Cow genome map

Conread name: Bra1-olf_071_B12

Conread position: 1-195
Cow position: chr15:16908406-16908603 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 38

Conread position: 1-252
Cow position: chr15:17337335-17337587 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 118, 41

Conread position: 1-252
Cow position: chr15:36353641-36353897 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 98, 38

Conread position: 1-254
Cow position: chr15:9107005-9107267 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-259
Cow position: chr15:24982206-24981957 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 105, 38

Conread position: 1-270
Cow position: chr15:34896736-34897010 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 118, 24

Conread position: 1-276
Cow position: chr15:29330979-29331257 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 112, 41

Conread position: 1-307
Cow position: chr15:16822912-16823216 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 38

Conread position: 1-319
Cow position: chr15:27900537-27900211 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 97, 38

Conread position: 1-322
Cow position: chr15:16603798-16604117 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 207
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 41

Conread position: 1-322
Cow position: chr15:29810096-29810404 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 15

Conread position: 1-322
Cow position: chr15:32287767-32287463 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 32

Conread position: 2-182
Cow position: chr15:26718946-26718762 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 117, 37

Conread position: 2-255
Cow position: chr15:13554327-13554586 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 115, 40

Conread position: 2-285
Cow position: chr15:8354015-8354305 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 37

Conread position: 2-307
Cow position: chr15:17233165-17233474 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 29, 39

Conread position: 2-317
Cow position: chr15:33643063-33643376 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 16

Conread position: 2-319
Cow position: chr15:24031172-24031472 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 215
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 142

Conread position: 2-322
Cow position: chr15:20391303-20390983 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 42

Conread position: 2-322
Cow position: chr15:29604727-29604422 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 228
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 15, 38

Conread position: 2-364
Cow position: chr15:24994539-24994183 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 34

Conread position: 3-181
Cow position: chr15:37284428-37284613 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 116, 36

Conread position: 3-239
Cow position: chr15:51307706-51307464 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 114, 34

Conread position: 3-252
Cow position: chr15:53716408-53716661 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 37

Conread position: 3-272
Cow position: chr15:5726300-5726573 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 112, 39

Conread position: 3-307
Cow position: chr15:244756-245054 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 206
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 116, 36

Conread position: 3-318
Cow position: chr15:24967769-24968083 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 110, 36

Conread position: 3-319
Cow position: chr15:1297714-1298029 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 114, 39

Conread position: 3-322
Cow position: chr15:3700312-3699987 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 36

Conread position: 3-322
Cow position: chr15:16307394-16307711 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 3-322
Cow position: chr15:21420914-21421237 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 100, 29

Conread position: 3-322
Cow position: chr15:27973241-27972920 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 222
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 115, 15

Conread position: 4-177
Cow position: chr15:44237393-44237572 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 115, 35

Conread position: 4-243
Cow position: chr15:30470996-30470750 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 115, 35

Conread position: 4-298
Cow position: chr15:23275518-23275809 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 35

Conread position: 4-319
Cow position: chr15:46868738-46868421 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 115, 35

Conread position: 4-319
Cow position: chr15:52454404-52454737 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 220
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 14, 38

Conread position: 4-322
Cow position: chr15:6969967-6970281 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 230
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 115, 12

Conread position: 4-327
Cow position: chr15:36259630-36259302 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 42

Conread position: 5-242
Cow position: chr15:662491-662250 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 37

Conread position: 5-314
Cow position: chr15:42789171-42788863 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 37

Conread position: 5-322
Cow position: chr15:20351809-20352129 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 37

Conread position: 5-322
Cow position: chr15:33306087-33306403 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 34

Conread position: 5-322
Cow position: chr15:46563507-46563189 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 221
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 277, 34

Conread position: 6-314
Cow position: chr15:44658339-44658647 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 103, 27

Conread position: 6-318
Cow position: chr15:36435181-36435501 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 8, 16

Conread position: 6-319
Cow position: chr15:26573358-26573679 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 111, 26

Conread position: 7-199
Cow position: chr15:39090273-39090469 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 34

Conread position: 7-280
Cow position: chr15:26404262-26404531 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 111, 32

Conread position: 7-284
Cow position: chr15:36887815-36888084 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 33

Conread position: 7-322
Cow position: chr15:17196125-17196440 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 209
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 148

Conread position: 7-322
Cow position: chr15:49257841-49258172 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 16

Conread position: 11-229
Cow position: chr15:35425826-35425607 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 28

Conread position: 11-319
Cow position: chr15:17870301-17870003 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 23

Conread position: 11-319
Cow position: chr15:25208774-25208473 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 28

Conread position: 18-272
Cow position: chr15:26117514-26117754 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 193
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 101, 21

Conread position: 18-279
Cow position: chr15:6905067-6905317 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 10, 16

Conread position: 18-321
Cow position: chr15:30316577-30316295 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 99, 18

Conread position: 18-322
Cow position: chr15:12304628-12304936 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 21

Conread position: 18-322
Cow position: chr15:14870733-14871041 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 21

Conread position: 18-332
Cow position: chr15:41125583-41125262 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 21

Conread position: 20-269
Cow position: chr15:3726116-3726364 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 99, 19

Conread position: 22-318
Cow position: chr15:4093939-4093633 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 22

Conread position: 24-322
Cow position: chr15:23568131-23567831 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 93, 15

Conread position: 25-181
Cow position: chr15:4694740-4694903 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 94, 14

Conread position: 29-322
Cow position: chr15:225803-225508 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 88, 10

Conread position: 31-326
Cow position: chr15:18720317-18720613 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 76, 8

Conread position: 32-322
Cow position: chr15:5234993-5234709 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 103, 10

Conread position: 33-322
Cow position: chr15:26896689-26896416 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 6, 0

Conread position: 35-230
Cow position: chr15:34284404-34284205 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 7

Conread position: 35-322
Cow position: chr15:11658566-11658270 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 14

Conread position: 38-274
Cow position: chr15:12655907-12655661 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 81, 159

Conread position: 38-312
Cow position: chr15:47843242-47842973 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 79, 141

Conread position: 38-314
Cow position: chr15:13515375-13515659 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 38-318
Cow position: chr15:20390702-20390407 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 79, 52

Conread position: 41-351
Cow position: chr15:51898240-51898556 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 76, 215

Conread position: 43-257
Cow position: chr15:43599203-43599418 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 147

Conread position: 43-274
Cow position: chr15:10608292-10608055 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 43-279
Cow position: chr15:18671442-18671192 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 76, 0

Conread position: 43-282
Cow position: chr15:34139995-34140236 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 161
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 59, 106

Conread position: 43-284
Cow position: chr15:363039-363285 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 43-284
Cow position: chr15:23114848-23115101 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 241

Conread position: 43-303
Cow position: chr15:5443998-5444259 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 84

Conread position: 43-312
Cow position: chr15:20472534-20472260 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 69, 155

Conread position: 43-312
Cow position: chr15:43914081-43913798 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 64, 0

Conread position: 43-319
Cow position: chr15:20370441-20370171 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 65, 131

Conread position: 43-319
Cow position: chr15:38806488-38806203 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 41, 76

Conread position: 43-322
Cow position: chr15:16583678-16583416 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 73, 58

Conread position: 43-322
Cow position: chr15:21893793-21894077 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 42

Conread position: 43-322
Cow position: chr15:33284891-33285177 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 66, 76

Conread position: 43-322
Cow position: chr15:50322608-50322890 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 74, 229

Conread position: 44-322
Cow position: chr15:20487188-20486922 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 73, 143

Conread position: 45-200
Cow position: chr15:18647396-18647554 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 73, 32

Conread position: 45-307
Cow position: chr15:7535639-7535388 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 177, 95

Conread position: 45-319
Cow position: chr15:7192246-7191969 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 144

Conread position: 48-311
Cow position: chr15:41360931-41360678 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 71, 121

Conread position: 49-273
Cow position: chr15:35112863-35112628 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 49-318
Cow position: chr15:20534430-20534159 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 134

Conread position: 49-322
Cow position: chr15:16112420-16112700 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 68, 0

Conread position: 50-280
Cow position: chr15:16543426-16543202 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 67, 93

Conread position: 52-322
Cow position: chr15:15880949-15881230 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 60, 0

Conread position: 65-305
Cow position: chr15:38877268-38877025 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 125

Conread position: 77-309
Cow position: chr15:38103837-38103608 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 75

Show alignments to all cow chromosomes.