Cow genome map
Conread name: | Blo2-AR038F03PBC30AF03S |
Conread position: | 1-154 |
Cow position: | chr15:10608202-10608049 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 114 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 97, 52 |
Conread position: | 1-186 |
Cow position: | chr15:2968441-2968621 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 143 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 74, 45 |
Conread position: | 1-223 |
Cow position: | chr15:50322699-50322920 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 169 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 97, 52 |
Conread position: | 1-239 |
Cow position: | chr15:39621443-39621679 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 53 |
Conread position: | 1-250 |
Cow position: | chr15:22939220-22938980 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 186 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 21, 40 |
Conread position: | 1-252 |
Cow position: | chr15:41620086-41619832 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 8 |
Conread position: | 1-253 |
Cow position: | chr15:1083271-1083025 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 175 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 147, 8 |
Conread position: | 1-256 |
Cow position: | chr15:6970092-6970342 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 193 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 136, 52 |
Conread position: | 1-258 |
Cow position: | chr15:1329998-1329741 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 8 |
Conread position: | 1-267 |
Cow position: | chr15:7750032-7749777 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 186 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 15, 55 |
Conread position: | 1-269 |
Cow position: | chr15:36621514-36621789 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 135 |
Conread position: | 1-284 |
Cow position: | chr15:21421042-21421327 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 51 |
Conread position: | 1-298 |
Cow position: | chr15:19771237-19771529 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 215 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 77, 26 |
Conread position: | 2-244 |
Cow position: | chr15:21803555-21803311 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 186 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 104, 8 |
Conread position: | 2-259 |
Cow position: | chr15:12170349-12170600 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 188 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 26, 56 |
Conread position: | 2-271 |
Cow position: | chr15:20459199-20458927 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 7 |
Conread position: | 4-198 |
Cow position: | chr15:11646382-11646189 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 148 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 19, 53 |
Conread position: | 4-259 |
Cow position: | chr15:40009544-40009289 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 49 |
Conread position: | 4-267 |
Cow position: | chr15:13387186-13387450 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 196 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 94, 52 |
Conread position: | 4-271 |
Cow position: | chr15:16603929-16604192 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 191 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 69, 49 |
Conread position: | 5-240 |
Cow position: | chr15:8665487-8665240 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 182 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 5-250 |
Cow position: | chr15:21893891-21894134 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 15 |
Conread position: | 6-250 |
Cow position: | chr15:24044989-24044746 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 180 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 21, 49 |
Conread position: | 6-281 |
Cow position: | chr15:5498924-5498644 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 29 |
Conread position: | 8-253 |
Cow position: | chr15:53680653-53680413 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 8-272 |
Cow position: | chr15:45245432-45245176 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 83 |
Conread position: | 8-281 |
Cow position: | chr15:13515480-13515754 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 197 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 140, 25 |
Conread position: | 14-279 |
Cow position: | chr15:363147-363399 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 190 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 14-281 |
Cow position: | chr15:20351947-20352224 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 39 |
Conread position: | 15-281 |
Cow position: | chr15:9871296-9871030 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 41 |
Conread position: | 20-256 |
Cow position: | chr15:45216943-45217182 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 171 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 114, 33 |
Conread position: | 20-271 |
Cow position: | chr15:4676884-4676633 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 10 |
Conread position: | 21-253 |
Cow position: | chr15:39599565-39599795 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 32 |
Conread position: | 21-271 |
Cow position: | chr15:10335881-10336124 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 183 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 21-271 |
Cow position: | chr15:13554477-13554713 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 193 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 79, 33 |
Conread position: | 21-274 |
Cow position: | chr15:11363054-11362802 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 32 |
Conread position: | 22-264 |
Cow position: | chr15:22532362-22532607 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 31 |
Conread position: | 23-193 |
Cow position: | chr15:23696784-23696622 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 127 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 75, 10 |
Conread position: | 23-225 |
Cow position: | chr15:12304767-12304968 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 157 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 70, 30 |
Conread position: | 25-252 |
Cow position: | chr15:19403108-19403331 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 28 |
Conread position: | 28-268 |
Cow position: | chr15:21908066-21908305 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 177 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 66, 25 |
Conread position: | 28-293 |
Cow position: | chr15:16307544-16307811 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 17 |
Conread position: | 29-237 |
Cow position: | chr15:6628155-6627953 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 149 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 102, 24 |
Conread position: | 32-281 |
Cow position: | chr15:6082509-6082258 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 35 |
Conread position: | 36-220 |
Cow position: | chr15:39598381-39598560 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 138 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 48-247 |
Cow position: | chr15:26158467-26158270 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 154 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 50, 42 |
Conread position: | 48-271 |
Cow position: | chr15:30982074-30982287 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 162 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 50, 42 |
Conread position: | 49-267 |
Cow position: | chr15:16583553-16583343 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 172 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 49, 14 |
Conread position: | 49-271 |
Cow position: | chr15:33976538-33976320 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 41 |
Conread position: | 55-240 |
Cow position: | chr15:6586560-6586371 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 137 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 56-226 |
Cow position: | chr15:52462872-52463046 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 125 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 44, 62 |
Conread position: | 56-256 |
Cow position: | chr15:19192789-19192586 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 142 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 24, 31 |
Conread position: | 62-284 |
Cow position: | chr15:28038920-28039137 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 0 |
Conread position: | 67-282 |
Cow position: | chr15:24822210-24821998 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 159 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 31, 14 |
Show alignments to all cow chromosomes.