Cow genome map


           Conread name:
           Blo2-AR038F03PBC30AF03S
        

               Conread position:
               1-178
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 97
               

               Conread position:
               1-182
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               97, 21
               

               Conread position:
               1-182
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               97, 55
               

               Conread position:
               1-183
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 21
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               148, 52
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               81, 45
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               97, 51
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               20, 30
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               20, 58
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               85, 51
               

               Conread position:
               1-247
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 19
               

               Conread position:
               1-250
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               15, 30
               

               Conread position:
               1-250
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 8
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 52
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 52
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               197
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               45, 93
               

               Conread position:
               1-258
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               82, 11
               

               Conread position:
               1-268
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               97, 18
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               12, 53
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               1-272
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 19
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 8
               

               Conread position:
               2-162
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               84, 49
               

               Conread position:
               2-258
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               2-271
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               3-240
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               95, 50
               

               Conread position:
               3-246
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 16
               

               Conread position:
               3-258
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 51
               

               Conread position:
               4-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               94, 52
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               94, 16
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               11, 53
               

               Conread position:
               4-268
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               4-278
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 51
               

               Conread position:
               4-278
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               99, 49
               

               Conread position:
               4-281
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 8
               

               Conread position:
               5-194
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               5-241
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               96, 15
               

               Conread position:
               5-256
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               143, 24
               

               Conread position:
               5-272
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 49
               

               Conread position:
               6-226
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               10, 28
               

               Conread position:
               6-233
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               6-266
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 47
               

               Conread position:
               6-271
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               9-244
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               69, 47
               

               Conread position:
               9-271
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               84, 17
               

               Conread position:
               10-222
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               68, 23
               

               Conread position:
               10-256
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 43
               

               Conread position:
               11-246
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               19, 47
               

               Conread position:
               11-271
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               95, 15
               

               Conread position:
               11-272
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               87, 22
               

               Conread position:
               12-183
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               12-254
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               158, 44
               

               Conread position:
               12-278
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 23
               

               Conread position:
               13-256
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               212, 40
               

               Conread position:
               14-254
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 13
               

               Conread position:
               15-271
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 31
               

               Conread position:
               20-211
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 34
               

               Conread position:
               20-252
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               223, 114
               

               Conread position:
               20-256
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 34
               

               Conread position:
               21-171
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               86, 32
               

               Conread position:
               21-188
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 34
               

               Conread position:
               21-271
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               54, 134
               

               Conread position:
               21-271
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               22-190
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               22-239
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               76, 11
               

               Conread position:
               22-254
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               127, 11
               

               Conread position:
               22-254
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               22-271
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 11
               

               Conread position:
               22-281
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               66, 31
               

               Conread position:
               23-237
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               77, 60
               

               Conread position:
               23-271
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               125, 9
               

               Conread position:
               23-284
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               70, 30
               

               Conread position:
               26-239
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 27
               

               Conread position:
               26-278
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 27
               

               Conread position:
               27-245
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               51, 26
               

               Conread position:
               28-250
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               70, 25
               

               Conread position:
               28-256
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               70, 24
               

               Conread position:
               28-271
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               29-228
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               65, 17
               

               Conread position:
               33-155
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 20
               

               Conread position:
               33-196
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               53, 20
               

               Conread position:
               33-202
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               61, 19
               

               Conread position:
               33-245
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               33-254
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               60, 20
               

               Conread position:
               33-256
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               33-267
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 20
               

               Conread position:
               33-271
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               44, 74
               

               Conread position:
               34-271
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 19
               

               Conread position:
               34-281
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               122, 19
               

               Conread position:
               37-249
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               113, 19
               

               Conread position:
               40-245
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               102, 131
               

               Conread position:
               41-268
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               53, 15
               

               Conread position:
               48-256
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               52-189
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 43
               

               Conread position:
               53-265
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               45, 28
               

               Conread position:
               55-268
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 28
               

               Conread position:
               56-256
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               152, 0
               
Show alignments to all cow chromosomes.