Cow genome map

Conread name: Blo2-AR038F03PBC30AF03S

Conread position: 1-154
Cow position:
Alignm length: 157
Alignm identity: 126
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 15, 54

Conread position: 1-154
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 11, 26

Conread position: 1-177
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 15, 41

Conread position: 1-190
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 148, 52

Conread position: 1-199
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 20, 41

Conread position: 1-229
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 67, 51

Conread position: 1-234
Cow position:
Alignm length: 239
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 11

Conread position: 1-237
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 0

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 184
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 27, 53

Conread position: 1-243
Cow position:
Alignm length: 245
Alignm identity: 179
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 20, 56

Conread position: 1-244
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 133, 44

Conread position: 1-244
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 20, 8

Conread position: 1-246
Cow position:
Alignm length: 261
Alignm identity: 186
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 62, 11

Conread position: 1-251
Cow position:
Alignm length: 256
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 17

Conread position: 1-252
Cow position:
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 8

Conread position: 1-252
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 20, 51

Conread position: 1-254
Cow position:
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 56

Conread position: 1-255
Cow position:
Alignm length: 262
Alignm identity: 192
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 12, 47

Conread position: 1-256
Cow position:
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 53

Conread position: 1-256
Cow position:
Alignm length: 261
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 22, 8

Conread position: 1-256
Cow position:
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 53

Conread position: 1-256
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 98, 41

Conread position: 1-256
Cow position:
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 52

Conread position: 1-266
Cow position:
Alignm length: 269
Alignm identity: 201
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 97, 17

Conread position: 1-271
Cow position:
Alignm length: 272
Alignm identity: 193
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 97, 54

Conread position: 1-271
Cow position:
Alignm length: 289
Alignm identity: 214
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 41, 114

Conread position: 1-271
Cow position:
Alignm length: 272
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 1-281
Cow position:
Alignm length: 288
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 53

Conread position: 1-281
Cow position:
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 56

Conread position: 1-284
Cow position:
Alignm length: 285
Alignm identity: 209
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 19, 46

Conread position: 2-208
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 96, 18

Conread position: 2-224
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 31

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 51

Conread position: 3-240
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 3-252
Cow position:
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 16

Conread position: 3-271
Cow position:
Alignm length: 270
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 216, 17

Conread position: 4-223
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 11, 23

Conread position: 4-246
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 17, 50

Conread position: 4-250
Cow position:
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 23

Conread position: 4-252
Cow position:
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 15

Conread position: 4-265
Cow position:
Alignm length: 262
Alignm identity: 191
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 22, 0

Conread position: 4-271
Cow position:
Alignm length: 273
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 51

Conread position: 4-271
Cow position:
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 19

Conread position: 5-256
Cow position:
Alignm length: 274
Alignm identity: 206
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 77, 48

Conread position: 6-171
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 92, 47

Conread position: 6-227
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 6-255
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 48

Conread position: 6-273
Cow position:
Alignm length: 275
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 48

Conread position: 6-278
Cow position:
Alignm length: 283
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 21

Conread position: 7-234
Cow position:
Alignm length: 228
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 7-284
Cow position:
Alignm length: 280
Alignm identity: 198
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 9, 47

Conread position: 8-187
Cow position:
Alignm length: 184
Alignm identity: 147
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 17, 46

Conread position: 8-267
Cow position:
Alignm length: 261
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 45

Conread position: 8-271
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 45

Conread position: 8-273
Cow position:
Alignm length: 267
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 12

Conread position: 10-256
Cow position:
Alignm length: 248
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 23

Conread position: 11-220
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 58, 42

Conread position: 11-246
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 41

Conread position: 12-250
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 66, 41

Conread position: 12-256
Cow position:
Alignm length: 256
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 12-271
Cow position:
Alignm length: 262
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 132

Conread position: 12-278
Cow position:
Alignm length: 274
Alignm identity: 200
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 84, 34

Conread position: 14-199
Cow position:
Alignm length: 191
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 69, 12

Conread position: 14-238
Cow position:
Alignm length: 232
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 12

Conread position: 14-254
Cow position:
Alignm length: 242
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 84, 19

Conread position: 15-250
Cow position:
Alignm length: 241
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 38

Conread position: 20-220
Cow position:
Alignm length: 202
Alignm identity: 160
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 78, 36

Conread position: 20-271
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 33

Conread position: 21-225
Cow position:
Alignm length: 207
Alignm identity: 161
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 65, 12

Conread position: 21-264
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 73, 20

Conread position: 21-271
Cow position:
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 32

Conread position: 21-271
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 73, 12

Conread position: 21-276
Cow position:
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 35

Conread position: 21-280
Cow position:
Alignm length: 263
Alignm identity: 189
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 51, 32

Conread position: 21-281
Cow position:
Alignm length: 278
Alignm identity: 206
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 86, 32

Conread position: 22-235
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 33

Conread position: 22-244
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 22-251
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 76, 31

Conread position: 22-251
Cow position:
Alignm length: 230
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 22-254
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 5, 32

Conread position: 22-271
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 76, 33

Conread position: 23-267
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 75, 33

Conread position: 23-271
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 32

Conread position: 23-271
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 125, 10

Conread position: 23-281
Cow position:
Alignm length: 260
Alignm identity: 190
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 202, 30

Conread position: 28-258
Cow position:
Alignm length: 235
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 25

Conread position: 29-182
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 57, 24

Conread position: 29-202
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 33-227
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 65, 8

Conread position: 33-245
Cow position:
Alignm length: 214
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 22

Conread position: 33-264
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 65, 22

Conread position: 35-271
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 35-280
Cow position:
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 36-261
Cow position:
Alignm length: 233
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 17

Conread position: 37-234
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 16

Conread position: 53-252
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 89, 126

Conread position: 55-212
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 43, 26

Conread position: 56-254
Cow position:
Alignm length: 204
Alignm identity: 165
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 34

Conread position: 56-268
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 26, 37

Conread position: 57-284
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 24

Conread position: 60-271
Cow position:
Alignm length: 216
Alignm identity: 166
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 38, 21

Conread position: 61-223
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 20

Conread position: 63-264
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 18

Conread position: 67-271
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 26, 16

Show alignments to all cow chromosomes.