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Cow genome map

           
Conread name:
           
Bra1-PBL_19_B02
        

               
Conread position:
               
77-404
               

               
Cow position:
               
chr16:56671035-56670692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
82-306
               

               
Cow position:
               
chr16:16933012-16933236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
89-404
               

               
Cow position:
               
chr16:45731486-45731189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
89-406
               

               
Cow position:
               
chr16:13306966-13306653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
209, 65
               

               
Conread position:
               
90-372
               

               
Cow position:
               
chr16:25170298-25170577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 21
               

               
Conread position:
               
90-404
               

               
Cow position:
               
chr16:47834832-47835133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
137, 73
               

               
Conread position:
               
92-375
               

               
Cow position:
               
chr16:14685485-14685204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
169, 62
               

               
Conread position:
               
92-395
               

               
Cow position:
               
chr16:51500838-51501135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
92-404
               

               
Cow position:
               
chr16:6344538-6344242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
93-355
               

               
Cow position:
               
chr16:44584535-44584273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
9, 115
               

               
Conread position:
               
94-271
               

               
Cow position:
               
chr16:45645788-45645607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
115, 141
               

               
Conread position:
               
94-324
               

               
Cow position:
               
chr16:35188161-35188384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
94-350
               

               
Cow position:
               
chr16:5896325-5896582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
69, 115
               

               
Conread position:
               
94-365
               

               
Cow position:
               
chr16:13578955-13578678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
94-366
               

               
Cow position:
               
chr16:50289056-50289329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
68, 184
               

               
Conread position:
               
94-367
               

               
Cow position:
               
chr16:20205364-20205643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 179
               

               
Conread position:
               
94-375
               

               
Cow position:
               
chr16:14568577-14568304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
94-403
               

               
Cow position:
               
chr16:1548968-1548666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
173, 80
               

               
Conread position:
               
94-406
               

               
Cow position:
               
chr16:4970790-4971103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
94-406
               

               
Cow position:
               
chr16:23472654-23472960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 61
               

               
Conread position:
               
94-408
               

               
Cow position:
               
chr16:47852686-47852377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
94-411
               

               
Cow position:
               
chr16:11957677-11957356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
65, 287
               

               
Conread position:
               
95-361
               

               
Cow position:
               
chr16:7504995-7505252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
95-375
               

               
Cow position:
               
chr16:11008251-11008515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
95-389
               

               
Cow position:
               
chr16:52275223-52274934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
95-396
               

               
Cow position:
               
chr16:25839526-25839820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 223
               

               
Conread position:
               
96-404
               

               
Cow position:
               
chr16:52789957-52790246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 160
               

               
Conread position:
               
100-316
               

               
Cow position:
               
chr16:48370038-48369823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 82
               

               
Conread position:
               
100-321
               

               
Cow position:
               
chr16:7549879-7550096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
100-372
               

               
Cow position:
               
chr16:16570827-16571084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
100-375
               

               
Cow position:
               
chr16:238178-238453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 134
               

               
Conread position:
               
100-376
               

               
Cow position:
               
chr16:8530972-8530694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
182, 208
               

               
Conread position:
               
100-388
               

               
Cow position:
               
chr16:16597473-16597759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
224, 55
               

               
Conread position:
               
100-394
               

               
Cow position:
               
chr16:29557715-29557419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
179, 47
               

               
Conread position:
               
100-404
               

               
Cow position:
               
chr16:29712333-29712632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
100-406
               

               
Cow position:
               
chr16:44428789-44429097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 172
               

               
Conread position:
               
105-425
               

               
Cow position:
               
chr16:29527741-29528075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
47, 176
               

               
Conread position:
               
107-305
               

               
Cow position:
               
chr16:34220103-34220303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
107-311
               

               
Cow position:
               
chr16:48493098-48493303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
48, 59
               

               
Conread position:
               
107-316
               

               
Cow position:
               
chr16:21039947-21040157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
107-321
               

               
Cow position:
               
chr16:15960372-15960158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
107-358
               

               
Cow position:
               
chr16:51112957-51112711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
107-372
               

               
Cow position:
               
chr16:48917386-48917659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 193
               

               
Conread position:
               
107-375
               

               
Cow position:
               
chr16:14754403-14754141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
122, 41
               

               
Conread position:
               
107-375
               

               
Cow position:
               
chr16:18205880-18206142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
107-375
               

               
Cow position:
               
chr16:38708911-38708649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 46
               

               
Conread position:
               
107-375
               

               
Cow position:
               
chr16:48095844-48095582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 53
               

               
Conread position:
               
107-387
               

               
Cow position:
               
chr16:13989901-13990165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
107-388
               

               
Cow position:
               
chr16:9905010-9905296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 46
               

               
Conread position:
               
107-390
               

               
Cow position:
               
chr16:49229853-49229572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
40, 90
               

               
Conread position:
               
107-394
               

               
Cow position:
               
chr16:9729120-9729404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
107-394
               

               
Cow position:
               
chr16:15370602-15370891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
60, 53
               

               
Conread position:
               
107-394
               

               
Cow position:
               
chr16:40514561-40514286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 56
               

               
Conread position:
               
107-400
               

               
Cow position:
               
chr16:9552980-9553263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 53
               

               
Conread position:
               
107-400
               

               
Cow position:
               
chr16:17142858-17143151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
200, 58
               

               
Conread position:
               
107-404
               

               
Cow position:
               
chr16:10032559-10032857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
203, 57
               

               
Conread position:
               
107-404
               

               
Cow position:
               
chr16:46433410-46433106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 51
               

               
Conread position:
               
107-437
               

               
Cow position:
               
chr16:23955911-23955580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
154, 47
               

               
Conread position:
               
109-346
               

               
Cow position:
               
chr16:54679590-54679821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
109-368
               

               
Cow position:
               
chr16:2417668-2417406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
152, 47
               

               
Conread position:
               
109-396
               

               
Cow position:
               
chr16:56231748-56232021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
109-398
               

               
Cow position:
               
chr16:40333405-40333123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 102
               

               
Conread position:
               
109-404
               

               
Cow position:
               
chr16:33596011-33595733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
39, 6
               

               
Conread position:
               
112-251
               

               
Cow position:
               
chr16:45753532-45753394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
112-253
               

               
Cow position:
               
chr16:22124042-22123906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
112-267
               

               
Cow position:
               
chr16:35937262-35937415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
112-270
               

               
Cow position:
               
chr16:18402609-18402768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
112-275
               

               
Cow position:
               
chr16:31122329-31122164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
112-290
               

               
Cow position:
               
chr16:47643339-47643511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
112-295
               

               
Cow position:
               
chr16:50667210-50667397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
112-296
               

               
Cow position:
               
chr16:41697161-41696985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
112-304
               

               
Cow position:
               
chr16:5836502-5836699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
95, 192
               

               
Conread position:
               
112-305
               

               
Cow position:
               
chr16:54226674-54226483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
186, 117
               

               
Conread position:
               
112-307
               

               
Cow position:
               
chr16:42240974-42241165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
112-311
               

               
Cow position:
               
chr16:17288871-17289072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
186, 54
               

               
Conread position:
               
112-311
               

               
Cow position:
               
chr16:20069756-20069954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
112-316
               

               
Cow position:
               
chr16:5256918-5257123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
112-317
               

               
Cow position:
               
chr16:40562155-40562359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
112-321
               

               
Cow position:
               
chr16:3114462-3114671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-321
               

               
Cow position:
               
chr16:5363820-5364033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
112-321
               

               
Cow position:
               
chr16:12501237-12501029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
112-321
               

               
Cow position:
               
chr16:18141404-18141197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
35, 111
               

               
Conread position:
               
112-321
               

               
Cow position:
               
chr16:53792894-53792687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
111, 46
               

               
Conread position:
               
112-322
               

               
Cow position:
               
chr16:8933499-8933295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
112-322
               

               
Cow position:
               
chr16:29608443-29608642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
112-322
               

               
Cow position:
               
chr16:40700804-40700604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
112-332
               

               
Cow position:
               
chr16:17903725-17903503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
40, 214
               

               
Conread position:
               
112-341
               

               
Cow position:
               
chr16:22380429-22380202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
128, 54
               

               
Conread position:
               
112-344
               

               
Cow position:
               
chr16:25386899-25387130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
55, 104
               

               
Conread position:
               
112-352
               

               
Cow position:
               
chr16:33226614-33226374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
186, 52
               

               
Conread position:
               
112-355
               

               
Cow position:
               
chr16:27659826-27659594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
112-360
               

               
Cow position:
               
chr16:47964891-47964649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
230, 34
               

               
Conread position:
               
112-367
               

               
Cow position:
               
chr16:424889-424630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
185, 52
               

               
Conread position:
               
112-368
               

               
Cow position:
               
chr16:3614670-3614917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
112-368
               

               
Cow position:
               
chr16:42242191-42241943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
112-368
               

               
Cow position:
               
chr16:45139596-45139844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
175, 54
               

               
Conread position:
               
112-372
               

               
Cow position:
               
chr16:14106570-14106828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
186, 29
               

               
Conread position:
               
112-372
               

               
Cow position:
               
chr16:31117690-31117434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
112-372
               

               
Cow position:
               
chr16:50873240-50873005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
222, 47
               

               
Conread position:
               
112-375
               

               
Cow position:
               
chr16:4910602-4910335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
112-375
               

               
Cow position:
               
chr16:10504756-10505001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
112-375
               

               
Cow position:
               
chr16:14125068-14125308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
112-375
               

               
Cow position:
               
chr16:23730002-23729731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
112-376
               

               
Cow position:
               
chr16:27701328-27701075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
155, 24
               

               
Conread position:
               
112-376
               

               
Cow position:
               
chr16:41578150-41578413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 61
               

               
Conread position:
               
112-389
               

               
Cow position:
               
chr16:27723137-27723410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 199
               

               
Conread position:
               
112-392
               

               
Cow position:
               
chr16:51598681-51598409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
226, 45
               

               
Conread position:
               
112-393
               

               
Cow position:
               
chr16:45677902-45678183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 46
               

               
Conread position:
               
112-394
               

               
Cow position:
               
chr16:4857177-4856892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
53, 118
               

               
Conread position:
               
112-394
               

               
Cow position:
               
chr16:15824520-15824235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
112-394
               

               
Cow position:
               
chr16:19047511-19047227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
170, 246
               

               
Conread position:
               
112-394
               

               
Cow position:
               
chr16:42970003-42969715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 48
               

               
Conread position:
               
112-394
               

               
Cow position:
               
chr16:51241615-51241334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
149, 35
               

               
Conread position:
               
112-395
               

               
Cow position:
               
chr16:11660522-11660265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
112-395
               

               
Cow position:
               
chr16:42078916-42078640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 48
               

               
Conread position:
               
112-396
               

               
Cow position:
               
chr16:3303950-3304242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
212, 48
               

               
Conread position:
               
112-396
               

               
Cow position:
               
chr16:17135135-17134853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
112-400
               

               
Cow position:
               
chr16:30305890-30305607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
112-401
               

               
Cow position:
               
chr16:45554367-45554648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
112-402
               

               
Cow position:
               
chr16:13611529-13611225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
187, 52
               

               
Conread position:
               
112-403
               

               
Cow position:
               
chr16:9973574-9973268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
112-404
               

               
Cow position:
               
chr16:7418310-7418588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
112-404
               

               
Cow position:
               
chr16:16842604-16842311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 35
               

               
Conread position:
               
112-404
               

               
Cow position:
               
chr16:33134866-33135141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 51
               

               
Conread position:
               
112-405
               

               
Cow position:
               
chr16:19052564-19052848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
112-405
               

               
Cow position:
               
chr16:29037836-29038135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
43, 103
               

               
Conread position:
               
112-405
               

               
Cow position:
               
chr16:34754036-34753741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 46
               

               
Conread position:
               
112-406
               

               
Cow position:
               
chr16:39474221-39473938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
253, 26
               

               
Conread position:
               
112-407
               

               
Cow position:
               
chr16:820173-820470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
190, 165
               

               
Conread position:
               
112-407
               

               
Cow position:
               
chr16:31079166-31078884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
112-412
               

               
Cow position:
               
chr16:35740794-35741106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
95, 78
               

               
Conread position:
               
112-413
               

               
Cow position:
               
chr16:38243737-38243438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
186, 52
               

               
Conread position:
               
112-416
               

               
Cow position:
               
chr16:10592359-10592677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
165, 36
               

               
Conread position:
               
112-433
               

               
Cow position:
               
chr16:18757915-18757587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
113-241
               

               
Cow position:
               
chr16:35477491-35477363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
113-289
               

               
Cow position:
               
chr16:50370521-50370694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
113-305
               

               
Cow position:
               
chr16:36203699-36203503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
113-311
               

               
Cow position:
               
chr16:48494630-48494432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
113-314
               

               
Cow position:
               
chr16:21762046-21761845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
113-317
               

               
Cow position:
               
chr16:17945445-17945651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
195, 0
               

               
Conread position:
               
113-318
               

               
Cow position:
               
chr16:12060342-12060545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 54
               

               
Conread position:
               
113-329
               

               
Cow position:
               
chr16:37669811-37669596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
185, 47
               

               
Conread position:
               
113-341
               

               
Cow position:
               
chr16:13969446-13969207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
55, 40
               

               
Conread position:
               
113-350
               

               
Cow position:
               
chr16:8323057-8322829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
113-350
               

               
Cow position:
               
chr16:11790942-11791170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
113-351
               

               
Cow position:
               
chr16:48006567-48006331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
113-359
               

               
Cow position:
               
chr16:11105478-11105720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
238, 174
               

               
Conread position:
               
113-359
               

               
Cow position:
               
chr16:33267642-33267892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
148, 41
               

               
Conread position:
               
113-372
               

               
Cow position:
               
chr16:32781291-32781556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 53
               

               
Conread position:
               
113-386
               

               
Cow position:
               
chr16:7442174-7441902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
105, 113
               

               
Conread position:
               
113-387
               

               
Cow position:
               
chr16:33704732-33705001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
113-388
               

               
Cow position:
               
chr16:32970153-32969882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
50, 99
               

               
Conread position:
               
113-388
               

               
Cow position:
               
chr16:56082437-56082162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
63, 41
               

               
Conread position:
               
113-390
               

               
Cow position:
               
chr16:14242296-14242570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
197, 51
               

               
Conread position:
               
113-390
               

               
Cow position:
               
chr16:45121964-45122244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
167, 28
               

               
Conread position:
               
113-391
               

               
Cow position:
               
chr16:8462153-8461879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 72
               

               
Conread position:
               
113-391
               

               
Cow position:
               
chr16:13689590-13689866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
113-391
               

               
Cow position:
               
chr16:42539664-42539375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
154, 113
               

               
Conread position:
               
113-393
               

               
Cow position:
               
chr16:39683174-39682894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
154, 7
               

               
Conread position:
               
113-397
               

               
Cow position:
               
chr16:8737990-8738277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 39
               

               
Conread position:
               
113-399
               

               
Cow position:
               
chr16:30186569-30186855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
184, 168
               

               
Conread position:
               
113-402
               

               
Cow position:
               
chr16:56358342-56358068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
264, 13
               

               
Conread position:
               
113-404
               

               
Cow position:
               
chr16:8068895-8068600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 46
               

               
Conread position:
               
113-404
               

               
Cow position:
               
chr16:30036160-30036452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
138, 59
               

               
Conread position:
               
113-404
               

               
Cow position:
               
chr16:40446179-40446482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 124
               

               
Conread position:
               
113-406
               

               
Cow position:
               
chr16:55683225-55683517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
113-413
               

               
Cow position:
               
chr16:52834964-52834677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
113-421
               

               
Cow position:
               
chr16:49126263-49125958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
144, 91
               

               
Conread position:
               
113-424
               

               
Cow position:
               
chr16:44744208-44743895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
160, 34
               

               
Conread position:
               
113-432
               

               
Cow position:
               
chr16:26649704-26649389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
292, 45
               

               
Conread position:
               
113-443
               

               
Cow position:
               
chr16:38905303-38904971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
154, 45
               

               
Conread position:
               
114-314
               

               
Cow position:
               
chr16:30359134-30358938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
114-317
               

               
Cow position:
               
chr16:33054557-33054353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
114-320
               

               
Cow position:
               
chr16:48340770-48340562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
46, 54
               

               
Conread position:
               
114-355
               

               
Cow position:
               
chr16:53509056-53508821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
114-372
               

               
Cow position:
               
chr16:24702779-24703034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
168, 94
               

               
Conread position:
               
114-372
               

               
Cow position:
               
chr16:39165168-39165417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
114-375
               

               
Cow position:
               
chr16:44239330-44239613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
114-388
               

               
Cow position:
               
chr16:50906399-50906678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
114-390
               

               
Cow position:
               
chr16:8494071-8493787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
114-390
               

               
Cow position:
               
chr16:11082929-11083198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
114-394
               

               
Cow position:
               
chr16:7665563-7665846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
114-394
               

               
Cow position:
               
chr16:8017894-8018163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
104, 51
               

               
Conread position:
               
114-394
               

               
Cow position:
               
chr16:24855468-24855740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
172, 109
               

               
Conread position:
               
114-400
               

               
Cow position:
               
chr16:44210638-44210345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
74, 46
               

               
Conread position:
               
114-403
               

               
Cow position:
               
chr16:8959132-8958843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
114-404
               

               
Cow position:
               
chr16:21002461-21002155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 47
               

               
Conread position:
               
114-405
               

               
Cow position:
               
chr16:7582640-7582932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
114-405
               

               
Cow position:
               
chr16:24128632-24128923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
114-406
               

               
Cow position:
               
chr16:34257113-34256818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
114-407
               

               
Cow position:
               
chr16:8242993-8242708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
114-407
               

               
Cow position:
               
chr16:12542908-12543212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
35, 51
               

               
Conread position:
               
114-431
               

               
Cow position:
               
chr16:15981470-15981149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
114-436
               

               
Cow position:
               
chr16:4852190-4851868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
114-437
               

               
Cow position:
               
chr16:53428184-53428508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
147, 39
               

               
Conread position:
               
114-438
               

               
Cow position:
               
chr16:591884-591559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
114-439
               

               
Cow position:
               
chr16:935520-935211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
153, 39
               

               
Conread position:
               
115-296
               

               
Cow position:
               
chr16:39402079-39401909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
115-305
               

               
Cow position:
               
chr16:22206999-22207194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 135
               

               
Conread position:
               
115-332
               

               
Cow position:
               
chr16:11806595-11806813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
16, 170
               

               
Conread position:
               
115-387
               

               
Cow position:
               
chr16:12108461-12108172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
115-391
               

               
Cow position:
               
chr16:45813765-45813495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
210, 21
               

               
Conread position:
               
115-397
               

               
Cow position:
               
chr16:32302077-32301792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
117, 42
               

               
Conread position:
               
115-404
               

               
Cow position:
               
chr16:22984685-22984966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
152, 45
               

               
Conread position:
               
115-409
               

               
Cow position:
               
chr16:38244698-38244398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
116-372
               

               
Cow position:
               
chr16:11135054-11134801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
116-389
               

               
Cow position:
               
chr16:54664872-54664603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
116-394
               

               
Cow position:
               
chr16:19670421-19670152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
116-395
               

               
Cow position:
               
chr16:52169983-52170260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
39, 49
               

               
Conread position:
               
116-400
               

               
Cow position:
               
chr16:33236348-33236071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
151, 55
               

               
Conread position:
               
116-403
               

               
Cow position:
               
chr16:31149318-31149590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
116-414
               

               
Cow position:
               
chr16:54710105-54709827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
117-372
               

               
Cow position:
               
chr16:26030955-26030692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
160, 41
               

               
Conread position:
               
117-413
               

               
Cow position:
               
chr16:7075843-7076145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
182, 111
               

               
Conread position:
               
120-302
               

               
Cow position:
               
chr16:42345675-42345500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
120-305
               

               
Cow position:
               
chr16:22919399-22919584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
120-311
               

               
Cow position:
               
chr16:32807360-32807171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 111
               

               
Conread position:
               
120-320
               

               
Cow position:
               
chr16:39394503-39394700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
193, 32
               

               
Conread position:
               
120-321
               

               
Cow position:
               
chr16:7980724-7980920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
120-326
               

               
Cow position:
               
chr16:5636518-5636721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 62
               

               
Conread position:
               
120-368
               

               
Cow position:
               
chr16:41752646-41752401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
120-371
               

               
Cow position:
               
chr16:54579098-54579348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
120-375
               

               
Cow position:
               
chr16:48398324-48398070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
35, 178
               

               
Conread position:
               
120-390
               

               
Cow position:
               
chr16:48956731-48957001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
120-391
               

               
Cow position:
               
chr16:33198506-33198230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
177, 89
               

               
Conread position:
               
120-394
               

               
Cow position:
               
chr16:8366898-8366619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
120-394
               

               
Cow position:
               
chr16:47820499-47820781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 105
               

               
Conread position:
               
120-396
               

               
Cow position:
               
chr16:42977395-42977682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
36, 174
               

               
Conread position:
               
120-403
               

               
Cow position:
               
chr16:23681296-23681575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
120-404
               

               
Cow position:
               
chr16:46548344-46548048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 290
               

               
Conread position:
               
120-412
               

               
Cow position:
               
chr16:18354024-18353731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
219, 44
               

               
Conread position:
               
121-321
               

               
Cow position:
               
chr16:496442-496244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
121-375
               

               
Cow position:
               
chr16:31561685-31561941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
121-394
               

               
Cow position:
               
chr16:10020470-10020748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
8, 35
               

               
Conread position:
               
121-400
               

               
Cow position:
               
chr16:20824417-20824687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
185, 18
               

               
Conread position:
               
121-400
               

               
Cow position:
               
chr16:23719046-23718764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
121-402
               

               
Cow position:
               
chr16:4059288-4059574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 244
               

               
Conread position:
               
122-391
               

               
Cow position:
               
chr16:8065950-8065682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
145, 8
               

               
Conread position:
               
122-404
               

               
Cow position:
               
chr16:42398963-42398672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
122-426
               

               
Cow position:
               
chr16:23058498-23058192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
145, 10
               

               
Conread position:
               
122-434
               

               
Cow position:
               
chr16:27728181-27728494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 187
               

               
Conread position:
               
123-317
               

               
Cow position:
               
chr16:19003588-19003404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
174, 42
               

               
Conread position:
               
123-372
               

               
Cow position:
               
chr16:3047406-3047158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
123-372
               

               
Cow position:
               
chr16:4275806-4275558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
123-375
               

               
Cow position:
               
chr16:33645948-33646202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
123-438
               

               
Cow position:
               
chr16:12320155-12320472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 289
               

               
Conread position:
               
124-305
               

               
Cow position:
               
chr16:4626456-4626275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
124-389
               

               
Cow position:
               
chr16:9985463-9985201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
32, 216
               

               
Conread position:
               
125-405
               

               
Cow position:
               
chr16:11584460-11584191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
125-406
               

               
Cow position:
               
chr16:22772915-22773191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
125-408
               

               
Cow position:
               
chr16:45294480-45294766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 46
               

               
Conread position:
               
125-409
               

               
Cow position:
               
chr16:51710194-51709929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
126-375
               

               
Cow position:
               
chr16:8239929-8239677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
126-394
               

               
Cow position:
               
chr16:31880824-31880545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
181, 32
               

               
Conread position:
               
127-394
               

               
Cow position:
               
chr16:55233623-55233884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
127-404
               

               
Cow position:
               
chr16:19643824-19644101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
10, 167
               

               
Conread position:
               
127-433
               

               
Cow position:
               
chr16:36286743-36286445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
128-356
               

               
Cow position:
               
chr16:11615305-11615075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
130-406
               

               
Cow position:
               
chr16:7136406-7136130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
132-390
               

               
Cow position:
               
chr16:28444544-28444284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
135, 28
               

               
Conread position:
               
132-396
               

               
Cow position:
               
chr16:42444102-42444368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
172, 26
               

               
Conread position:
               
136-387
               

               
Cow position:
               
chr16:7626109-7626352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
137-401
               

               
Cow position:
               
chr16:56243936-56243671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
226, 27
               

               
Conread position:
               
137-440
               

               
Cow position:
               
chr16:13696730-13696430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
130, 15
               

               
Conread position:
               
139-367
               

               
Cow position:
               
chr16:47518795-47519011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
142, 159
               

               
Conread position:
               
140-403
               

               
Cow position:
               
chr16:20921107-20921367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
141-375
               

               
Cow position:
               
chr16:12010047-12010285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
142-408
               

               
Cow position:
               
chr16:15407600-15407337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
125, 18
               

               
Conread position:
               
146-306
               

               
Cow position:
               
chr16:12133818-12133977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
146-389
               

               
Cow position:
               
chr16:39516640-39516395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
147-394
               

               
Cow position:
               
chr16:7011030-7011278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
120, 16
               

               
Conread position:
               
149-321
               

               
Cow position:
               
chr16:17292061-17291891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
149-407
               

               
Cow position:
               
chr16:22323858-22323591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
61, 129
               

               
Conread position:
               
150-372
               

               
Cow position:
               
chr16:49860194-49860418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
154-366
               

               
Cow position:
               
chr16:53451670-53451882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
155-375
               

               
Cow position:
               
chr16:31241325-31241105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
155-392
               

               
Cow position:
               
chr16:6609539-6609305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
9, 118
               

               
Conread position:
               
156-371
               

               
Cow position:
               
chr16:15945289-15945069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
158-336
               

               
Cow position:
               
chr16:19815276-19815104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
158-400
               

               
Cow position:
               
chr16:31575113-31575359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
103, 113
               

               
Conread position:
               
160-352
               

               
Cow position:
               
chr16:21370216-21370021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
138, 69
               

               
Conread position:
               
160-371
               

               
Cow position:
               
chr16:32893599-32893802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
160-375
               

               
Cow position:
               
chr16:46552764-46552980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 163
               

               
Conread position:
               
160-390
               

               
Cow position:
               
chr16:37401222-37401441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
44, 112
               

               
Conread position:
               
160-394
               

               
Cow position:
               
chr16:1582955-1582723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
148, 138
               

               
Conread position:
               
160-394
               

               
Cow position:
               
chr16:50442518-50442758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
7, 109
               

               
Conread position:
               
160-432
               

               
Cow position:
               
chr16:17460138-17460419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 260
               

               
Conread position:
               
160-436
               

               
Cow position:
               
chr16:9560524-9560235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
119, 128
               

               
Conread position:
               
161-321
               

               
Cow position:
               
chr16:33235189-33235032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
161-373
               

               
Cow position:
               
chr16:48613503-48613293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
161-388
               

               
Cow position:
               
chr16:32142062-32142292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 111
               

               
Conread position:
               
161-424
               

               
Cow position:
               
chr16:7723673-7723931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
215, 181
               

               
Conread position:
               
161-427
               

               
Cow position:
               
chr16:11359123-11359386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
234, 137
               

               
Conread position:
               
168-375
               

               
Cow position:
               
chr16:9958808-9959016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
170-384
               

               
Cow position:
               
chr16:7546845-7546640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
175-390
               

               
Cow position:
               
chr16:24142972-24142750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
115, 58
               

               
Conread position:
               
175-394
               

               
Cow position:
               
chr16:18573068-18572849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
133, 94
               

               
Conread position:
               
177-412
               

               
Cow position:
               
chr16:29636243-29636024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
181-378
               

               
Cow position:
               
chr16:7812682-7812883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 90
               

               
Conread position:
               
181-388
               

               
Cow position:
               
chr16:12324447-12324654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
86, 90
               

               
Conread position:
               
181-400
               

               
Cow position:
               
chr16:31484670-31484454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
181-407
               

               
Cow position:
               
chr16:56626929-56627149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
181-412
               

               
Cow position:
               
chr16:50286505-50286736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
116, 27
               

               
Conread position:
               
181-424
               

               
Cow position:
               
chr16:25484331-25484549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
183-375
               

               
Cow position:
               
chr16:34205070-34204878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
177, 171
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr16:14376776-14376998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
122, 46
               

               
Conread position:
               
183-406
               

               
Cow position:
               
chr16:16542844-16543070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
188-378
               

               
Cow position:
               
chr16:16025435-16025634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
188-406
               

               
Cow position:
               
chr16:45193810-45193591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
108, 150
               

               
Conread position:
               
188-408
               

               
Cow position:
               
chr16:7928386-7928162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
192-368
               

               
Cow position:
               
chr16:39385494-39385669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
193-386
               

               
Cow position:
               
chr16:19402758-19402567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
141, 98
               

               
Conread position:
               
193-392
               

               
Cow position:
               
chr16:9513298-9513497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
130, 108
               

               
Conread position:
               
193-422
               

               
Cow position:
               
chr16:19478761-19478535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
113, 165
               

               
Conread position:
               
195-434
               

               
Cow position:
               
chr16:22776416-22776171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
196-390
               

               
Cow position:
               
chr16:7912136-7912329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
110, 43
               

               
Conread position:
               
198-393
               

               
Cow position:
               
chr16:24674669-24674468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 74
               

               
Conread position:
               
198-399
               

               
Cow position:
               
chr16:29095930-29096129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 121
               

               
Conread position:
               
201-393
               

               
Cow position:
               
chr16:11003553-11003357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
105, 83
               

               
Conread position:
               
201-394
               

               
Cow position:
               
chr16:10249807-10249611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 75
               

               
Conread position:
               
204-374
               

               
Cow position:
               
chr16:45826703-45826535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
204-394
               

               
Cow position:
               
chr16:33290399-33290593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
206-410
               

               
Cow position:
               
chr16:21044313-21044521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
61, 70
               

               
Conread position:
               
208-404
               

               
Cow position:
               
chr16:4616664-4616469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
210-389
               

               
Cow position:
               
chr16:24672842-24672659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 62
               

               
Conread position:
               
215-378
               

               
Cow position:
               
chr16:51143825-51143989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
215-389
               

               
Cow position:
               
chr16:6026972-6026798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
215-393
               

               
Cow position:
               
chr16:50569289-50569465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
215-394
               

               
Cow position:
               
chr16:56615477-56615296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
215-400
               

               
Cow position:
               
chr16:55784726-55784533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
215-403
               

               
Cow position:
               
chr16:21442585-21442394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 53
               

               
Conread position:
               
215-404
               

               
Cow position:
               
chr16:38581028-38581220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 61
               

               
Conread position:
               
215-404
               

               
Cow position:
               
chr16:50943412-50943602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 68
               

               
Conread position:
               
215-407
               

               
Cow position:
               
chr16:336562-336366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
215-438
               

               
Cow position:
               
chr16:13796294-13796513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 142
               

               
Conread position:
               
216-406
               

               
Cow position:
               
chr16:8810067-8809879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
217-394
               

               
Cow position:
               
chr16:15252024-15251854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
219-389
               

               
Cow position:
               
chr16:23088875-23089042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
48, 34
               

               
Conread position:
               
219-390
               

               
Cow position:
               
chr16:49734115-49733943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 6
               

               
Conread position:
               
219-392
               

               
Cow position:
               
chr16:17617333-17617157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 52
               

               
Conread position:
               
219-394
               

               
Cow position:
               
chr16:15714139-15714318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
219-405
               

               
Cow position:
               
chr16:56126752-56126561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
219-407
               

               
Cow position:
               
chr16:34506381-34506567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
155, 82
               

               
Conread position:
               
219-424
               

               
Cow position:
               
chr16:52325569-52325361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 52
               

               
Conread position:
               
219-436
               

               
Cow position:
               
chr16:30646542-30646757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
220-395
               

               
Cow position:
               
chr16:41696039-41696213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
220-427
               

               
Cow position:
               
chr16:17746068-17746273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
180, 54
               

               
Conread position:
               
221-425
               

               
Cow position:
               
chr16:31011359-31011567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
225-371
               

               
Cow position:
               
chr16:3938975-3938829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
225-404
               

               
Cow position:
               
chr16:11775958-11775781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
225-405
               

               
Cow position:
               
chr16:5396781-5396598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
226-404
               

               
Cow position:
               
chr16:29311560-29311742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 46
               

               
Conread position:
               
227-385
               

               
Cow position:
               
chr16:46184195-46184358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
230-372
               

               
Cow position:
               
chr16:48130354-48130212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 78
               

               
Conread position:
               
230-394
               

               
Cow position:
               
chr16:23515725-23515560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
230-407
               

               
Cow position:
               
chr16:12111925-12111751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
232-408
               

               
Cow position:
               
chr16:51393348-51393167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
234-438
               

               
Cow position:
               
chr16:11467645-11467851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
235-437
               

               
Cow position:
               
chr16:27117350-27117555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
26, 155
               

               
Conread position:
               
237-372
               

               
Cow position:
               
chr16:23881163-23881029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
248-400
               

               
Cow position:
               
chr16:23033886-23034041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               
Show alignments to all cow chromosomes.