Cow genome map
| Conread name: | Blo2-AR038F03PBC30AF03S |
| Conread position: | 1-172 |
| Cow position: | chr24:352646-352814 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 1-184 |
| Cow position: | chr24:16509930-16509751 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 98, 11 |
| Conread position: | 1-222 |
| Cow position: | chr24:27040009-27039779 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 12, 46 |
| Conread position: | 1-255 |
| Cow position: | chr24:40130088-40129833 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 52 |
| Conread position: | 1-256 |
| Cow position: | chr24:18331678-18331443 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 97, 8 |
| Conread position: | 1-268 |
| Cow position: | chr24:29595849-29596116 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 1-268 |
| Cow position: | chr24:34565084-34564823 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 8 |
| Conread position: | 1-271 |
| Cow position: | chr24:27052534-27052800 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 1-271 |
| Cow position: | chr24:27906397-27906120 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 1-276 |
| Cow position: | chr24:3493844-3493578 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 11 |
| Conread position: | 2-271 |
| Cow position: | chr24:29782124-29781854 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 51 |
| Conread position: | 3-271 |
| Cow position: | chr24:35332681-35332411 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 4-190 |
| Cow position: | chr24:18771233-18771414 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 90, 28 |
| Conread position: | 4-244 |
| Cow position: | chr24:43364316-43364082 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 16 |
| Conread position: | 4-256 |
| Cow position: | chr24:35794780-35795034 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 23 |
| Conread position: | 6-197 |
| Cow position: | chr24:33221985-33222174 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 6-265 |
| Cow position: | chr24:6913808-6914066 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 8-238 |
| Cow position: | chr24:41755817-41755591 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 15 |
| Conread position: | 10-154 |
| Cow position: | chr24:30226895-30226749 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 5, 44 |
| Conread position: | 10-259 |
| Cow position: | chr24:30483998-30484238 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 36 |
| Conread position: | 10-278 |
| Cow position: | chr24:28553599-28553861 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 11-199 |
| Cow position: | chr24:25194220-25194030 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 79, 12 |
| Conread position: | 11-253 |
| Cow position: | chr24:27719804-27720042 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 11-271 |
| Cow position: | chr24:28354101-28353851 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 12-240 |
| Cow position: | chr24:40850114-40849887 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 66, 41 |
| Conread position: | 12-249 |
| Cow position: | chr24:35074043-35073806 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 41 |
| Conread position: | 20-267 |
| Cow position: | chr24:18405378-18405608 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 194 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 20-281 |
| Cow position: | chr24:27267576-27267318 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 33 |
| Conread position: | 21-268 |
| Cow position: | chr24:31159562-31159321 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 29, 114 |
| Conread position: | 29-252 |
| Cow position: | chr24:591847-591621 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 66, 24 |
| Conread position: | 33-253 |
| Cow position: | chr24:37246282-37246508 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 33-274 |
| Cow position: | chr24:27543547-27543787 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 33-278 |
| Cow position: | chr24:6071527-6071281 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 53, 72 |
| Conread position: | 39-275 |
| Cow position: | chr24:27465654-27465885 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 55-238 |
| Cow position: | chr24:18374686-18374499 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 55-271 |
| Cow position: | chr24:2993016-2993238 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 31, 42 |
| Conread position: | 56-271 |
| Cow position: | chr24:5754745-5754533 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 60-252 |
| Cow position: | chr24:18732219-18732412 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 9, 22 |
Show alignments to all cow chromosomes.