Cow genome map
| Conread name: | Blo2-AR038F03PBC30AF03S |
| Conread position: | 1-205 |
| Cow position: | chr27:9169674-9169470 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 1-237 |
| Cow position: | chr27:26807588-26807357 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-238 |
| Cow position: | chr27:18593241-18593475 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 1-250 |
| Cow position: | chr27:2957378-2957627 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 11 |
| Conread position: | 1-251 |
| Cow position: | chr27:20369002-20369259 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 90, 55 |
| Conread position: | 1-268 |
| Cow position: | chr27:1636963-1636707 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 85, 11 |
| Conread position: | 1-268 |
| Cow position: | chr27:14902681-14902412 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 1-268 |
| Cow position: | chr27:24999768-24999499 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 19 |
| Conread position: | 1-276 |
| Cow position: | chr27:27064467-27064195 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 150, 9 |
| Conread position: | 2-237 |
| Cow position: | chr27:19647968-19647738 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 2-281 |
| Cow position: | chr27:15867369-15867639 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 74, 38 |
| Conread position: | 3-244 |
| Cow position: | chr27:17926648-17926424 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 83, 50 |
| Conread position: | 3-248 |
| Cow position: | chr27:18558331-18558581 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 11, 50 |
| Conread position: | 3-274 |
| Cow position: | chr27:13251982-13252252 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 143, 23 |
| Conread position: | 4-190 |
| Cow position: | chr27:27270564-27270378 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 61, 42 |
| Conread position: | 4-253 |
| Cow position: | chr27:4672993-4673243 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 94, 49 |
| Conread position: | 4-264 |
| Cow position: | chr27:27020129-27019867 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 23 |
| Conread position: | 6-233 |
| Cow position: | chr27:27003298-27003079 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 6-271 |
| Cow position: | chr27:6550433-6550691 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 7-254 |
| Cow position: | chr27:19660912-19661166 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 71, 39 |
| Conread position: | 7-271 |
| Cow position: | chr27:26424608-26424349 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 91, 25 |
| Conread position: | 9-253 |
| Cow position: | chr27:1183898-1183654 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 67, 45 |
| Conread position: | 9-271 |
| Cow position: | chr27:31372999-31372740 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 47 |
| Conread position: | 9-278 |
| Cow position: | chr27:7958861-7958586 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 11 |
| Conread position: | 10-271 |
| Cow position: | chr27:28518275-28518525 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 11-271 |
| Cow position: | chr27:4386080-4385825 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 42 |
| Conread position: | 12-202 |
| Cow position: | chr27:13841355-13841548 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 74, 91 |
| Conread position: | 12-237 |
| Cow position: | chr27:30914989-30915207 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 12-242 |
| Cow position: | chr27:13197902-13198127 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 72 |
| Conread position: | 12-252 |
| Cow position: | chr27:28038359-28038116 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 143, 43 |
| Conread position: | 12-254 |
| Cow position: | chr27:12596748-12596980 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 86, 14 |
| Conread position: | 12-269 |
| Cow position: | chr27:20283624-20283869 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 86, 41 |
| Conread position: | 12-271 |
| Cow position: | chr27:23128438-23128694 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 13-234 |
| Cow position: | chr27:20354568-20354783 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 20-256 |
| Cow position: | chr27:22498547-22498780 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 184, 33 |
| Conread position: | 20-265 |
| Cow position: | chr27:29399805-29400053 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 21-234 |
| Cow position: | chr27:29250869-29251083 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 69, 35 |
| Conread position: | 21-254 |
| Cow position: | chr27:19577666-19577897 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 53, 6 |
| Conread position: | 21-268 |
| Cow position: | chr27:536456-536694 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 22-255 |
| Cow position: | chr27:24321178-24321412 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 76, 31 |
| Conread position: | 32-271 |
| Cow position: | chr27:10979865-10980104 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 21 |
| Conread position: | 41-264 |
| Cow position: | chr27:28018344-28018570 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 55-253 |
| Cow position: | chr27:22179770-22179575 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 156 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 52, 35 |
| Conread position: | 67-221 |
| Cow position: | chr27:20037090-20036938 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 15, 34 |
Show alignments to all cow chromosomes.