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Cow genome map

           
Conread name:
           
Bra1-PBL_19_B02
        

               
Conread position:
               
84-404
               

               
Cow position:
               
chr6:7627898-7628224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
107, 71
               

               
Conread position:
               
86-407
               

               
Cow position:
               
chr6:22850310-22849994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
175, 28
               

               
Conread position:
               
88-324
               

               
Cow position:
               
chr6:37462958-37463198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
66, 94
               

               
Conread position:
               
88-408
               

               
Cow position:
               
chr6:60274072-60273749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
89-349
               

               
Cow position:
               
chr6:6060626-6060370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
208, 50
               

               
Conread position:
               
89-371
               

               
Cow position:
               
chr6:17794818-17794533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
220, 16
               

               
Conread position:
               
89-375
               

               
Cow position:
               
chr6:46860227-46859944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
89-392
               

               
Cow position:
               
chr6:15242773-15243083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
89-394
               

               
Cow position:
               
chr6:53841562-53841258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
209, 68
               

               
Conread position:
               
89-428
               

               
Cow position:
               
chr6:9736707-9736368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
92-326
               

               
Cow position:
               
chr6:582328-582099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
92-368
               

               
Cow position:
               
chr6:9718976-9718698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
65, 105
               

               
Conread position:
               
92-384
               

               
Cow position:
               
chr6:32268932-32268652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
205, 50
               

               
Conread position:
               
92-393
               

               
Cow position:
               
chr6:4468712-4469010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
202, 72
               

               
Conread position:
               
92-413
               

               
Cow position:
               
chr6:59718740-59719077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
94-321
               

               
Cow position:
               
chr6:35993532-35993754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
94-349
               

               
Cow position:
               
chr6:37149134-37149386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
94-361
               

               
Cow position:
               
chr6:68652407-68652137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
94-371
               

               
Cow position:
               
chr6:54867460-54867737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 254
               

               
Conread position:
               
94-372
               

               
Cow position:
               
chr6:12092047-12091763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 72
               

               
Conread position:
               
94-378
               

               
Cow position:
               
chr6:39093682-39093974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
59, 191
               

               
Conread position:
               
94-384
               

               
Cow position:
               
chr6:66131252-66131554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
94-391
               

               
Cow position:
               
chr6:37395462-37395161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 209
               

               
Conread position:
               
94-394
               

               
Cow position:
               
chr6:5845226-5844923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
179, 58
               

               
Conread position:
               
94-400
               

               
Cow position:
               
chr6:58370700-58370999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 142
               

               
Conread position:
               
94-402
               

               
Cow position:
               
chr6:44566363-44566679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
54, 87
               

               
Conread position:
               
94-406
               

               
Cow position:
               
chr6:23402044-23401738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
282, 66
               

               
Conread position:
               
94-406
               

               
Cow position:
               
chr6:33509736-33510048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 68
               

               
Conread position:
               
94-425
               

               
Cow position:
               
chr6:15937905-15937577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
203, 40
               

               
Conread position:
               
94-438
               

               
Cow position:
               
chr6:60739962-60740299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
282, 63
               

               
Conread position:
               
95-303
               

               
Cow position:
               
chr6:66375383-66375180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
95-351
               

               
Cow position:
               
chr6:47799237-47799495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
95-390
               

               
Cow position:
               
chr6:7190172-7189888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
61, 79
               

               
Conread position:
               
95-390
               

               
Cow position:
               
chr6:65870977-65871271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
70, 161
               

               
Conread position:
               
95-402
               

               
Cow position:
               
chr6:46283063-46282738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
96-375
               

               
Cow position:
               
chr6:12337939-12338216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
96-388
               

               
Cow position:
               
chr6:17068698-17068416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
100-391
               

               
Cow position:
               
chr6:57546268-57545987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
198, 43
               

               
Conread position:
               
100-394
               

               
Cow position:
               
chr6:53460620-53460326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
51, 200
               

               
Conread position:
               
100-430
               

               
Cow position:
               
chr6:57571430-57571757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
249, 63
               

               
Conread position:
               
101-329
               

               
Cow position:
               
chr6:60516778-60517006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
105-406
               

               
Cow position:
               
chr6:26155110-26155404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
193, 22
               

               
Conread position:
               
106-305
               

               
Cow position:
               
chr6:9452815-9452614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
107-263
               

               
Cow position:
               
chr6:61608470-61608625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
107-289
               

               
Cow position:
               
chr6:20098005-20097820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
107-352
               

               
Cow position:
               
chr6:61269269-61269514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
107-375
               

               
Cow position:
               
chr6:60118109-60118368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
107-388
               

               
Cow position:
               
chr6:24339242-24339528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
131, 27
               

               
Conread position:
               
107-390
               

               
Cow position:
               
chr6:8966050-8966330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
47, 86
               

               
Conread position:
               
107-394
               

               
Cow position:
               
chr6:55417568-55417288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 50
               

               
Conread position:
               
107-400
               

               
Cow position:
               
chr6:16288093-16287815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
270, 46
               

               
Conread position:
               
107-404
               

               
Cow position:
               
chr6:17997355-17997063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
189, 16
               

               
Conread position:
               
109-333
               

               
Cow position:
               
chr6:48112159-48112380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
197, 48
               

               
Conread position:
               
109-394
               

               
Cow position:
               
chr6:55282326-55282047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
109-401
               

               
Cow position:
               
chr6:23466068-23465784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
197, 42
               

               
Conread position:
               
110-400
               

               
Cow position:
               
chr6:50577487-50577766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
111-248
               

               
Cow position:
               
chr6:67615468-67615332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
111-296
               

               
Cow position:
               
chr6:47640470-47640287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 56
               

               
Conread position:
               
112-246
               

               
Cow position:
               
chr6:1944676-1944809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 98
               

               
Conread position:
               
112-248
               

               
Cow position:
               
chr6:36493585-36493443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 130
               

               
Conread position:
               
112-271
               

               
Cow position:
               
chr6:32517136-32516988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
112-300
               

               
Cow position:
               
chr6:899326-899146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
112-306
               

               
Cow position:
               
chr6:28977080-28976883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
112-306
               

               
Cow position:
               
chr6:50976014-50976204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
112-313
               

               
Cow position:
               
chr6:53652006-53652203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
112-315
               

               
Cow position:
               
chr6:1422449-1422651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
112-317
               

               
Cow position:
               
chr6:54991039-54990834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
112-321
               

               
Cow position:
               
chr6:16423664-16423871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
112-328
               

               
Cow position:
               
chr6:36652383-36652599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
112-350
               

               
Cow position:
               
chr6:8637239-8637478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 193
               

               
Conread position:
               
112-355
               

               
Cow position:
               
chr6:18955101-18954881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
112-358
               

               
Cow position:
               
chr6:31078908-31078660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
112-359
               

               
Cow position:
               
chr6:26915294-26915538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
112-359
               

               
Cow position:
               
chr6:61168733-61168975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
194, 27
               

               
Conread position:
               
112-365
               

               
Cow position:
               
chr6:8125289-8125545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
184, 52
               

               
Conread position:
               
112-365
               

               
Cow position:
               
chr6:38641458-38641710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 113
               

               
Conread position:
               
112-368
               

               
Cow position:
               
chr6:35842619-35842879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 82
               

               
Conread position:
               
112-372
               

               
Cow position:
               
chr6:4383450-4383697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
112-372
               

               
Cow position:
               
chr6:22985894-22985639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 170
               

               
Conread position:
               
112-372
               

               
Cow position:
               
chr6:36196176-36196425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
188, 52
               

               
Conread position:
               
112-372
               

               
Cow position:
               
chr6:54365366-54365106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-375
               

               
Cow position:
               
chr6:21231489-21231738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
112-375
               

               
Cow position:
               
chr6:38207527-38207260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
112-375
               

               
Cow position:
               
chr6:38853691-38853430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
186, 41
               

               
Conread position:
               
112-375
               

               
Cow position:
               
chr6:41375734-41375996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
177, 116
               

               
Conread position:
               
112-375
               

               
Cow position:
               
chr6:67950916-67951183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 104
               

               
Conread position:
               
112-375
               

               
Cow position:
               
chr6:68816130-68816396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
186, 72
               

               
Conread position:
               
112-387
               

               
Cow position:
               
chr6:5609482-5609204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
188, 59
               

               
Conread position:
               
112-387
               

               
Cow position:
               
chr6:46465787-46466055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
112-388
               

               
Cow position:
               
chr6:7128442-7128165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
50, 71
               

               
Conread position:
               
112-388
               

               
Cow position:
               
chr6:32287602-32287870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
112-390
               

               
Cow position:
               
chr6:56849976-56850258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 188
               

               
Conread position:
               
112-391
               

               
Cow position:
               
chr6:18118088-18117806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 114
               

               
Conread position:
               
112-392
               

               
Cow position:
               
chr6:1770234-1769951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
161, 48
               

               
Conread position:
               
112-392
               

               
Cow position:
               
chr6:20157295-20157578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
43, 55
               

               
Conread position:
               
112-394
               

               
Cow position:
               
chr6:16266686-16266974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
112-394
               

               
Cow position:
               
chr6:24536578-24536281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 88
               

               
Conread position:
               
112-394
               

               
Cow position:
               
chr6:54208173-54207887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 49
               

               
Conread position:
               
112-395
               

               
Cow position:
               
chr6:10399940-10399662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
182, 33
               

               
Conread position:
               
112-396
               

               
Cow position:
               
chr6:120209-120483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
112-396
               

               
Cow position:
               
chr6:44078481-44078761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
186, 52
               

               
Conread position:
               
112-396
               

               
Cow position:
               
chr6:66570401-66570671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
44, 173
               

               
Conread position:
               
112-402
               

               
Cow position:
               
chr6:51581289-51581001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
112-403
               

               
Cow position:
               
chr6:29210461-29210729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
39, 49
               

               
Conread position:
               
112-403
               

               
Cow position:
               
chr6:60144235-60143945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 45
               

               
Conread position:
               
112-403
               

               
Cow position:
               
chr6:60468201-60468485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
167, 53
               

               
Conread position:
               
112-404
               

               
Cow position:
               
chr6:11192503-11192225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
49, 133
               

               
Conread position:
               
112-404
               

               
Cow position:
               
chr6:23695958-23696248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
59, 202
               

               
Conread position:
               
112-404
               

               
Cow position:
               
chr6:24468427-24468146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
112-404
               

               
Cow position:
               
chr6:41244935-41244656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 48
               

               
Conread position:
               
112-404
               

               
Cow position:
               
chr6:52478450-52478155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
112-405
               

               
Cow position:
               
chr6:11246727-11247026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
112-406
               

               
Cow position:
               
chr6:2078856-2078560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 277
               

               
Conread position:
               
112-406
               

               
Cow position:
               
chr6:3350983-3351286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 227
               

               
Conread position:
               
112-407
               

               
Cow position:
               
chr6:13565048-13565343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
112-408
               

               
Cow position:
               
chr6:47574870-47575150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
112-409
               

               
Cow position:
               
chr6:13687849-13687553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
112-416
               

               
Cow position:
               
chr6:17414485-17414183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
105, 224
               

               
Conread position:
               
112-434
               

               
Cow position:
               
chr6:64431899-64432225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
12, 16
               

               
Conread position:
               
112-438
               

               
Cow position:
               
chr6:10176332-10176004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
209, 43
               

               
Conread position:
               
113-275
               

               
Cow position:
               
chr6:23248000-23247841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 87
               

               
Conread position:
               
113-302
               

               
Cow position:
               
chr6:59770192-59770375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
113-306
               

               
Cow position:
               
chr6:12551233-12551426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
174, 106
               

               
Conread position:
               
113-321
               

               
Cow position:
               
chr6:7130925-7130709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
113-321
               

               
Cow position:
               
chr6:8209634-8209433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
185, 30
               

               
Conread position:
               
113-359
               

               
Cow position:
               
chr6:2547210-2547465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
113-360
               

               
Cow position:
               
chr6:67643726-67643478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
201, 38
               

               
Conread position:
               
113-372
               

               
Cow position:
               
chr6:32867248-32866998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
110, 11
               

               
Conread position:
               
113-375
               

               
Cow position:
               
chr6:49398649-49398403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
113-375
               

               
Cow position:
               
chr6:54132776-54133037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
63, 43
               

               
Conread position:
               
113-377
               

               
Cow position:
               
chr6:34119390-34119135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
113-386
               

               
Cow position:
               
chr6:9302750-9302486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
113-390
               

               
Cow position:
               
chr6:32126027-32126293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
113-393
               

               
Cow position:
               
chr6:31535606-31535329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
179, 164
               

               
Conread position:
               
113-394
               

               
Cow position:
               
chr6:27240041-27239758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
154, 40
               

               
Conread position:
               
113-394
               

               
Cow position:
               
chr6:43345478-43345195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
94, 47
               

               
Conread position:
               
113-395
               

               
Cow position:
               
chr6:21456723-21456431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
113-398
               

               
Cow position:
               
chr6:54490770-54490497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 43
               

               
Conread position:
               
113-400
               

               
Cow position:
               
chr6:23353518-23353807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
152, 41
               

               
Conread position:
               
113-400
               

               
Cow position:
               
chr6:35435957-35436238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 43
               

               
Conread position:
               
113-400
               

               
Cow position:
               
chr6:36202785-36203072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
113-404
               

               
Cow position:
               
chr6:68376360-68376061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
43, 119
               

               
Conread position:
               
113-406
               

               
Cow position:
               
chr6:27888315-27888602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
113-410
               

               
Cow position:
               
chr6:38640196-38640492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
211, 243
               

               
Conread position:
               
113-420
               

               
Cow position:
               
chr6:19264531-19264228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 39
               

               
Conread position:
               
113-434
               

               
Cow position:
               
chr6:62929460-62929782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
94, 34
               

               
Conread position:
               
113-437
               

               
Cow position:
               
chr6:25615139-25614801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
114-242
               

               
Cow position:
               
chr6:24962108-24962237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
114-303
               

               
Cow position:
               
chr6:58590235-58590426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
114-329
               

               
Cow position:
               
chr6:21869685-21869468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
114-371
               

               
Cow position:
               
chr6:67617987-67617725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
114-372
               

               
Cow position:
               
chr6:63720161-63720415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 190
               

               
Conread position:
               
114-394
               

               
Cow position:
               
chr6:6195145-6194857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 50
               

               
Conread position:
               
114-406
               

               
Cow position:
               
chr6:59603245-59602957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
68, 184
               

               
Conread position:
               
114-438
               

               
Cow position:
               
chr6:23025147-23024808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
115-296
               

               
Cow position:
               
chr6:32853153-32853333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
115-350
               

               
Cow position:
               
chr6:2153631-2153395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
152, 41
               

               
Conread position:
               
115-372
               

               
Cow position:
               
chr6:45690636-45690395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
115-375
               

               
Cow position:
               
chr6:60266215-60265942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
181, 49
               

               
Conread position:
               
115-394
               

               
Cow position:
               
chr6:15300859-15300595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
115-394
               

               
Cow position:
               
chr6:21399791-21399509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
167, 234
               

               
Conread position:
               
115-394
               

               
Cow position:
               
chr6:63251954-63251676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
199, 32
               

               
Conread position:
               
115-404
               

               
Cow position:
               
chr6:46558021-46558309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
115-407
               

               
Cow position:
               
chr6:8094324-8094026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
115-421
               

               
Cow position:
               
chr6:14914274-14913960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
116-263
               

               
Cow position:
               
chr6:15022580-15022434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 51
               

               
Conread position:
               
116-279
               

               
Cow position:
               
chr6:130195-130035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
116-368
               

               
Cow position:
               
chr6:35990267-35990020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 44
               

               
Conread position:
               
116-393
               

               
Cow position:
               
chr6:29485054-29485327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
113, 37
               

               
Conread position:
               
116-394
               

               
Cow position:
               
chr6:15447235-15446947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
46, 72
               

               
Conread position:
               
116-401
               

               
Cow position:
               
chr6:143403-143126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
116-403
               

               
Cow position:
               
chr6:16103228-16102936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
165, 50
               

               
Conread position:
               
116-431
               

               
Cow position:
               
chr6:26728558-26728264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
117-404
               

               
Cow position:
               
chr6:50090609-50090900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
120-263
               

               
Cow position:
               
chr6:12197149-12197293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
120-285
               

               
Cow position:
               
chr6:54083019-54082854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
120-294
               

               
Cow position:
               
chr6:35613452-35613273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
120-306
               

               
Cow position:
               
chr6:19259373-19259186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
120-328
               

               
Cow position:
               
chr6:60350323-60350112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
120-365
               

               
Cow position:
               
chr6:36921003-36920759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
182, 18
               

               
Conread position:
               
120-372
               

               
Cow position:
               
chr6:15305547-15305794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
188, 44
               

               
Conread position:
               
120-375
               

               
Cow position:
               
chr6:10106009-10105757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 0
               

               
Conread position:
               
120-375
               

               
Cow position:
               
chr6:44194576-44194330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
120-375
               

               
Cow position:
               
chr6:49437304-49437557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
175, 38
               

               
Conread position:
               
120-390
               

               
Cow position:
               
chr6:47355790-47356067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 136
               

               
Conread position:
               
120-393
               

               
Cow position:
               
chr6:49421817-49421552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 47
               

               
Conread position:
               
120-399
               

               
Cow position:
               
chr6:39358376-39358093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
29, 193
               

               
Conread position:
               
120-406
               

               
Cow position:
               
chr6:47520022-47520312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
120-422
               

               
Cow position:
               
chr6:67451674-67451393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
120-425
               

               
Cow position:
               
chr6:69334340-69334040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
126, 109
               

               
Conread position:
               
120-431
               

               
Cow position:
               
chr6:694179-693865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
139, 38
               

               
Conread position:
               
120-436
               

               
Cow position:
               
chr6:47305308-47305629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
122-263
               

               
Cow position:
               
chr6:56843128-56843267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
122-322
               

               
Cow position:
               
chr6:6400925-6401122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 108
               

               
Conread position:
               
122-372
               

               
Cow position:
               
chr6:38609943-38610197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
139, 36
               

               
Conread position:
               
122-389
               

               
Cow position:
               
chr6:41015003-41014734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
198, 36
               

               
Conread position:
               
122-405
               

               
Cow position:
               
chr6:63065798-63066091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
122-405
               

               
Cow position:
               
chr6:67451399-67451117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
176, 239
               

               
Conread position:
               
122-406
               

               
Cow position:
               
chr6:6063316-6063036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
145, 31
               

               
Conread position:
               
122-407
               

               
Cow position:
               
chr6:15243228-15243518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
217, 38
               

               
Conread position:
               
122-413
               

               
Cow position:
               
chr6:62669842-62670134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
156, 23
               

               
Conread position:
               
122-429
               

               
Cow position:
               
chr6:53145709-53145403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
122-433
               

               
Cow position:
               
chr6:8562694-8562996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
164, 111
               

               
Conread position:
               
123-321
               

               
Cow position:
               
chr6:51463658-51463467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
123-322
               

               
Cow position:
               
chr6:37332080-37332281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
123-352
               

               
Cow position:
               
chr6:61524232-61524001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
194, 0
               

               
Conread position:
               
123-375
               

               
Cow position:
               
chr6:5114072-5113821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
170, 37
               

               
Conread position:
               
123-388
               

               
Cow position:
               
chr6:62056587-62056850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
123-395
               

               
Cow position:
               
chr6:6965423-6965149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
176, 47
               

               
Conread position:
               
123-396
               

               
Cow position:
               
chr6:68685529-68685787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
123-400
               

               
Cow position:
               
chr6:48097627-48097354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
123-403
               

               
Cow position:
               
chr6:12964827-12965107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
156, 43
               

               
Conread position:
               
123-404
               

               
Cow position:
               
chr6:32121880-32122152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
254, 160
               

               
Conread position:
               
123-405
               

               
Cow position:
               
chr6:59798629-59798904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
124-295
               

               
Cow position:
               
chr6:38218645-38218811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
124-388
               

               
Cow position:
               
chr6:50504429-50504695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
124-395
               

               
Cow position:
               
chr6:53024830-53024565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
124-406
               

               
Cow position:
               
chr6:47540871-47540584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
125-375
               

               
Cow position:
               
chr6:24031349-24031589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 109
               

               
Conread position:
               
125-388
               

               
Cow position:
               
chr6:30023870-30024116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
157, 22
               

               
Conread position:
               
125-394
               

               
Cow position:
               
chr6:35319155-35318888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
126-329
               

               
Cow position:
               
chr6:58597531-58597327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
29, 177
               

               
Conread position:
               
127-312
               

               
Cow position:
               
chr6:53089986-53090172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
170, 164
               

               
Conread position:
               
127-386
               

               
Cow position:
               
chr6:5330389-5330651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
127-428
               

               
Cow position:
               
chr6:21293518-21293219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 39
               

               
Conread position:
               
129-400
               

               
Cow position:
               
chr6:53546016-53546281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
248, 23
               

               
Conread position:
               
131-381
               

               
Cow position:
               
chr6:4702842-4702588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
131-387
               

               
Cow position:
               
chr6:58725358-58725605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
137-395
               

               
Cow position:
               
chr6:13367272-13367528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
137-427
               

               
Cow position:
               
chr6:32453375-32453668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
121, 17
               

               
Conread position:
               
138-406
               

               
Cow position:
               
chr6:66978857-66979128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
129, 91
               

               
Conread position:
               
139-289
               

               
Cow position:
               
chr6:20929524-20929375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
140-394
               

               
Cow position:
               
chr6:1475335-1475582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
143-378
               

               
Cow position:
               
chr6:48379621-48379382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
144-316
               

               
Cow position:
               
chr6:1002267-1002097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
152, 15
               

               
Conread position:
               
144-429
               

               
Cow position:
               
chr6:57320588-57320318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
144-433
               

               
Cow position:
               
chr6:62683362-62683657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
145-372
               

               
Cow position:
               
chr6:6168686-6168910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
145-391
               

               
Cow position:
               
chr6:21475721-21475967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 140
               

               
Conread position:
               
145-398
               

               
Cow position:
               
chr6:55297101-55296843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
146-404
               

               
Cow position:
               
chr6:35727840-35728103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
147-358
               

               
Cow position:
               
chr6:67069818-67069603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
103, 46
               

               
Conread position:
               
149-393
               

               
Cow position:
               
chr6:36809212-36808958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
149-428
               

               
Cow position:
               
chr6:12928146-12928417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
150-400
               

               
Cow position:
               
chr6:42034770-42035021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
12, 89
               

               
Conread position:
               
150-404
               

               
Cow position:
               
chr6:58459720-58459968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
14, 128
               

               
Conread position:
               
150-431
               

               
Cow position:
               
chr6:21470427-21470151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
152-394
               

               
Cow position:
               
chr6:18447512-18447269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 14
               

               
Conread position:
               
152-419
               

               
Cow position:
               
chr6:54831478-54831748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
153-391
               

               
Cow position:
               
chr6:66839201-66839435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
153-399
               

               
Cow position:
               
chr6:21535040-21535290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
153-425
               

               
Cow position:
               
chr6:29775627-29775896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
141, 13
               

               
Conread position:
               
154-386
               

               
Cow position:
               
chr6:61109791-61110019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
154-387
               

               
Cow position:
               
chr6:57079428-57079664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
156, 10
               

               
Conread position:
               
157-388
               

               
Cow position:
               
chr6:1941823-1941595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
160-322
               

               
Cow position:
               
chr6:61569642-61569800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
160-394
               

               
Cow position:
               
chr6:54127803-54127576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
160-406
               

               
Cow position:
               
chr6:55404916-55405170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 226
               

               
Conread position:
               
161-400
               

               
Cow position:
               
chr6:60850712-60850947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
137, 20
               

               
Conread position:
               
165-391
               

               
Cow position:
               
chr6:1866747-1866973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
180, 25
               

               
Conread position:
               
166-296
               

               
Cow position:
               
chr6:43651768-43651898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
166-372
               

               
Cow position:
               
chr6:12623531-12623732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
166-374
               

               
Cow position:
               
chr6:1871182-1870972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
181-321
               

               
Cow position:
               
chr6:54349725-54349864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
181-390
               

               
Cow position:
               
chr6:23938091-23938292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
181-404
               

               
Cow position:
               
chr6:16090934-16091152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
183-372
               

               
Cow position:
               
chr6:12761312-12761503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
115, 68
               

               
Conread position:
               
183-390
               

               
Cow position:
               
chr6:51933587-51933780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
183-394
               

               
Cow position:
               
chr6:21184190-21183978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
113, 77
               

               
Conread position:
               
183-403
               

               
Cow position:
               
chr6:5601735-5601958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
115, 45
               

               
Conread position:
               
188-387
               

               
Cow position:
               
chr6:36537323-36537125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
188-396
               

               
Cow position:
               
chr6:3936822-3937035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
110, 29
               

               
Conread position:
               
189-406
               

               
Cow position:
               
chr6:411175-410962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
181, 20
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr6:41657307-41657521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
201, 126
               

               
Conread position:
               
193-329
               

               
Cow position:
               
chr6:28900369-28900505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
195-394
               

               
Cow position:
               
chr6:53346019-53346211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
195-403
               

               
Cow position:
               
chr6:15058421-15058628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
195-436
               

               
Cow position:
               
chr6:21350988-21350743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
101, 56
               

               
Conread position:
               
197-372
               

               
Cow position:
               
chr6:24905674-24905845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
198-376
               

               
Cow position:
               
chr6:40682615-40682441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
198-400
               

               
Cow position:
               
chr6:42483463-42483669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
83, 22
               

               
Conread position:
               
198-404
               

               
Cow position:
               
chr6:35726142-35726344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 74
               

               
Conread position:
               
204-368
               

               
Cow position:
               
chr6:60186609-60186435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
210-412
               

               
Cow position:
               
chr6:49685878-49686084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
212-375
               

               
Cow position:
               
chr6:54406742-54406577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
212-405
               

               
Cow position:
               
chr6:35342120-35341932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
214-386
               

               
Cow position:
               
chr6:38032920-38033095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
214-404
               

               
Cow position:
               
chr6:58173413-58173597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
215-375
               

               
Cow position:
               
chr6:53711467-53711629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
215-400
               

               
Cow position:
               
chr6:28562104-28561917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
95, 69
               

               
Conread position:
               
215-404
               

               
Cow position:
               
chr6:18776315-18776502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 47
               

               
Conread position:
               
215-404
               

               
Cow position:
               
chr6:37994273-37994457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
216-375
               

               
Cow position:
               
chr6:32006389-32006230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
216-394
               

               
Cow position:
               
chr6:34463522-34463345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
167, 101
               

               
Conread position:
               
216-400
               

               
Cow position:
               
chr6:21004742-21004931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
216-404
               

               
Cow position:
               
chr6:19936504-19936313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
216-427
               

               
Cow position:
               
chr6:14383741-14383954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
216-435
               

               
Cow position:
               
chr6:34423393-34423173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chr6:57962332-57962111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 139
               

               
Conread position:
               
218-394
               

               
Cow position:
               
chr6:43540182-43540017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
219-389
               

               
Cow position:
               
chr6:55919866-55919692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
219-404
               

               
Cow position:
               
chr6:47150888-47151074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
220-372
               

               
Cow position:
               
chr6:63182358-63182508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
224-372
               

               
Cow position:
               
chr6:2014202-2014348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
225-375
               

               
Cow position:
               
chr6:4699782-4699931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
225-375
               

               
Cow position:
               
chr6:8726752-8726903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
226-405
               

               
Cow position:
               
chr6:62805718-62805900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 161
               

               
Conread position:
               
229-389
               

               
Cow position:
               
chr6:57935492-57935336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
230-375
               

               
Cow position:
               
chr6:2757864-2758008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
230-394
               

               
Cow position:
               
chr6:7291395-7291556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
230-396
               

               
Cow position:
               
chr6:63168687-63168516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
236-414
               

               
Cow position:
               
chr6:12099601-12099424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
237-366
               

               
Cow position:
               
chr6:53235566-53235436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               
Show alignments to all cow chromosomes.