Cow genome map

Conread name: Blo1-PBL010051H09

Conread position: 129-251
Cow position: chrX:21971749-21971871 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 51

Conread position: 188-547
Cow position: chrX:14924671-14925043 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 26

Conread position: 213-587
Cow position: chrX:14599228-14599616 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 86

Conread position: 214-561
Cow position: chrX:7718552-7718906 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 29

Conread position: 220-542
Cow position: chrX:41790738-41790405 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 50, 23

Conread position: 220-586
Cow position: chrX:34376655-34377024 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 257
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 126

Conread position: 221-501
Cow position: chrX:11806313-11806014 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 20

Conread position: 221-559
Cow position: chrX:30162700-30163055 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 250
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 49, 22

Conread position: 222-587
Cow position: chrX:38218422-38218797 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 24

Conread position: 223-557
Cow position: chrX:25713504-25713849 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 92

Conread position: 223-587
Cow position: chrX:26441075-26440702 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 23

Conread position: 224-572
Cow position: chrX:1810455-1810092 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 23

Conread position: 224-587
Cow position: chrX:13912786-13913158 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 266
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 47, 17

Conread position: 225-587
Cow position: chrX:34454376-34454740 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 27, 18

Conread position: 225-587
Cow position: chrX:34502630-34503003 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 22

Conread position: 226-558
Cow position: chrX:28105628-28105972 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 22, 275

Conread position: 226-587
Cow position: chrX:5872024-5872400 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 19

Conread position: 227-420
Cow position: chrX:29049684-29049880 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 25, 16

Conread position: 227-490
Cow position: chrX:15485916-15485635 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 19

Conread position: 227-512
Cow position: chrX:35609695-35610000 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 19

Conread position: 227-544
Cow position: chrX:47379758-47379427 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 238
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 52, 16

Conread position: 227-581
Cow position: chrX:25232295-25232670 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 18

Conread position: 227-587
Cow position: chrX:23564088-23563708 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 16

Conread position: 227-587
Cow position: chrX:25035677-25035299 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 272
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 8, 26

Conread position: 227-587
Cow position: chrX:28134058-28134422 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 19

Conread position: 227-587
Cow position: chrX:30133615-30133235 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 20

Conread position: 227-587
Cow position: chrX:31489221-31489603 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 20

Conread position: 227-587
Cow position: chrX:34532240-34532603 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 16

Conread position: 227-587
Cow position: chrX:35224011-35224379 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 19

Conread position: 227-587
Cow position: chrX:38936408-38936783 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 16

Conread position: 227-587
Cow position: chrX:40481163-40480789 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 23

Conread position: 227-587
Cow position: chrX:40557967-40557596 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 16

Conread position: 227-587
Cow position: chrX:41122781-41123142 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 16

Conread position: 228-585
Cow position: chrX:30338209-30337877 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 9, 19

Conread position: 230-568
Cow position: chrX:37836300-37836650 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 17

Conread position: 231-507
Cow position: chrX:32020408-32020113 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 36

Conread position: 232-563
Cow position: chrX:47191683-47191347 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 16, 58

Conread position: 232-587
Cow position: chrX:27432201-27431835 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 15

Conread position: 236-585
Cow position: chrX:17631081-17630722 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 39

Conread position: 237-547
Cow position: chrX:40647696-40648029 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 287

Conread position: 239-395
Cow position: chrX:12096527-12096367 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 241-587
Cow position: chrX:7496971-7497326 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 246
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 45, 27

Conread position: 244-490
Cow position: chrX:24424668-24424399 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 26, 0

Conread position: 245-535
Cow position: chrX:25419434-25419123 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 31, 149

Conread position: 245-550
Cow position: chrX:8899750-8900073 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 254

Conread position: 245-587
Cow position: chrX:31729184-31729525 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 70

Conread position: 245-587
Cow position: chrX:44054531-44054885 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 259

Conread position: 246-505
Cow position: chrX:35388180-35387900 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 24, 268

Conread position: 246-538
Cow position: chrX:38439200-38439515 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 153

Conread position: 246-541
Cow position: chrX:45412925-45412624 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 35, 22

Conread position: 246-544
Cow position: chrX:12115768-12116087 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 239
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 24, 35

Conread position: 246-547
Cow position: chrX:18999625-18999931 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 70

Conread position: 246-549
Cow position: chrX:28157212-28157543 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 159

Conread position: 246-550
Cow position: chrX:20751994-20752301 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 32

Conread position: 246-555
Cow position: chrX:5017679-5017360 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 40

Conread position: 246-555
Cow position: chrX:27516260-27516581 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 254

Conread position: 246-556
Cow position: chrX:27442825-27442504 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 241
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 39, 94

Conread position: 246-556
Cow position: chrX:42874705-42875035 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 276

Conread position: 246-560
Cow position: chrX:35041949-35042274 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 39, 272

Conread position: 246-561
Cow position: chrX:19188663-19188988 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 259

Conread position: 246-561
Cow position: chrX:21593013-21593344 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 270

Conread position: 246-561
Cow position: chrX:42994341-42994670 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 113

Conread position: 246-563
Cow position: chrX:33466344-33466666 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 61

Conread position: 246-564
Cow position: chrX:40648393-40648710 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 216
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 40, 128

Conread position: 246-567
Cow position: chrX:34990768-34991098 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 24, 81

Conread position: 246-574
Cow position: chrX:25337904-25338258 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 197

Conread position: 246-578
Cow position: chrX:28847149-28846819 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 253

Conread position: 246-580
Cow position: chrX:44192715-44192371 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 23, 102

Conread position: 246-583
Cow position: chrX:34565027-34565365 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 77

Conread position: 246-585
Cow position: chrX:1616324-1615962 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 277

Conread position: 246-585
Cow position: chrX:27446418-27446767 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 265

Conread position: 246-585
Cow position: chrX:34238448-34238800 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 211

Conread position: 246-586
Cow position: chrX:18695194-18694849 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 244

Conread position: 246-586
Cow position: chrX:29289303-29289660 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 271

Conread position: 246-586
Cow position: chrX:41238636-41238273 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 69

Conread position: 246-587
Cow position: chrX:2300658-2301008 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 25, 183

Conread position: 246-587
Cow position: chrX:7645985-7646334 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 218

Conread position: 246-587
Cow position: chrX:8730806-8731176 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 349

Conread position: 246-587
Cow position: chrX:8796977-8797332 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 279

Conread position: 246-587
Cow position: chrX:10412259-10411903 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 78

Conread position: 246-587
Cow position: chrX:10866140-10865792 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 270

Conread position: 246-587
Cow position: chrX:11614448-11614776 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 110

Conread position: 246-587
Cow position: chrX:13648057-13647702 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 237

Conread position: 246-587
Cow position: chrX:21227199-21227543 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 229
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 137

Conread position: 246-587
Cow position: chrX:27705320-27705669 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 69

Conread position: 246-587
Cow position: chrX:30543555-30543201 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 56

Conread position: 246-587
Cow position: chrX:31294813-31294489 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 42

Conread position: 246-587
Cow position: chrX:31949204-31948852 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 215

Conread position: 246-587
Cow position: chrX:37232139-37232490 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 265

Conread position: 246-587
Cow position: chrX:38007041-38006687 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 263
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 24, 264

Conread position: 246-587
Cow position: chrX:40269203-40269575 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 246-587
Cow position: chrX:41879204-41878851 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 69

Conread position: 246-587
Cow position: chrX:42171569-42171211 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 276

Conread position: 246-587
Cow position: chrX:42247449-42247099 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 36

Conread position: 246-587
Cow position: chrX:42470210-42469858 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 223

Conread position: 246-587
Cow position: chrX:42507917-42507565 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 270

Conread position: 246-587
Cow position: chrX:47344021-47344379 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 271

Conread position: 246-587
Cow position: chrX:47873614-47873253 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 102

Conread position: 246-587
Cow position: chrX:47967327-47967690 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 37

Conread position: 247-545
Cow position: chrX:9161316-9161622 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 19, 254

Conread position: 247-559
Cow position: chrX:11746573-11746902 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 10, 42

Conread position: 247-559
Cow position: chrX:28787095-28787408 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 212
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 67

Conread position: 247-586
Cow position: chrX:11082885-11082540 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 189

Conread position: 247-586
Cow position: chrX:11718052-11717701 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 68

Conread position: 247-587
Cow position: chrX:7277658-7277994 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 50

Conread position: 247-587
Cow position: chrX:12437508-12437188 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 38, 126

Conread position: 251-416
Cow position: chrX:25283408-25283238 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 17

Conread position: 251-541
Cow position: chrX:3653495-3653798 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 16, 199

Conread position: 251-559
Cow position: chrX:32743270-32743593 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 19, 188

Conread position: 251-568
Cow position: chrX:48243720-48243402 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 120

Conread position: 251-586
Cow position: chrX:15007419-15007067 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 266

Conread position: 251-586
Cow position: chrX:34441715-34441372 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 84

Conread position: 251-587
Cow position: chrX:878636-878297 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 89

Conread position: 251-587
Cow position: chrX:5638432-5638086 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 251-587
Cow position: chrX:8925438-8925782 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 258

Conread position: 251-587
Cow position: chrX:34222481-34222799 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 235
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 64

Conread position: 251-587
Cow position: chrX:45404102-45403742 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 22, 274

Conread position: 252-559
Cow position: chrX:33803283-33802948 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 274

Conread position: 252-587
Cow position: chrX:17725711-17726058 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 40

Conread position: 252-587
Cow position: chrX:38227357-38227026 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 18, 132

Conread position: 253-542
Cow position: chrX:23497924-23497628 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 10

Conread position: 254-559
Cow position: chrX:28845583-28845888 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 107

Conread position: 254-587
Cow position: chrX:19689957-19690298 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 14

Conread position: 255-585
Cow position: chrX:15147450-15147116 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 95

Conread position: 255-587
Cow position: chrX:36010156-36009829 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 60

Conread position: 257-496
Cow position: chrX:21665855-21665599 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 236

Conread position: 260-587
Cow position: chrX:20151591-20151939 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 330

Conread position: 263-583
Cow position: chrX:27509273-27508943 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 235

Conread position: 265-587
Cow position: chrX:24366080-24365738 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 20, 33

Conread position: 265-587
Cow position: chrX:28878413-28878091 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 112

Conread position: 266-574
Cow position: chrX:14973982-14973676 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 19, 41

Conread position: 266-585
Cow position: chrX:17541714-17542041 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 179

Conread position: 266-587
Cow position: chrX:40826997-40826668 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 231

Conread position: 269-485
Cow position: chrX:2648598-2648369 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 6, 0

Conread position: 269-561
Cow position: chrX:41167209-41166905 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 16

Conread position: 269-587
Cow position: chrX:35288415-35288736 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 40, 15

Conread position: 270-553
Cow position: chrX:47209124-47209395 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 13, 93

Conread position: 270-586
Cow position: chrX:41673856-41674186 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 244
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 15, 239

Conread position: 272-587
Cow position: chrX:11655842-11656164 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 230

Conread position: 274-506
Cow position: chrX:35284375-35284625 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 191
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 11, 0

Conread position: 274-529
Cow position: chrX:47232595-47232857 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 156

Conread position: 274-545
Cow position: chrX:32128220-32127951 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 11

Conread position: 275-539
Cow position: chrX:30833079-30832817 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 212
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 10, 35

Conread position: 275-582
Cow position: chrX:43567698-43567997 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 11, 110

Conread position: 277-586
Cow position: chrX:4768511-4768814 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 92

Conread position: 279-557
Cow position: chrX:40788968-40789265 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 162

Conread position: 279-587
Cow position: chrX:17662832-17662515 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 6

Conread position: 283-583
Cow position: chrX:11589824-11589509 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 93

Conread position: 284-496
Cow position: chrX:2383258-2383484 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 89, 0

Conread position: 284-506
Cow position: chrX:42282205-42282435 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 94, 18

Conread position: 284-542
Cow position: chrX:41743682-41743952 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 227

Conread position: 284-546
Cow position: chrX:47757160-47756886 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 27, 178

Conread position: 284-547
Cow position: chrX:38840657-38840927 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 146

Conread position: 284-548
Cow position: chrX:41198873-41199149 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 212
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 23, 194

Conread position: 284-561
Cow position: chrX:12249574-12249868 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 231
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 25, 77

Conread position: 284-561
Cow position: chrX:19878837-19879101 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 115, 26

Conread position: 284-561
Cow position: chrX:33493544-33493836 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 87, 235

Conread position: 284-563
Cow position: chrX:13382093-13382390 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 240

Conread position: 284-574
Cow position: chrX:14900952-14900663 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 144

Conread position: 284-574
Cow position: chrX:24259809-24259511 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 89, 27

Conread position: 284-574
Cow position: chrX:32309875-32310175 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 103, 197

Conread position: 284-583
Cow position: chrX:32623352-32623650 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 9

Conread position: 284-584
Cow position: chrX:47054758-47054445 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 236
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 28, 6

Conread position: 284-587
Cow position: chrX:6278737-6278415 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 236

Conread position: 284-587
Cow position: chrX:6690479-6690177 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 101

Conread position: 284-587
Cow position: chrX:9201316-9201631 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 94, 243

Conread position: 284-587
Cow position: chrX:15814866-15815167 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 84

Conread position: 284-587
Cow position: chrX:21004453-21004767 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 30

Conread position: 284-587
Cow position: chrX:27394245-27393943 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 187

Conread position: 284-587
Cow position: chrX:27680172-27680481 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 28

Conread position: 284-587
Cow position: chrX:30963103-30962794 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 215

Conread position: 284-587
Cow position: chrX:33639740-33640058 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 172

Conread position: 284-587
Cow position: chrX:36975718-36976034 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 192

Conread position: 284-587
Cow position: chrX:38549217-38549530 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 152

Conread position: 284-587
Cow position: chrX:40692969-40692668 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 68

Conread position: 284-587
Cow position: chrX:42492741-42492440 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 14

Conread position: 284-587
Cow position: chrX:45598835-45598522 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 23, 226

Conread position: 285-537
Cow position: chrX:37048811-37048548 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 23, 229

Conread position: 285-545
Cow position: chrX:44870860-44870596 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 82

Conread position: 285-555
Cow position: chrX:35681115-35681393 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 77

Conread position: 285-562
Cow position: chrX:16790067-16789800 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 139

Conread position: 285-581
Cow position: chrX:11455282-11454965 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 31

Conread position: 285-585
Cow position: chrX:7721754-7722069 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 295

Conread position: 285-585
Cow position: chrX:42499259-42498967 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 106

Conread position: 285-587
Cow position: chrX:7161842-7162139 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 100, 53

Conread position: 285-587
Cow position: chrX:12405599-12405298 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 87, 26

Conread position: 285-587
Cow position: chrX:26625907-26625588 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 174

Conread position: 286-560
Cow position: chrX:39938746-39938467 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 92, 17

Conread position: 286-587
Cow position: chrX:7508910-7509222 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 28, 66

Conread position: 286-587
Cow position: chrX:10959631-10959312 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 24, 7

Conread position: 287-481
Cow position: chrX:25411612-25411821 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 167
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 74, 24

Conread position: 288-486
Cow position: chrX:48684450-48684239 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 288-543
Cow position: chrX:23970162-23970418 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 139

Conread position: 288-560
Cow position: chrX:9855073-9855354 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 219
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 19, 188

Conread position: 288-560
Cow position: chrX:9953914-9954195 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 219
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 19, 188

Conread position: 288-583
Cow position: chrX:29032190-29032490 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 85, 23

Conread position: 288-586
Cow position: chrX:619235-618920 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 222

Conread position: 288-586
Cow position: chrX:11856202-11856512 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 40

Conread position: 288-587
Cow position: chrX:16416281-16416592 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 35

Conread position: 288-587
Cow position: chrX:39558575-39558265 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 220

Conread position: 288-587
Cow position: chrX:41884645-41884329 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 24, 222

Conread position: 289-475
Cow position: chrX:4942976-4942782 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 18, 174

Conread position: 289-550
Cow position: chrX:44396789-44397061 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 61, 226

Conread position: 289-587
Cow position: chrX:22074574-22074883 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 185

Conread position: 290-499
Cow position: chrX:31745272-31745063 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 22, 89

Conread position: 290-547
Cow position: chrX:29509669-29509395 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 227

Conread position: 290-572
Cow position: chrX:9041454-9041176 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 97, 135

Conread position: 290-585
Cow position: chrX:21642703-21642401 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 88, 48

Conread position: 290-586
Cow position: chrX:6041420-6041127 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 197
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 135, 79

Conread position: 291-501
Cow position: chrX:17042466-17042693 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 150

Conread position: 291-509
Cow position: chrX:10437889-10437662 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 167

Conread position: 291-587
Cow position: chrX:4044074-4043784 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 157

Conread position: 292-563
Cow position: chrX:1514624-1514353 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 170

Conread position: 292-587
Cow position: chrX:6488363-6488659 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 109

Conread position: 293-496
Cow position: chrX:19019334-19019110 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 19, 0

Conread position: 293-540
Cow position: chrX:1503117-1503375 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 80, 179

Conread position: 293-587
Cow position: chrX:12980053-12979751 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 19, 181

Conread position: 293-587
Cow position: chrX:46073044-46072734 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 294-587
Cow position: chrX:11633457-11633765 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 220

Conread position: 295-587
Cow position: chrX:29602053-29601745 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 28

Conread position: 295-587
Cow position: chrX:36283125-36283423 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 19, 214

Conread position: 296-554
Cow position: chrX:6413827-6414097 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 55

Conread position: 296-563
Cow position: chrX:36355907-36356171 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 81, 15

Conread position: 296-574
Cow position: chrX:20792037-20791745 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 236

Conread position: 298-548
Cow position: chrX:28929625-28929886 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 132

Conread position: 298-585
Cow position: chrX:29120841-29121128 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 14

Conread position: 298-587
Cow position: chrX:37781330-37781026 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 80, 13

Conread position: 299-550
Cow position: chrX:41560455-41560211 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 8, 125

Conread position: 299-562
Cow position: chrX:40567383-40567655 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 172

Conread position: 300-587
Cow position: chrX:39126123-39126409 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 12, 19

Conread position: 301-495
Cow position: chrX:46315593-46315383 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 76, 11

Conread position: 303-587
Cow position: chrX:33000692-33000988 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 209

Conread position: 303-587
Cow position: chrX:40809474-40809776 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 15, 220

Conread position: 304-587
Cow position: chrX:3579735-3580027 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 73, 8

Conread position: 304-587
Cow position: chrX:8869618-8869319 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 55, 15

Conread position: 305-547
Cow position: chrX:28836112-28835859 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 10, 23

Conread position: 306-577
Cow position: chrX:6234657-6234376 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 202

Conread position: 306-587
Cow position: chrX:40035653-40035357 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 194

Conread position: 307-587
Cow position: chrX:32420011-32420295 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 70, 183

Conread position: 308-581
Cow position: chrX:45993006-45993305 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 23, 223

Conread position: 308-587
Cow position: chrX:46587611-46587905 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 208

Conread position: 310-539
Cow position: chrX:17908488-17908253 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 80

Conread position: 313-586
Cow position: chrX:1499468-1499747 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 154

Conread position: 314-587
Cow position: chrX:43780053-43779764 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 64, 210

Conread position: 315-547
Cow position: chrX:4091448-4091683 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 185

Conread position: 315-587
Cow position: chrX:47303079-47302794 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 184

Conread position: 316-587
Cow position: chrX:43973360-43973628 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 85

Conread position: 317-563
Cow position: chrX:36961438-36961700 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 61, 200

Conread position: 319-587
Cow position: chrX:47484467-47484181 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 53, 206

Conread position: 322-542
Cow position: chrX:45874806-45875036 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 177

Conread position: 323-587
Cow position: chrX:43730406-43730141 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 70

Conread position: 324-577
Cow position: chrX:23785463-23785720 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 54, 67

Conread position: 326-587
Cow position: chrX:42235722-42235441 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 328-514
Cow position: chrX:31256681-31256877 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 172

Conread position: 330-587
Cow position: chrX:36067835-36068098 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 48, 180

Conread position: 332-587
Cow position: chrX:32820847-32821111 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 11

Conread position: 333-587
Cow position: chrX:7336645-7336924 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 161

Conread position: 335-561
Cow position: chrX:13785537-13785303 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 62, 37

Conread position: 336-587
Cow position: chrX:31252239-31252491 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 29, 175

Conread position: 336-587
Cow position: chrX:36060973-36061243 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 187

Conread position: 337-587
Cow position: chrX:47186498-47186241 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 133

Conread position: 338-587
Cow position: chrX:47166061-47165803 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 20

Conread position: 339-547
Cow position: chrX:29563546-29563326 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 94

Conread position: 339-585
Cow position: chrX:169701-169465 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 75, 38

Conread position: 339-587
Cow position: chrX:4279290-4279035 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 164

Conread position: 341-585
Cow position: chrX:22465782-22466037 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 37, 92

Conread position: 341-587
Cow position: chrX:22387421-22387167 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 28, 174

Conread position: 341-587
Cow position: chrX:35885903-35885644 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 153

Conread position: 342-547
Cow position: chrX:37750426-37750211 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 49

Conread position: 343-583
Cow position: chrX:4398954-4399205 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 35, 127

Conread position: 343-587
Cow position: chrX:37955666-37955930 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 127

Conread position: 344-585
Cow position: chrX:19003139-19003374 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 57

Conread position: 346-540
Cow position: chrX:14003813-14003610 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 31, 159

Conread position: 347-587
Cow position: chrX:41068560-41068808 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 350-559
Cow position: chrX:41992206-41991990 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 20

Conread position: 352-587
Cow position: chrX:45875239-45875475 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 48

Conread position: 357-587
Cow position: chrX:27227966-27228209 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 191
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 17, 160

Conread position: 360-587
Cow position: chrX:6260300-6260066 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 24

Conread position: 365-587
Cow position: chrX:29680404-29680178 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 181
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 32, 5

Conread position: 371-587
Cow position: chrX:616401-616176 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 130

Conread position: 374-587
Cow position: chrX:41027021-41027242 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 21, 143

Conread position: 376-587
Cow position: chrX:9651155-9650941 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 23, 15

Conread position: 377-540
Cow position: chrX:35969212-35969050 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 6

Conread position: 377-585
Cow position: chrX:4512108-4512326 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 13

Conread position: 377-585
Cow position: chrX:29723608-29723821 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 124

Conread position: 377-587
Cow position: chrX:34315397-34315604 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 79

Conread position: 384-586
Cow position: chrX:27946178-27945972 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 15

Conread position: 384-587
Cow position: chrX:11085176-11084980 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 11

Conread position: 384-587
Cow position: chrX:40320286-40320489 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 15

Conread position: 385-554
Cow position: chrX:42789505-42789670 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 386-506
Cow position: chrX:32747562-32747689 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 387-560
Cow position: chrX:12018172-12018348 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 12, 105

Conread position: 392-558
Cow position: chrX:29488114-29487954 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 68

Conread position: 393-587
Cow position: chrX:9252271-9252080 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 22

Conread position: 399-547
Cow position: chrX:8326655-8326802 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 86, 23

Conread position: 399-547
Cow position: chrX:35848456-35848607 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 15, 53

Conread position: 399-570
Cow position: chrX:38654535-38654364 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 39

Conread position: 399-574
Cow position: chrX:20790816-20790983 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 89

Conread position: 399-577
Cow position: chrX:23940130-23939966 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 399-583
Cow position: chrX:42927924-42927745 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 23, 94

Conread position: 399-585
Cow position: chrX:20584219-20584409 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 399-585
Cow position: chrX:27685142-27685329 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 103

Conread position: 399-587
Cow position: chrX:9365780-9365593 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 24, 84

Conread position: 399-587
Cow position: chrX:19273827-19273624 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 399-587
Cow position: chrX:24331673-24331859 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 100

Conread position: 399-587
Cow position: chrX:38728632-38728817 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 104

Conread position: 400-587
Cow position: chrX:48044618-48044432 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 112

Conread position: 401-587
Cow position: chrX:27119596-27119780 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 55

Conread position: 401-587
Cow position: chrX:29194131-29194312 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 52

Conread position: 405-587
Cow position: chrX:10516157-10516336 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 36

Conread position: 407-558
Cow position: chrX:48201199-48201348 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 97

Conread position: 408-586
Cow position: chrX:12095870-12095690 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 88

Conread position: 408-587
Cow position: chrX:21327812-21327996 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 412-587
Cow position: chrX:27261099-27261275 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 30, 37

Conread position: 412-587
Cow position: chrX:33205054-33204886 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 8, 67

Conread position: 413-532
Cow position: chrX:25283102-25282987 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 413-587
Cow position: chrX:5900381-5900545 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 413-587
Cow position: chrX:16348657-16348488 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 6, 144

Conread position: 413-587
Cow position: chrX:20168469-20168641 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 7, 87

Conread position: 413-587
Cow position: chrX:31515080-31515257 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 7, 52

Conread position: 413-587
Cow position: chrX:42873306-42873465 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 413-587
Cow position: chrX:46433403-46433574 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 84

Conread position: 414-587
Cow position: chrX:20882025-20881861 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 50

Conread position: 418-561
Cow position: chrX:29549630-29549488 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 82, 0

Conread position: 418-587
Cow position: chrX:1572220-1572056 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 421-587
Cow position: chrX:39220000-39220162 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 70, 36

Conread position: 421-587
Cow position: chrX:42855375-42855541 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 82, 42

Conread position: 422-585
Cow position: chrX:41271077-41270905 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 155

Conread position: 423-587
Cow position: chrX:4515606-4515774 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 133, 75

Conread position: 424-583
Cow position: chrX:13136309-13136153 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 429-587
Cow position: chrX:4153107-4152948 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 429-587
Cow position: chrX:19965474-19965313 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 76

Conread position: 430-587
Cow position: chrX:22915107-22914957 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 433-561
Cow position: chrX:17301377-17301249 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 86, 71

Conread position: 435-587
Cow position: chrX:15820531-15820677 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 436-574
Cow position: chrX:44703137-44703004 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 439-586
Cow position: chrX:25036925-25037069 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 439-587
Cow position: chrX:23561799-23561941 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 140, 59

Conread position: 443-587
Cow position: chrX:1360028-1360172 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 100, 43

Conread position: 443-587
Cow position: chrX:13146923-13147064 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 444-587
Cow position: chrX:31627038-31626895 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 41, 124

Conread position: 452-583
Cow position: chrX:19943286-19943155 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 463-587
Cow position: chrX:42893879-42894009 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 465-587
Cow position: chrX:4645948-4645830 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 480-587
Cow position: chrX:25411886-25411990 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Show alignments to all cow chromosomes.