Cow genome map
| Conread name: | Blo2-AR038F03PBC30AF03S |
| Conread position: | 1-158 |
| Cow position: | chr22:32698745-32698586 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 77, 40 |
| Conread position: | 1-163 |
| Cow position: | chr22:12389080-12388913 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 56 |
| Conread position: | 1-167 |
| Cow position: | chr22:16823084-16822921 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-171 |
| Cow position: | chr22:26123347-26123513 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 99, 52 |
| Conread position: | 1-188 |
| Cow position: | chr22:1081487-1081299 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 8 |
| Conread position: | 1-232 |
| Cow position: | chr22:2627557-2627328 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 77, 52 |
| Conread position: | 1-233 |
| Cow position: | chr22:42684890-42684650 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 51 |
| Conread position: | 1-244 |
| Cow position: | chr22:3325566-3325321 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 46 |
| Conread position: | 1-254 |
| Cow position: | chr22:32895201-32894933 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 14, 54 |
| Conread position: | 1-254 |
| Cow position: | chr22:34712707-34712444 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 1-254 |
| Cow position: | chr22:41245229-41244976 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 15, 57 |
| Conread position: | 1-271 |
| Cow position: | chr22:877496-877236 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 77, 45 |
| Conread position: | 1-271 |
| Cow position: | chr22:14882135-14882398 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 85, 19 |
| Conread position: | 1-271 |
| Cow position: | chr22:16621157-16620892 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 7 |
| Conread position: | 1-271 |
| Cow position: | chr22:27577724-27577446 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 98, 45 |
| Conread position: | 1-271 |
| Cow position: | chr22:30515236-30514968 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 56 |
| Conread position: | 1-274 |
| Cow position: | chr22:24734330-24734601 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 97, 54 |
| Conread position: | 1-305 |
| Cow position: | chr22:36539681-36539983 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 20, 56 |
| Conread position: | 3-246 |
| Cow position: | chr22:45685043-45685294 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 4-211 |
| Cow position: | chr22:27825818-27825609 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 11, 27 |
| Conread position: | 4-256 |
| Cow position: | chr22:19047839-19048075 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 49 |
| Conread position: | 4-272 |
| Cow position: | chr22:20626817-20626554 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 16 |
| Conread position: | 5-271 |
| Cow position: | chr22:30710376-30710118 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 7, 49 |
| Conread position: | 5-278 |
| Cow position: | chr22:13861561-13861293 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 88, 21 |
| Conread position: | 6-264 |
| Cow position: | chr22:30483893-30483632 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 88, 20 |
| Conread position: | 6-271 |
| Cow position: | chr22:590315-590061 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 6-274 |
| Cow position: | chr22:8446915-8446642 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 142, 13 |
| Conread position: | 6-281 |
| Cow position: | chr22:31646468-31646198 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 8-283 |
| Cow position: | chr22:12681829-12682091 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 9-166 |
| Cow position: | chr22:10981359-10981205 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 12, 93 |
| Conread position: | 9-244 |
| Cow position: | chr22:31592884-31593121 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 44 |
| Conread position: | 9-250 |
| Cow position: | chr22:4075914-4076164 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 48 |
| Conread position: | 11-271 |
| Cow position: | chr22:30689605-30689344 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 43 |
| Conread position: | 12-246 |
| Cow position: | chr22:10421001-10420758 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 86, 41 |
| Conread position: | 12-271 |
| Cow position: | chr22:3960312-3960583 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 41 |
| Conread position: | 13-271 |
| Cow position: | chr22:16251595-16251852 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 198 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 13-271 |
| Cow position: | chr22:26316441-26316192 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 13-271 |
| Cow position: | chr22:38977811-38977561 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 85, 35 |
| Conread position: | 13-272 |
| Cow position: | chr22:23806576-23806835 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 94, 25 |
| Conread position: | 14-223 |
| Cow position: | chr22:32952448-32952239 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 40, 78 |
| Conread position: | 14-252 |
| Cow position: | chr22:1975581-1975344 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 14-254 |
| Cow position: | chr22:9127374-9127136 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 135, 19 |
| Conread position: | 15-227 |
| Cow position: | chr22:28357008-28356792 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 19-271 |
| Cow position: | chr22:5467403-5467655 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 20-246 |
| Cow position: | chr22:28731637-28731424 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 75, 6 |
| Conread position: | 20-259 |
| Cow position: | chr22:14601467-14601238 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 233, 33 |
| Conread position: | 21-252 |
| Cow position: | chr22:6122940-6123163 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 82, 35 |
| Conread position: | 22-255 |
| Cow position: | chr22:4651142-4650910 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 22-271 |
| Cow position: | chr22:8412489-8412237 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 76, 31 |
| Conread position: | 22-271 |
| Cow position: | chr22:17993072-17993317 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 23-254 |
| Cow position: | chr22:34750636-34750407 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 75, 31 |
| Conread position: | 23-265 |
| Cow position: | chr22:10161921-10161684 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 23-268 |
| Cow position: | chr22:15039225-15039469 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 75, 9 |
| Conread position: | 29-271 |
| Cow position: | chr22:15959813-15960058 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 65, 61 |
| Conread position: | 32-268 |
| Cow position: | chr22:32480530-32480749 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 33-216 |
| Cow position: | chr22:12974439-12974625 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 65, 20 |
| Conread position: | 33-246 |
| Cow position: | chr22:44386456-44386660 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 33-251 |
| Cow position: | chr22:27171305-27171526 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 118, 20 |
| Conread position: | 33-256 |
| Cow position: | chr22:2623569-2623786 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 33-271 |
| Cow position: | chr22:1484810-1484575 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 35-216 |
| Cow position: | chr22:26166672-26166848 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 36-247 |
| Cow position: | chr22:36761575-36761370 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 41-246 |
| Cow position: | chr22:14820619-14820813 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 137, 15 |
| Conread position: | 49-246 |
| Cow position: | chr22:22613045-22612849 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 49, 7 |
| Conread position: | 53-267 |
| Cow position: | chr22:11489464-11489261 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 55-250 |
| Cow position: | chr22:11370658-11370857 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 55-256 |
| Cow position: | chr22:33949070-33949275 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 56-255 |
| Cow position: | chr22:34930816-34931019 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 59-271 |
| Cow position: | chr22:47927683-47927475 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 62-256 |
| Cow position: | chr22:23249785-23249984 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 19 |
Show alignments to all cow chromosomes.