Cow genome map

Conread name: Blo2-AR038F03PBC30AF03S

Conread position: 1-187
Cow position:
Alignm length: 190
Alignm identity: 148
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 48, 18

Conread position: 1-188
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 97, 54

Conread position: 1-194
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 56

Conread position: 1-202
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 77, 52

Conread position: 1-229
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 53

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 185
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 39, 53

Conread position: 1-254
Cow position:
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 53

Conread position: 1-254
Cow position:
Alignm length: 255
Alignm identity: 184
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 93, 25

Conread position: 1-256
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 77, 11

Conread position: 1-256
Cow position:
Alignm length: 259
Alignm identity: 192
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 244, 53

Conread position: 1-264
Cow position:
Alignm length: 266
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 40

Conread position: 1-264
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 36

Conread position: 1-267
Cow position:
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 52

Conread position: 1-268
Cow position:
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 37

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 1-271
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 1-271
Cow position:
Alignm length: 284
Alignm identity: 204
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 49, 0

Conread position: 1-281
Cow position:
Alignm length: 284
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 45

Conread position: 1-281
Cow position:
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 45

Conread position: 1-284
Cow position:
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 11

Conread position: 2-237
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 51

Conread position: 2-252
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 2-268
Cow position:
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 51

Conread position: 2-279
Cow position:
Alignm length: 285
Alignm identity: 204
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 61, 219

Conread position: 3-246
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 95, 29

Conread position: 3-271
Cow position:
Alignm length: 273
Alignm identity: 192
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 91, 50

Conread position: 3-272
Cow position:
Alignm length: 273
Alignm identity: 202
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 25, 53

Conread position: 3-281
Cow position:
Alignm length: 286
Alignm identity: 202
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 23, 52

Conread position: 4-197
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 94, 49

Conread position: 4-227
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 94, 16

Conread position: 4-271
Cow position:
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 49

Conread position: 4-281
Cow position:
Alignm length: 282
Alignm identity: 204
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 90, 21

Conread position: 4-281
Cow position:
Alignm length: 280
Alignm identity: 193
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 94, 37

Conread position: 6-215
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 88, 49

Conread position: 6-251
Cow position:
Alignm length: 249
Alignm identity: 186
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 17, 50

Conread position: 6-271
Cow position:
Alignm length: 267
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 213, 46

Conread position: 6-293
Cow position:
Alignm length: 291
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 52

Conread position: 7-250
Cow position:
Alignm length: 249
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 40

Conread position: 8-252
Cow position:
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 9-158
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 39

Conread position: 9-225
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 28

Conread position: 9-237
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 20, 49

Conread position: 9-255
Cow position:
Alignm length: 248
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 35

Conread position: 9-271
Cow position:
Alignm length: 270
Alignm identity: 198
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 13, 46

Conread position: 9-280
Cow position:
Alignm length: 275
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 44

Conread position: 9-281
Cow position:
Alignm length: 274
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 95, 46

Conread position: 10-271
Cow position:
Alignm length: 268
Alignm identity: 196
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 83, 23

Conread position: 11-248
Cow position:
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 42

Conread position: 11-255
Cow position:
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 41

Conread position: 11-260
Cow position:
Alignm length: 251
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 46

Conread position: 11-268
Cow position:
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 42

Conread position: 11-271
Cow position:
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 12-176
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 38

Conread position: 12-178
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 41

Conread position: 12-271
Cow position:
Alignm length: 262
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 123, 29

Conread position: 13-189
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 85, 40

Conread position: 13-289
Cow position:
Alignm length: 285
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 40

Conread position: 14-226
Cow position:
Alignm length: 219
Alignm identity: 170
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 73, 39

Conread position: 20-190
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 20-227
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 32, 13

Conread position: 20-244
Cow position:
Alignm length: 230
Alignm identity: 177
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 78, 33

Conread position: 20-247
Cow position:
Alignm length: 232
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 6

Conread position: 20-248
Cow position:
Alignm length: 231
Alignm identity: 173
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 39, 33

Conread position: 20-256
Cow position:
Alignm length: 239
Alignm identity: 178
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 80, 31

Conread position: 20-268
Cow position:
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 32

Conread position: 22-254
Cow position:
Alignm length: 234
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 31

Conread position: 22-275
Cow position:
Alignm length: 256
Alignm identity: 193
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 76, 34

Conread position: 22-276
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 76, 23

Conread position: 23-256
Cow position:
Alignm length: 234
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 23-278
Cow position:
Alignm length: 256
Alignm identity: 185
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 26-228
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 14

Conread position: 26-254
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 28-176
Cow position:
Alignm length: 149
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 28-254
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 65, 28

Conread position: 28-268
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 31, 25

Conread position: 28-271
Cow position:
Alignm length: 250
Alignm identity: 180
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 70, 25

Conread position: 28-279
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 70, 27

Conread position: 31-243
Cow position:
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 159

Conread position: 32-212
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 24

Conread position: 33-179
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 20

Conread position: 33-190
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 20

Conread position: 33-217
Cow position:
Alignm length: 194
Alignm identity: 151
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 20

Conread position: 33-246
Cow position:
Alignm length: 219
Alignm identity: 171
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 65, 22

Conread position: 33-250
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 65, 22

Conread position: 33-271
Cow position:
Alignm length: 244
Alignm identity: 183
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 61, 23

Conread position: 33-271
Cow position:
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 20

Conread position: 49-252
Cow position:
Alignm length: 209
Alignm identity: 161
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 41

Conread position: 53-281
Cow position:
Alignm length: 236
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 54

Conread position: 55-253
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 164, 0

Conread position: 55-254
Cow position:
Alignm length: 204
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 55-266
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 87, 169

Conread position: 55-271
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 43, 26

Conread position: 55-289
Cow position:
Alignm length: 240
Alignm identity: 179
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 43, 23

Conread position: 56-226
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 58-225
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 25

Conread position: 60-271
Cow position:
Alignm length: 213
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 30

Conread position: 62-254
Cow position:
Alignm length: 198
Alignm identity: 151
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 19

Conread position: 63-243
Cow position:
Alignm length: 182
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 27

Conread position: 63-278
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 30, 18

Conread position: 95-283
Cow position:
Alignm length: 190
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Show alignments to all cow chromosomes.