Cow genome map
| Conread name: | Blo2-AR038F03PBC30AF03S |
| Conread position: | 1-190 |
| Cow position: | chr23:39028767-39028583 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 95, 25 |
| Conread position: | 1-226 |
| Cow position: | chr23:27544814-27544595 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-255 |
| Cow position: | chr23:187165-186905 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 52 |
| Conread position: | 1-255 |
| Cow position: | chr23:36309409-36309161 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 1-256 |
| Cow position: | chr23:33711747-33711500 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 230, 8 |
| Conread position: | 1-264 |
| Cow position: | chr23:10014527-10014270 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 1-267 |
| Cow position: | chr23:18367687-18367418 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 45 |
| Conread position: | 1-268 |
| Cow position: | chr23:11129220-11128953 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 1-271 |
| Cow position: | chr23:7402689-7402424 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 1-271 |
| Cow position: | chr23:18698035-18698308 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 134 |
| Conread position: | 1-274 |
| Cow position: | chr23:19758642-19758908 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 128, 26 |
| Conread position: | 2-199 |
| Cow position: | chr23:1742343-1742147 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 74, 51 |
| Conread position: | 2-272 |
| Cow position: | chr23:10554024-10554294 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 7 |
| Conread position: | 2-275 |
| Cow position: | chr23:25408818-25408552 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 256, 5 |
| Conread position: | 3-179 |
| Cow position: | chr23:33570120-33569945 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 145, 19 |
| Conread position: | 4-238 |
| Cow position: | chr23:22530431-22530666 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 138, 36 |
| Conread position: | 4-256 |
| Cow position: | chr23:34416547-34416305 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 91, 25 |
| Conread position: | 6-271 |
| Cow position: | chr23:18802288-18802555 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 6-280 |
| Cow position: | chr23:1647600-1647340 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 92, 20 |
| Conread position: | 7-199 |
| Cow position: | chr23:22399381-22399191 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 91, 39 |
| Conread position: | 9-255 |
| Cow position: | chr23:7845272-7845020 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 46 |
| Conread position: | 9-279 |
| Cow position: | chr23:3208639-3208910 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 10-215 |
| Cow position: | chr23:3955390-3955193 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 97, 43 |
| Conread position: | 10-243 |
| Cow position: | chr23:4810732-4810496 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 84, 43 |
| Conread position: | 11-246 |
| Cow position: | chr23:15287160-15287391 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 74, 42 |
| Conread position: | 12-223 |
| Cow position: | chr23:35254262-35254472 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 83, 45 |
| Conread position: | 12-257 |
| Cow position: | chr23:3247561-3247320 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 41 |
| Conread position: | 12-271 |
| Cow position: | chr23:30662656-30662906 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 41 |
| Conread position: | 12-271 |
| Cow position: | chr23:33601551-33601802 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 41 |
| Conread position: | 12-273 |
| Cow position: | chr23:4608405-4608666 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 88, 34 |
| Conread position: | 14-233 |
| Cow position: | chr23:13599319-13599098 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 84, 42 |
| Conread position: | 14-252 |
| Cow position: | chr23:20194942-20195181 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 82, 39 |
| Conread position: | 14-256 |
| Cow position: | chr23:26949174-26948923 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 84, 39 |
| Conread position: | 14-267 |
| Cow position: | chr23:9594856-9595107 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 211, 39 |
| Conread position: | 14-271 |
| Cow position: | chr23:40781298-40781046 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 20-268 |
| Cow position: | chr23:24867274-24867023 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 78, 36 |
| Conread position: | 21-283 |
| Cow position: | chr23:2501888-2502143 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 12 |
| Conread position: | 22-252 |
| Cow position: | chr23:26986306-26986537 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 126, 33 |
| Conread position: | 23-236 |
| Cow position: | chr23:33717575-33717791 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 75, 30 |
| Conread position: | 23-268 |
| Cow position: | chr23:33232944-33233184 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 28-255 |
| Cow position: | chr23:360955-361175 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 33-281 |
| Cow position: | chr23:7175574-7175329 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 19 |
| Conread position: | 33-281 |
| Cow position: | chr23:7392336-7392577 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 20 |
| Conread position: | 33-283 |
| Cow position: | chr23:16563796-16563549 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 22 |
| Conread position: | 34-271 |
| Cow position: | chr23:9268547-9268308 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 40-220 |
| Cow position: | chr23:30307859-30307677 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 65, 15 |
| Conread position: | 55-254 |
| Cow position: | chr23:1428746-1428552 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 35 |
| Conread position: | 55-254 |
| Cow position: | chr23:38414028-38414222 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 162 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 94, 46 |
| Conread position: | 55-267 |
| Cow position: | chr23:1690726-1690510 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 38, 26 |
| Conread position: | 60-198 |
| Cow position: | chr23:1776700-1776840 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 38, 20 |
| Conread position: | 64-239 |
| Cow position: | chr23:9599421-9599252 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 64-254 |
| Cow position: | chr23:4338678-4338871 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 34, 17 |
Show alignments to all cow chromosomes.