Cow genome map


           Conread name:
           Blo2-AR038F03PBC30AF03S
        

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               15, 54
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               147, 8
               

               Conread position:
               1-229
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 11
               

               Conread position:
               1-250
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               180, 50
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               15, 8
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               61, 18
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 52
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 18
               

               Conread position:
               1-279
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               1-281
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 54
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               2-256
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               3-155
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               83, 50
               

               Conread position:
               3-245
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               147, 23
               

               Conread position:
               3-254
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               62, 38
               

               Conread position:
               3-267
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 50
               

               Conread position:
               4-235
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               174, 42
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               73, 49
               

               Conread position:
               4-266
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               4-266
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               142, 51
               

               Conread position:
               4-271
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               89, 52
               

               Conread position:
               5-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               77, 50
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               81, 48
               

               Conread position:
               5-269
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               93, 18
               

               Conread position:
               5-271
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               10, 49
               

               Conread position:
               5-288
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 48
               

               Conread position:
               6-213
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               23, 41
               

               Conread position:
               6-236
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               92, 16
               

               Conread position:
               6-246
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               6-271
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 48
               

               Conread position:
               8-266
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               155, 38
               

               Conread position:
               10-250
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               90, 43
               

               Conread position:
               11-223
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               87, 45
               

               Conread position:
               12-188
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               66, 14
               

               Conread position:
               12-251
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               12-272
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 44
               

               Conread position:
               13-293
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               85, 41
               

               Conread position:
               14-209
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               77, 42
               

               Conread position:
               15-281
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               235, 38
               

               Conread position:
               20-245
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               78, 70
               

               Conread position:
               21-185
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 21
               

               Conread position:
               21-240
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               21-254
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               77, 12
               

               Conread position:
               22-252
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               53, 34
               

               Conread position:
               22-254
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               128, 34
               

               Conread position:
               22-268
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 31
               

               Conread position:
               22-280
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               124, 33
               

               Conread position:
               23-212
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               26-229
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 29
               

               Conread position:
               28-243
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               195, 26
               

               Conread position:
               28-246
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               70, 27
               

               Conread position:
               28-271
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               122, 25
               

               Conread position:
               29-196
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               69, 24
               

               Conread position:
               29-271
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               51, 29
               

               Conread position:
               33-224
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               60, 26
               

               Conread position:
               33-229
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               36-254
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               36-281
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               42-245
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               56, 11
               

               Conread position:
               47-249
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               51, 37
               

               Conread position:
               56-253
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               42, 25
               

               Conread position:
               56-254
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               183, 97
               

               Conread position:
               56-254
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               42, 25
               

               Conread position:
               56-283
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               45, 9
               

               Conread position:
               58-244
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               60-256
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 102
               

               Conread position:
               60-281
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               38, 30
               
Show alignments to all cow chromosomes.