577
Cow position: chr21:13495472-13495653 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 97

Conread position: 399-583
Cow position: chr21:33360102-33359925 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 21, 93

Conread position: 399-585
Cow position: chr21:37014471-37014288 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 20, 80

Conread position: 399-587
Cow position: chr21:36789729-36789915 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 32

Conread position: 399-587
Cow position: chr21:40266053-40266241 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 18, 106

Conread position: 401-570
Cow position: chr21:34727306-34727132 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 16

Conread position: 401-587
Cow position: chr21:20418751-20418562 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 19, 87

Conread position: 401-587
Cow position: chr21:22210310-22210126 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 28

Conread position: 402-587
Cow position: chr21:15544283-15544109 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 96

Conread position: 412-587
Cow position: chr21:36910687-36910861 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 75

Conread position: 413-530
Cow position: chr21:14228622-14228504 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 86

Conread position: 413-561
Cow position: chr21:22720176-22720322 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 413-573
Cow position: chr21:5612058-5612214 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 413-585
Cow position: chr21:977195-977030 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 13

Conread position: 413-587
Cow position: chr21:868977-868804 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 6, 64

Conread position: 413-587
Cow position: chr21:7377981-7377806 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 7, 89

Conread position: 413-587
Cow position: chr21:16152385-16152561 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 89, 0

Conread position: 413-587
Cow position: chr21:17929889-17929717 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 413-587
Cow position: chr21:47714055-47713888 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 6, 33

Conread position: 414-587
Cow position: chr21:37790051-37789879 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 5, 75

Conread position: 415-587
Cow position: chr21:471628-471796 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 418-580
Cow position: chr21:19513819-19513978 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 114, 78

Conread position: 418-587
Cow position: chr21:9302473-9302307 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 418-587
Cow position: chr21:19060133-19059973 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 418-587
Cow position: chr21:47363784-47363614 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 129, 82

Conread position: 422-587
Cow position: chr21:5464705-5464868 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 427-587
Cow position: chr21:42209668-42209509 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 428-587
Cow position: chr21:10883960-10883802 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 430-584
Cow position: chr21:734562-734707 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 434-583
Cow position: chr21:20165611-20165757 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 439-587
Cow position: chr21:10538275-10538135 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 439-587
Cow position: chr21:38720227-38720370 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 441-587
Cow position: chr21:37235362-37235505 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 445-587
Cow position: chr21:31159384-31159517 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 449-585
Cow position: chr21:12559682-12559817 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 453-587
Cow position: chr21:13588750-13588880 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 46

Conread position: 459-583
Cow position: chr21:46132570-46132690 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 459-587
Cow position: chr21:7768429-7768558 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 0

Show alignments to all cow chromosomes.