Cow genome map


           Conread name:
           Blo2-AR038F03PBC30AF03S
        

               Conread position:
               1-144
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               94, 45
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               99, 89
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 47
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               97, 22
               

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 46
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 52
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 53
               

               Conread position:
               1-255
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 53
               

               Conread position:
               1-255
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               86, 29
               

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 52
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 8
               

               Conread position:
               1-267
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               97, 16
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 19
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 21
               

               Conread position:
               1-289
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 45
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               20, 46
               

               Conread position:
               2-239
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               96, 17
               

               Conread position:
               2-256
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               2-271
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               146, 7
               

               Conread position:
               2-271
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               48, 10
               

               Conread position:
               3-178
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               95, 5
               

               Conread position:
               3-269
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               3-311
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 27
               

               Conread position:
               4-171
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               144, 16
               

               Conread position:
               4-269
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 49
               

               Conread position:
               4-271
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               81, 49
               

               Conread position:
               5-234
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               89, 51
               

               Conread position:
               5-261
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               93, 51
               

               Conread position:
               5-268
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 41
               

               Conread position:
               5-281
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 41
               

               Conread position:
               5-283
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               93, 46
               

               Conread position:
               6-251
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 47
               

               Conread position:
               7-173
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               132, 13
               

               Conread position:
               7-246
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               94, 13
               

               Conread position:
               7-268
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               7-271
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 46
               

               Conread position:
               8-240
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 45
               

               Conread position:
               9-225
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               128, 47
               

               Conread position:
               9-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               142, 44
               

               Conread position:
               9-271
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               84, 17
               

               Conread position:
               10-267
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               11-256
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 42
               

               Conread position:
               11-271
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 43
               

               Conread position:
               11-271
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 43
               

               Conread position:
               12-264
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 40
               

               Conread position:
               12-271
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               13-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               13-271
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 40
               

               Conread position:
               13-271
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               41, 24
               

               Conread position:
               14-271
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 39
               

               Conread position:
               14-271
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               80, 18
               

               Conread position:
               20-264
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               78, 36
               

               Conread position:
               20-311
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               21-209
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               73, 32
               

               Conread position:
               23-268
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               81, 30
               

               Conread position:
               24-227
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               70, 32
               

               Conread position:
               24-271
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               26-250
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               72, 27
               

               Conread position:
               26-271
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               29-225
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               108, 24
               

               Conread position:
               32-225
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 21
               

               Conread position:
               33-280
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               38-229
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               47, 15
               

               Conread position:
               38-279
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               51-268
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               5, 79
               

               Conread position:
               54-239
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               55-248
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               55-264
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               61-281
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               37, 20
               

               Conread position:
               62-244
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               76, 115
               
Show alignments to all cow chromosomes.