Cow genome map

Conread name: Blo2-AR038F03PBC30AF03S

Conread position: 1-154
Cow position: chr15:10608202-10608049 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 97, 52

Conread position: 1-186
Cow position: chr15:2968441-2968621 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 74, 45

Conread position: 1-223
Cow position: chr15:50322699-50322920 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 97, 52

Conread position: 1-239
Cow position: chr15:39621443-39621679 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 53

Conread position: 1-250
Cow position: chr15:22939220-22938980 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 21, 40

Conread position: 1-252
Cow position: chr15:41620086-41619832 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 8

Conread position: 1-253
Cow position: chr15:1083271-1083025 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 147, 8

Conread position: 1-256
Cow position: chr15:6970092-6970342 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 136, 52

Conread position: 1-258
Cow position: chr15:1329998-1329741 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 8

Conread position: 1-267
Cow position: chr15:7750032-7749777 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 55

Conread position: 1-269
Cow position: chr15:36621514-36621789 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 135

Conread position: 1-284
Cow position: chr15:21421042-21421327 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 51

Conread position: 1-298
Cow position: chr15:19771237-19771529 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 77, 26

Conread position: 2-244
Cow position: chr15:21803555-21803311 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 104, 8

Conread position: 2-259
Cow position: chr15:12170349-12170600 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 56

Conread position: 2-271
Cow position: chr15:20459199-20458927 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 7

Conread position: 4-198
Cow position: chr15:11646382-11646189 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 19, 53

Conread position: 4-259
Cow position: chr15:40009544-40009289 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 49

Conread position: 4-267
Cow position: chr15:13387186-13387450 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 94, 52

Conread position: 4-271
Cow position: chr15:16603929-16604192 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 69, 49

Conread position: 5-240
Cow position: chr15:8665487-8665240 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 11, 0

Conread position: 5-250
Cow position: chr15:21893891-21894134 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 15

Conread position: 6-250
Cow position: chr15:24044989-24044746 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 21, 49

Conread position: 6-281
Cow position: chr15:5498924-5498644 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 29

Conread position: 8-253
Cow position: chr15:53680653-53680413 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 8-272
Cow position: chr15:45245432-45245176 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 83

Conread position: 8-281
Cow position: chr15:13515480-13515754 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 140, 25

Conread position: 14-279
Cow position: chr15:363147-363399 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 12, 0

Conread position: 14-281
Cow position: chr15:20351947-20352224 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 39

Conread position: 15-281
Cow position: chr15:9871296-9871030 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 41

Conread position: 20-256
Cow position: chr15:45216943-45217182 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 114, 33

Conread position: 20-271
Cow position: chr15:4676884-4676633 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 10

Conread position: 21-253
Cow position: chr15:39599565-39599795 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 32

Conread position: 21-271
Cow position: chr15:10335881-10336124 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 12, 0

Conread position: 21-271
Cow position: chr15:13554477-13554713 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 79, 33

Conread position: 21-274
Cow position: chr15:11363054-11362802 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 32

Conread position: 22-264
Cow position: chr15:22532362-22532607 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 31

Conread position: 23-193
Cow position: chr15:23696784-23696622 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 75, 10

Conread position: 23-225
Cow position: chr15:12304767-12304968 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 70, 30

Conread position: 25-252
Cow position: chr15:19403108-19403331 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 28

Conread position: 28-268
Cow position: chr15:21908066-21908305 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 66, 25

Conread position: 28-293
Cow position: chr15:16307544-16307811 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 17

Conread position: 29-237
Cow position: chr15:6628155-6627953 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 24

Conread position: 32-281
Cow position: chr15:6082509-6082258 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 35

Conread position: 36-220
Cow position: chr15:39598381-39598560 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 48-247
Cow position: chr15:26158467-26158270 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 50, 42

Conread position: 48-271
Cow position: chr15:30982074-30982287 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 42

Conread position: 49-267
Cow position: chr15:16583553-16583343 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 172
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 49, 14

Conread position: 49-271
Cow position: chr15:33976538-33976320 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 41

Conread position: 55-240
Cow position: chr15:6586560-6586371 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 56-226
Cow position: chr15:52462872-52463046 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 44, 62

Conread position: 56-256
Cow position: chr15:19192789-19192586 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 31

Conread position: 62-284
Cow position: chr15:28038920-28039137 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 67-282
Cow position: chr15:24822210-24821998 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 14

Show alignments to all cow chromosomes.