Cow genome map
| Conread name: | Blo2-AR038F03PBC30AF03S |
| Conread position: | 1-187 |
| Cow position: | chr8:4500487-4500298 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 67, 11 |
| Conread position: | 1-190 |
| Cow position: | chr8:30463387-30463200 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 75 |
| Conread position: | 1-194 |
| Cow position: | chr8:30893011-30893195 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 88, 7 |
| Conread position: | 1-214 |
| Cow position: | chr8:37148117-37147903 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 93, 52 |
| Conread position: | 1-222 |
| Cow position: | chr8:39592583-39592365 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 85, 45 |
| Conread position: | 1-244 |
| Cow position: | chr8:8323875-8324107 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-246 |
| Cow position: | chr8:8986950-8987185 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 34 |
| Conread position: | 1-246 |
| Cow position: | chr8:11612544-11612299 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 55 |
| Conread position: | 1-248 |
| Cow position: | chr8:53485694-53485456 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-251 |
| Cow position: | chr8:47664909-47665160 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 1-256 |
| Cow position: | chr8:42607284-42607527 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 86, 18 |
| Conread position: | 1-265 |
| Cow position: | chr8:23179546-23179813 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 1-271 |
| Cow position: | chr8:6232901-6233171 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 55 |
| Conread position: | 1-271 |
| Cow position: | chr8:18730442-18730163 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 39, 53 |
| Conread position: | 1-271 |
| Cow position: | chr8:24363945-24364208 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 7 |
| Conread position: | 1-278 |
| Cow position: | chr8:10297742-10298018 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 97, 18 |
| Conread position: | 1-279 |
| Cow position: | chr8:3446104-3446360 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-299 |
| Cow position: | chr8:12795819-12795512 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 42, 113 |
| Conread position: | 2-247 |
| Cow position: | chr8:7076473-7076239 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 20, 26 |
| Conread position: | 2-267 |
| Cow position: | chr8:43027661-43027924 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 80, 54 |
| Conread position: | 3-238 |
| Cow position: | chr8:2897625-2897861 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 147, 30 |
| Conread position: | 3-243 |
| Cow position: | chr8:39555974-39555731 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 95, 50 |
| Conread position: | 4-160 |
| Cow position: | chr8:44882938-44882783 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 91, 22 |
| Conread position: | 4-271 |
| Cow position: | chr8:10970824-10970554 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 4-271 |
| Cow position: | chr8:58417679-58417416 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 82, 22 |
| Conread position: | 5-254 |
| Cow position: | chr8:24952332-24952078 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 48 |
| Conread position: | 6-252 |
| Cow position: | chr8:35971840-35971591 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 21 |
| Conread position: | 6-261 |
| Cow position: | chr8:20212511-20212771 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 98 |
| Conread position: | 6-281 |
| Cow position: | chr8:38356857-38357135 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 8-155 |
| Cow position: | chr8:27731027-27730885 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 8-254 |
| Cow position: | chr8:7149705-7149942 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 70, 45 |
| Conread position: | 9-257 |
| Cow position: | chr8:37604024-37604269 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 9-271 |
| Cow position: | chr8:11606315-11606063 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 17 |
| Conread position: | 11-234 |
| Cow position: | chr8:47665710-47665929 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 67, 22 |
| Conread position: | 11-256 |
| Cow position: | chr8:35583572-35583817 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 32, 112 |
| Conread position: | 11-275 |
| Cow position: | chr8:37809638-37809905 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 79 |
| Conread position: | 11-281 |
| Cow position: | chr8:38358414-38358140 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 15 |
| Conread position: | 12-148 |
| Cow position: | chr8:5450626-5450757 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 12-281 |
| Cow position: | chr8:24390213-24390480 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 41 |
| Conread position: | 20-181 |
| Cow position: | chr8:29029302-29029470 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 79, 33 |
| Conread position: | 20-223 |
| Cow position: | chr8:35504261-35504461 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 38 |
| Conread position: | 20-281 |
| Cow position: | chr8:40888222-40888478 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 78, 36 |
| Conread position: | 22-218 |
| Cow position: | chr8:4591098-4591293 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 76, 31 |
| Conread position: | 22-229 |
| Cow position: | chr8:31646033-31646238 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 22-247 |
| Cow position: | chr8:57045522-57045748 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 72, 32 |
| Conread position: | 22-254 |
| Cow position: | chr8:20107809-20108039 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 22-265 |
| Cow position: | chr8:32093853-32093616 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 76, 33 |
| Conread position: | 23-251 |
| Cow position: | chr8:37122948-37122718 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 23-261 |
| Cow position: | chr8:17103446-17103682 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 30 |
| Conread position: | 26-266 |
| Cow position: | chr8:4563453-4563695 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 28-252 |
| Cow position: | chr8:42762462-42762682 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 28-271 |
| Cow position: | chr8:554217-554459 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 28-271 |
| Cow position: | chr8:25579504-25579268 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 33-240 |
| Cow position: | chr8:25349676-25349466 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 65, 23 |
| Conread position: | 33-243 |
| Cow position: | chr8:2953596-2953389 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 65, 20 |
| Conread position: | 33-278 |
| Cow position: | chr8:47751948-47752198 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 34-256 |
| Cow position: | chr8:10434771-10434550 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 37-284 |
| Cow position: | chr8:49721101-49720850 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 42-280 |
| Cow position: | chr8:47860982-47861218 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 46-256 |
| Cow position: | chr8:35580684-35580889 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 52, 35 |
| Conread position: | 54-218 |
| Cow position: | chr8:24905441-24905274 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 55-255 |
| Cow position: | chr8:59250675-59250469 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 55-257 |
| Cow position: | chr8:21268581-21268782 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 55-277 |
| Cow position: | chr8:798055-797833 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 55-277 |
| Cow position: | chr8:10176198-10176422 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 43, 35 |
| Conread position: | 56-271 |
| Cow position: | chr8:33432200-33431983 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 56-282 |
| Cow position: | chr8:948488-948261 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 60-205 |
| Cow position: | chr8:29917416-29917561 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 21, 31 |
| Conread position: | 60-281 |
| Cow position: | chr8:60774789-60775013 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 63-271 |
| Cow position: | chr8:4821292-4821498 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 68-256 |
| Cow position: | chr8:37376038-37376229 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 30, 22 |
Show alignments to all cow chromosomes.