Cow genome map


           Conread name:
           Blo2-AR038F03PBC30AF03S
        

               Conread position:
               1-158
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               77, 40
               

               Conread position:
               1-163
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 56
               

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               99, 52
               

               Conread position:
               1-188
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 8
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               77, 52
               

               Conread position:
               1-233
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 51
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 46
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               14, 54
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 46
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               15, 57
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               77, 45
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               85, 19
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 7
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               98, 45
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 56
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               97, 54
               

               Conread position:
               1-305
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               20, 56
               

               Conread position:
               3-246
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               11, 52
               

               Conread position:
               4-211
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               11, 27
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               76, 49
               

               Conread position:
               4-272
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 16
               

               Conread position:
               5-271
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               7, 49
               

               Conread position:
               5-278
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               88, 21
               

               Conread position:
               6-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               88, 20
               

               Conread position:
               6-271
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 49
               

               Conread position:
               6-274
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               142, 13
               

               Conread position:
               6-281
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               14, 49
               

               Conread position:
               8-283
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               9-166
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               12, 93
               

               Conread position:
               9-244
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 44
               

               Conread position:
               9-250
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 48
               

               Conread position:
               11-271
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 43
               

               Conread position:
               12-246
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               86, 41
               

               Conread position:
               12-271
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 41
               

               Conread position:
               13-271
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               85, 43
               

               Conread position:
               13-271
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               85, 40
               

               Conread position:
               13-271
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               85, 35
               

               Conread position:
               13-272
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               94, 25
               

               Conread position:
               14-223
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               40, 78
               

               Conread position:
               14-252
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               14-254
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               15-227
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               19-271
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               59, 27
               

               Conread position:
               20-246
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               75, 6
               

               Conread position:
               20-259
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               233, 33
               

               Conread position:
               21-252
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               82, 35
               

               Conread position:
               22-255
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               22-271
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               76, 31
               

               Conread position:
               22-271
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               23-254
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               75, 31
               

               Conread position:
               23-265
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               70, 9
               

               Conread position:
               23-268
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               75, 9
               

               Conread position:
               29-271
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               65, 61
               

               Conread position:
               32-268
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               33-216
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               65, 20
               

               Conread position:
               33-246
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               33-251
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               118, 20
               

               Conread position:
               33-256
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               61, 22
               

               Conread position:
               33-271
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 20
               

               Conread position:
               35-216
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               59, 18
               

               Conread position:
               36-247
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               45, 17
               

               Conread position:
               41-246
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               137, 15
               

               Conread position:
               49-246
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               49, 7
               

               Conread position:
               53-267
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               55-250
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               55-256
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               56-255
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               42, 25
               

               Conread position:
               59-271
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               62-256
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               32, 19
               
Show alignments to all cow chromosomes.