Cow genome map

Conread name: Bra1-olf_071_B12

Conread position: 1-136
Cow position: chr24:22133263-22133128 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 118, 38

Conread position: 1-194
Cow position: chr24:13948213-13948014 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 39

Conread position: 1-204
Cow position: chr24:37974889-37975097 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 38

Conread position: 1-214
Cow position: chr24:39523357-39523573 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 116, 41

Conread position: 1-225
Cow position: chr24:27713313-27713541 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 38

Conread position: 1-231
Cow position: chr24:24662039-24662272 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 116, 41

Conread position: 1-258
Cow position: chr24:23186827-23187087 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 98, 38

Conread position: 1-265
Cow position: chr24:18356960-18357230 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 118, 38

Conread position: 1-305
Cow position: chr24:17104478-17104779 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 118, 38

Conread position: 1-313
Cow position: chr24:16510069-16509751 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 111, 41

Conread position: 1-319
Cow position: chr24:23694809-23695124 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 38

Conread position: 1-319
Cow position: chr24:34742845-34742521 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 109, 38

Conread position: 1-319
Cow position: chr24:43028238-43028553 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 118, 38

Conread position: 1-322
Cow position: chr24:5754927-5754611 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 36

Conread position: 1-322
Cow position: chr24:11119369-11119052 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 118, 38

Conread position: 1-322
Cow position: chr24:11887249-11886927 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 38

Conread position: 1-322
Cow position: chr24:15246551-15246865 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 38

Conread position: 1-322
Cow position: chr24:24490926-24491241 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 118, 38

Conread position: 1-322
Cow position: chr24:28063039-28062715 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 38

Conread position: 1-322
Cow position: chr24:29063567-29063876 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 41

Conread position: 1-322
Cow position: chr24:30313934-30314266 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 39

Conread position: 1-322
Cow position: chr24:33153869-33153552 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 1-326
Cow position: chr24:19658631-19658314 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 17, 41

Conread position: 2-182
Cow position: chr24:28043066-28042878 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 115, 37

Conread position: 2-192
Cow position: chr24:230377-230172 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 40

Conread position: 2-312
Cow position: chr24:34396088-34396394 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 207
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 116, 40

Conread position: 2-318
Cow position: chr24:30235961-30235643 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 37

Conread position: 2-322
Cow position: chr24:28319118-28319430 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 97, 37

Conread position: 3-182
Cow position: chr24:37823617-37823434 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 116, 33

Conread position: 3-255
Cow position: chr24:14457635-14457890 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 149, 39

Conread position: 3-294
Cow position: chr24:16089319-16089030 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 20, 40

Conread position: 3-311
Cow position: chr24:28496492-28496806 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 36

Conread position: 3-314
Cow position: chr24:5142035-5141718 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 39

Conread position: 3-314
Cow position: chr24:31359410-31359100 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 36

Conread position: 3-322
Cow position: chr24:1269873-1269574 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 36

Conread position: 3-322
Cow position: chr24:2402278-2402607 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 36

Conread position: 3-322
Cow position: chr24:24250812-24250502 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 36

Conread position: 3-322
Cow position: chr24:31816670-31816355 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 38

Conread position: 4-178
Cow position: chr24:17375727-17375559 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 115, 35

Conread position: 4-215
Cow position: chr24:29561481-29561701 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 38

Conread position: 5-213
Cow position: chr24:39791629-39791414 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 94, 37

Conread position: 5-322
Cow position: chr24:8886998-8886686 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 88, 37

Conread position: 6-264
Cow position: chr24:37037992-37037723 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 12, 39

Conread position: 6-270
Cow position: chr24:18017316-18017047 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 8, 29

Conread position: 6-300
Cow position: chr24:28990648-28990357 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 33

Conread position: 7-274
Cow position: chr24:27725926-27726199 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 112, 32

Conread position: 7-314
Cow position: chr24:31324372-31324057 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 16, 34

Conread position: 7-318
Cow position: chr24:26928855-26929175 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 248

Conread position: 7-319
Cow position: chr24:33230763-33230438 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 210
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 88

Conread position: 13-262
Cow position: chr24:19736254-19736502 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 26

Conread position: 16-284
Cow position: chr24:17434684-17434415 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 101, 9

Conread position: 18-252
Cow position: chr24:6450569-6450332 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 25

Conread position: 18-306
Cow position: chr24:31812264-31811970 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 21

Conread position: 18-314
Cow position: chr24:201562-201857 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 75, 21

Conread position: 18-322
Cow position: chr24:27748715-27748419 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 21

Conread position: 18-322
Cow position: chr24:27844453-27844750 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 101, 24

Conread position: 22-269
Cow position: chr24:19000120-18999866 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 10, 158

Conread position: 31-317
Cow position: chr24:22225249-22224952 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 62, 8

Conread position: 32-274
Cow position: chr24:15347651-15347409 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 85, 181

Conread position: 32-322
Cow position: chr24:32204734-32205024 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 110, 10

Conread position: 32-322
Cow position: chr24:33723784-33724081 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 99, 69

Conread position: 38-319
Cow position: chr24:45005003-45004727 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 81, 144

Conread position: 38-322
Cow position: chr24:29679257-29679541 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 80, 38

Conread position: 39-314
Cow position: chr24:34761948-34761671 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 76, 131

Conread position: 40-325
Cow position: chr24:212041-211748 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 43-284
Cow position: chr24:19769540-19769297 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 74, 154

Conread position: 43-304
Cow position: chr24:34008522-34008793 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 75, 254

Conread position: 43-308
Cow position: chr24:15373456-15373193 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 76, 151

Conread position: 43-319
Cow position: chr24:7914057-7913771 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 61, 0

Conread position: 43-320
Cow position: chr24:24457199-24457475 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 76, 136

Conread position: 43-322
Cow position: chr24:42344946-42345239 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 44-322
Cow position: chr24:6150073-6149799 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 73, 124

Conread position: 44-322
Cow position: chr24:30544816-30545086 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 30

Conread position: 45-280
Cow position: chr24:18355257-18355030 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 181, 99

Conread position: 45-318
Cow position: chr24:27149432-27149171 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 48-322
Cow position: chr24:37650720-37650440 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 243

Conread position: 49-244
Cow position: chr24:32054706-32054503 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 49-306
Cow position: chr24:34578932-34579180 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 68, 62

Conread position: 49-322
Cow position: chr24:3493929-3493662 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 68, 145

Conread position: 49-322
Cow position: chr24:33221895-33222170 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 219

Conread position: 49-323
Cow position: chr24:17284941-17285229 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 144

Conread position: 52-296
Cow position: chr24:39143654-39143400 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 41, 67

Conread position: 52-322
Cow position: chr24:16994923-16994663 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 38

Conread position: 57-243
Cow position: chr24:43967462-43967656 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 60-334
Cow position: chr24:10012786-10012531 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 84

Conread position: 61-311
Cow position: chr24:39833482-39833735 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 98

Conread position: 61-329
Cow position: chr24:27608065-27608334 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 58, 132

Conread position: 134-319
Cow position: chr24:5435090-5435274 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 134

Show alignments to all cow chromosomes.