Cow genome map
| Conread name: | Blo2-AR038F03PBC30AF03S |
| Conread position: | 1-171 |
| Cow position: | chr14:14580927-14581092 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 11 |
| Conread position: | 1-184 |
| Cow position: | chr14:22952935-22952758 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 1-196 |
| Cow position: | chr14:29029886-29030080 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 59, 52 |
| Conread position: | 1-202 |
| Cow position: | chr14:24387505-24387709 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 141, 54 |
| Conread position: | 1-203 |
| Cow position: | chr14:28115129-28114924 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 1-211 |
| Cow position: | chr14:19372401-19372610 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 92, 19 |
| Conread position: | 1-238 |
| Cow position: | chr14:8101848-8102072 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-239 |
| Cow position: | chr14:39422535-39422293 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 74, 53 |
| Conread position: | 1-246 |
| Cow position: | chr14:5630220-5630465 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 19 |
| Conread position: | 1-246 |
| Cow position: | chr14:7695325-7695551 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 85, 8 |
| Conread position: | 1-250 |
| Cow position: | chr14:19863375-19863135 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 8 |
| Conread position: | 1-254 |
| Cow position: | chr14:27312481-27312734 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 56 |
| Conread position: | 1-254 |
| Cow position: | chr14:48412824-48412565 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 1-266 |
| Cow position: | chr14:25779155-25779416 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 7 |
| Conread position: | 1-267 |
| Cow position: | chr14:6735805-6735543 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 48 |
| Conread position: | 1-271 |
| Cow position: | chr14:22381495-22381228 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-271 |
| Cow position: | chr14:35381648-35381915 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 26 |
| Conread position: | 1-271 |
| Cow position: | chr14:37883858-37883590 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 1-281 |
| Cow position: | chr14:28378417-28378700 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 52 |
| Conread position: | 2-256 |
| Cow position: | chr14:38379081-38379332 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 93, 10 |
| Conread position: | 3-194 |
| Cow position: | chr14:27919678-27919488 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 3-237 |
| Cow position: | chr14:9539135-9538902 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 43 |
| Conread position: | 4-267 |
| Cow position: | chr14:45605151-45605412 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 51 |
| Conread position: | 4-271 |
| Cow position: | chr14:42154906-42154634 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 11, 51 |
| Conread position: | 6-185 |
| Cow position: | chr14:20110659-20110479 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 6-193 |
| Cow position: | chr14:12667790-12667981 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 6-240 |
| Cow position: | chr14:36151468-36151688 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 6-259 |
| Cow position: | chr14:20010248-20009998 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 6-271 |
| Cow position: | chr14:48427138-48427403 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 14 |
| Conread position: | 6-279 |
| Cow position: | chr14:28795735-28796009 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 48 |
| Conread position: | 7-252 |
| Cow position: | chr14:19594067-19593832 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 47 |
| Conread position: | 7-280 |
| Cow position: | chr14:31734789-31734518 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 55, 46 |
| Conread position: | 10-193 |
| Cow position: | chr14:39037300-39037478 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 90, 43 |
| Conread position: | 10-268 |
| Cow position: | chr14:41756323-41756582 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 11-250 |
| Cow position: | chr14:38144042-38143808 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 12-279 |
| Cow position: | chr14:38921019-38921272 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 86, 25 |
| Conread position: | 13-193 |
| Cow position: | chr14:16033077-16033256 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 13-264 |
| Cow position: | chr14:43046217-43046464 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 13-271 |
| Cow position: | chr14:3878525-3878779 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 81, 30 |
| Conread position: | 14-246 |
| Cow position: | chr14:7482124-7482357 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 27, 40 |
| Conread position: | 14-252 |
| Cow position: | chr14:33828230-33828457 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 82, 39 |
| Conread position: | 14-342 |
| Cow position: | chr14:19129579-19129902 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 38 |
| Conread position: | 20-188 |
| Cow position: | chr14:33643707-33643547 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 20-248 |
| Cow position: | chr14:21357636-21357856 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 66, 26 |
| Conread position: | 21-202 |
| Cow position: | chr14:1646114-1645931 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 127, 5 |
| Conread position: | 21-245 |
| Cow position: | chr14:8541138-8540915 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 53, 32 |
| Conread position: | 21-281 |
| Cow position: | chr14:106500-106237 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 22-232 |
| Cow position: | chr14:19975306-19975505 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 32 |
| Conread position: | 22-245 |
| Cow position: | chr14:38338067-38337850 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 136, 31 |
| Conread position: | 23-256 |
| Cow position: | chr14:41210934-41211169 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 75, 31 |
| Conread position: | 24-252 |
| Cow position: | chr14:39770153-39769923 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 74, 33 |
| Conread position: | 24-278 |
| Cow position: | chr14:46735384-46735653 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 61, 29 |
| Conread position: | 25-299 |
| Cow position: | chr14:11820042-11819771 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 26-219 |
| Cow position: | chr14:8750157-8750349 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 68, 27 |
| Conread position: | 26-285 |
| Cow position: | chr14:34199767-34199501 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 30 |
| Conread position: | 29-207 |
| Cow position: | chr14:40433005-40433184 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 32-178 |
| Cow position: | chr14:26490655-26490510 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 71, 25 |
| Conread position: | 33-209 |
| Cow position: | chr14:50504263-50504084 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 33-256 |
| Cow position: | chr14:6490621-6490392 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 77 |
| Conread position: | 33-272 |
| Cow position: | chr14:11810482-11810244 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 39-284 |
| Cow position: | chr14:27848295-27848539 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 17 |
| Conread position: | 40-292 |
| Cow position: | chr14:24581021-24581271 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 13 |
| Conread position: | 42-271 |
| Cow position: | chr14:11641472-11641249 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 52-284 |
| Cow position: | chr14:21201732-21201490 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 53-271 |
| Cow position: | chr14:37108800-37108584 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 42 |
| Conread position: | 60-271 |
| Cow position: | chr14:27791642-27791857 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 68-269 |
| Cow position: | chr14:15054866-15054663 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 30, 15 |
Show alignments to all cow chromosomes.