Cow genome map


           Conread name:
           Blo2-AR038F03PBC30AF03S
        

               Conread position:
               1-145
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               30, 8
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               99, 52
               

               Conread position:
               1-183
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               149, 52
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               96, 52
               

               Conread position:
               1-223
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               20, 55
               

               Conread position:
               1-228
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               20, 53
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 53
               

               Conread position:
               1-249
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               97, 18
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               15, 59
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               19, 46
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 52
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-266
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               15, 55
               

               Conread position:
               1-267
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 52
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 52
               

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 8
               

               Conread position:
               1-281
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               102, 52
               

               Conread position:
               1-299
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 53
               

               Conread position:
               1-315
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 52
               

               Conread position:
               2-251
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 24
               

               Conread position:
               3-211
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 32
               

               Conread position:
               3-222
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               105, 49
               

               Conread position:
               3-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               137, 50
               

               Conread position:
               4-252
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 42
               

               Conread position:
               4-254
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               100, 52
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               4-274
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 30
               

               Conread position:
               5-236
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               22, 148
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 21
               

               Conread position:
               6-220
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               17, 50
               

               Conread position:
               6-255
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               92, 47
               

               Conread position:
               6-271
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               6-271
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               7-255
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               216, 48
               

               Conread position:
               7-265
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 25
               

               Conread position:
               7-271
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               8-193
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               8-256
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 48
               

               Conread position:
               9-155
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               89, 44
               

               Conread position:
               9-266
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               89, 11
               

               Conread position:
               10-278
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               72, 36
               

               Conread position:
               12-182
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               50, 44
               

               Conread position:
               12-271
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 41
               

               Conread position:
               13-265
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               69, 18
               

               Conread position:
               13-281
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 39
               

               Conread position:
               14-155
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               20-180
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               78, 32
               

               Conread position:
               20-227
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               61, 33
               

               Conread position:
               20-246
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 35
               

               Conread position:
               20-284
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 33
               

               Conread position:
               20-335
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               128, 6
               

               Conread position:
               21-235
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               125, 9
               

               Conread position:
               21-268
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 32
               

               Conread position:
               22-202
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               22-266
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               22-271
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               76, 13
               

               Conread position:
               22-277
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 31
               

               Conread position:
               23-251
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               23-280
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               125, 18
               

               Conread position:
               23-281
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 60
               

               Conread position:
               27-271
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               71, 28
               

               Conread position:
               28-271
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               70, 25
               

               Conread position:
               29-193
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               47, 78
               

               Conread position:
               29-269
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               53, 75
               

               Conread position:
               29-271
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               66, 27
               

               Conread position:
               30-193
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 23
               

               Conread position:
               32-246
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               33-203
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               110, 23
               

               Conread position:
               39-252
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               59, 14
               

               Conread position:
               46-218
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               111, 95
               

               Conread position:
               46-264
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               53, 44
               

               Conread position:
               55-271
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               64-248
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               64-254
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               34, 26
               
Show alignments to all cow chromosomes.