Cow genome map
| Conread name: | Blo2-AR038F03PBC30AF03S |
| Conread position: | 1-164 |
| Cow position: | chr25:15440796-15440958 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 1-178 |
| Cow position: | chr25:3983023-3982851 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 97, 21 |
| Conread position: | 1-243 |
| Cow position: | chr25:16001543-16001779 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 1-244 |
| Cow position: | chr25:8918294-8918537 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 85, 53 |
| Conread position: | 1-251 |
| Cow position: | chr25:24452193-24452434 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 1-252 |
| Cow position: | chr25:21894902-21895150 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 8 |
| Conread position: | 1-254 |
| Cow position: | chr25:33978231-33978470 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 1-255 |
| Cow position: | chr25:14513096-14512846 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 21, 146 |
| Conread position: | 1-257 |
| Cow position: | chr25:36081859-36081603 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 31 |
| Conread position: | 1-271 |
| Cow position: | chr25:20395174-20394921 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-281 |
| Cow position: | chr25:26654893-26654609 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 52 |
| Conread position: | 3-223 |
| Cow position: | chr25:38425343-38425127 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 84, 53 |
| Conread position: | 4-224 |
| Cow position: | chr25:7329526-7329305 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 90, 26 |
| Conread position: | 4-271 |
| Cow position: | chr25:36779478-36779210 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 50 |
| Conread position: | 4-273 |
| Cow position: | chr25:36036802-36037069 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 29 |
| Conread position: | 4-279 |
| Cow position: | chr25:6424606-6424879 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 6-198 |
| Cow position: | chr25:20133333-20133530 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 6-268 |
| Cow position: | chr25:26112246-26111999 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 92, 47 |
| Conread position: | 8-186 |
| Cow position: | chr25:27801262-27801089 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 154, 18 |
| Conread position: | 9-146 |
| Cow position: | chr25:8485517-8485656 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 68, 44 |
| Conread position: | 9-244 |
| Cow position: | chr25:36026984-36026748 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 44 |
| Conread position: | 12-174 |
| Cow position: | chr25:11315878-11315722 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 69, 39 |
| Conread position: | 12-255 |
| Cow position: | chr25:10365780-10366022 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 41 |
| Conread position: | 13-237 |
| Cow position: | chr25:24669467-24669682 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 85, 13 |
| Conread position: | 13-257 |
| Cow position: | chr25:36535465-36535704 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 33 |
| Conread position: | 14-151 |
| Cow position: | chr25:26679198-26679062 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 41 |
| Conread position: | 14-171 |
| Cow position: | chr25:22332735-22332578 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 14-281 |
| Cow position: | chr25:11436841-11437100 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 260, 12 |
| Conread position: | 19-271 |
| Cow position: | chr25:6474131-6474386 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 27 |
| Conread position: | 20-281 |
| Cow position: | chr25:2111032-2110785 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 78, 34 |
| Conread position: | 21-254 |
| Cow position: | chr25:20008097-20007871 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 77, 20 |
| Conread position: | 22-219 |
| Cow position: | chr25:6255974-6256172 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 72, 19 |
| Conread position: | 22-267 |
| Cow position: | chr25:20496498-20496257 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 32 |
| Conread position: | 27-278 |
| Cow position: | chr25:41354346-41354602 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 33-234 |
| Cow position: | chr25:19129805-19129604 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 193, 171 |
| Conread position: | 34-255 |
| Cow position: | chr25:21266961-21266736 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 35-162 |
| Cow position: | chr25:14931810-14931940 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 37-237 |
| Cow position: | chr25:2596133-2595922 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 46-256 |
| Cow position: | chr25:17702032-17702234 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 172, 9 |
| Conread position: | 55-243 |
| Cow position: | chr25:4547786-4547978 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 56-271 |
| Cow position: | chr25:17975438-17975653 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 42, 22 |
| Conread position: | 56-281 |
| Cow position: | chr25:2414749-2414539 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 91 |
Show alignments to all cow chromosomes.