Cow genome map
| Conread name: | Blo2-AR038F03PBC30AF03S |
| Conread position: | 1-234 |
| Cow position: | chr28:25249343-25249114 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 1-240 |
| Cow position: | chr28:13865835-13865598 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 1-241 |
| Cow position: | chr28:25283189-25282959 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 135, 18 |
| Conread position: | 1-267 |
| Cow position: | chr28:23007741-23008002 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 13, 56 |
| Conread position: | 1-271 |
| Cow position: | chr28:9390374-9390643 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 54 |
| Conread position: | 1-271 |
| Cow position: | chr28:21598263-21598531 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-281 |
| Cow position: | chr28:10606636-10606902 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 1-281 |
| Cow position: | chr28:21380870-21380591 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 1-284 |
| Cow position: | chr28:20313266-20312984 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 1-284 |
| Cow position: | chr28:26743615-26743331 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 1-285 |
| Cow position: | chr28:4841408-4841689 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 85, 51 |
| Conread position: | 2-251 |
| Cow position: | chr28:22739780-22739544 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 96, 17 |
| Conread position: | 2-271 |
| Cow position: | chr28:2124418-2124161 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 63, 52 |
| Conread position: | 3-237 |
| Cow position: | chr28:24343359-24343125 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 110, 54 |
| Conread position: | 3-271 |
| Cow position: | chr28:16085312-16085047 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 42 |
| Conread position: | 4-246 |
| Cow position: | chr28:33052019-33051767 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 4-256 |
| Cow position: | chr28:19026021-19026268 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 11, 55 |
| Conread position: | 5-274 |
| Cow position: | chr28:5552957-5553207 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 200, 15 |
| Conread position: | 7-255 |
| Cow position: | chr28:16243772-16244021 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 7-271 |
| Cow position: | chr28:11752157-11752423 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 16, 49 |
| Conread position: | 8-281 |
| Cow position: | chr28:27218307-27218034 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 90, 12 |
| Conread position: | 9-271 |
| Cow position: | chr28:18591249-18590992 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 134, 17 |
| Conread position: | 10-144 |
| Cow position: | chr28:30746746-30746879 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 5, 30 |
| Conread position: | 10-184 |
| Cow position: | chr28:26982755-26982938 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 68, 43 |
| Conread position: | 11-264 |
| Cow position: | chr28:2960853-2961093 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 87, 44 |
| Conread position: | 11-271 |
| Cow position: | chr28:3256778-3256523 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 87, 42 |
| Conread position: | 12-171 |
| Cow position: | chr28:28903688-28903845 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 41 |
| Conread position: | 12-281 |
| Cow position: | chr28:25727350-25727091 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 74, 41 |
| Conread position: | 13-318 |
| Cow position: | chr28:18354345-18354638 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 20-223 |
| Cow position: | chr28:12951401-12951202 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 76, 33 |
| Conread position: | 20-273 |
| Cow position: | chr28:8408706-8408455 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 75, 27 |
| Conread position: | 21-221 |
| Cow position: | chr28:33163493-33163696 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 127, 32 |
| Conread position: | 21-240 |
| Cow position: | chr28:34636639-34636431 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 157, 35 |
| Conread position: | 21-273 |
| Cow position: | chr28:11451493-11451746 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 22-202 |
| Cow position: | chr28:4884294-4884476 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 129, 33 |
| Conread position: | 29-244 |
| Cow position: | chr28:9285411-9285629 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 24 |
| Conread position: | 32-219 |
| Cow position: | chr28:13447657-13447482 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 33-199 |
| Cow position: | chr28:27313784-27313954 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 33-250 |
| Cow position: | chr28:24367973-24368208 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 65, 20 |
| Conread position: | 33-278 |
| Cow position: | chr28:15272303-15272546 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 34-271 |
| Cow position: | chr28:22132884-22132648 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 66, 56 |
| Conread position: | 39-182 |
| Cow position: | chr28:23724502-23724645 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 55-199 |
| Cow position: | chr28:8935875-8935727 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 35 |
| Conread position: | 56-247 |
| Cow position: | chr28:16370139-16370328 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 56-271 |
| Cow position: | chr28:22371740-22371954 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 42, 25 |
Show alignments to all cow chromosomes.