Cow genome map

Conread name: Bra1-olf_071_B12

Conread position: 1-152
Cow position: chr27:15003140-15002986 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 37

Conread position: 1-159
Cow position: chr27:30489570-30489416 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 118, 38

Conread position: 1-272
Cow position: chr27:1768783-1768511 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 118, 38

Conread position: 1-274
Cow position: chr27:26506585-26506838 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 147, 38

Conread position: 1-284
Cow position: chr27:20549871-20549580 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 38

Conread position: 1-302
Cow position: chr27:16589862-16589570 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 38

Conread position: 1-316
Cow position: chr27:29494060-29493760 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 116, 42

Conread position: 1-319
Cow position: chr27:16514017-16513722 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 16, 25

Conread position: 1-319
Cow position: chr27:16705091-16705406 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 114, 41

Conread position: 1-319
Cow position: chr27:17397614-17397287 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 38

Conread position: 1-322
Cow position: chr27:299540-299221 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 38

Conread position: 1-322
Cow position: chr27:4672852-4673183 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 39

Conread position: 1-322
Cow position: chr27:7412233-7412545 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 38

Conread position: 1-322
Cow position: chr27:15454051-15454374 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 38

Conread position: 1-322
Cow position: chr27:20641496-20641184 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 236
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 103, 91

Conread position: 1-322
Cow position: chr27:27038997-27038681 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 219
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 41

Conread position: 1-329
Cow position: chr27:6159823-6160150 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 113, 30

Conread position: 2-283
Cow position: chr27:26999580-26999292 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 114, 21

Conread position: 2-319
Cow position: chr27:7212870-7212553 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 16

Conread position: 2-322
Cow position: chr27:14670543-14670218 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 39

Conread position: 2-322
Cow position: chr27:19717755-19718086 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 15, 41

Conread position: 3-138
Cow position: chr27:788956-788820 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 37

Conread position: 3-218
Cow position: chr27:23560189-23559969 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 116, 36

Conread position: 3-257
Cow position: chr27:20481516-20481276 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 118, 36

Conread position: 3-272
Cow position: chr27:8405978-8405720 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 115, 23

Conread position: 3-310
Cow position: chr27:426812-427124 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 36

Conread position: 3-313
Cow position: chr27:23452302-23452634 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 11, 38

Conread position: 3-319
Cow position: chr27:26413414-26413096 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 28, 41

Conread position: 3-322
Cow position: chr27:10307458-10307133 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 39

Conread position: 3-322
Cow position: chr27:26238868-26239187 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 116, 29

Conread position: 3-322
Cow position: chr27:30914850-30915164 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 48, 25

Conread position: 3-329
Cow position: chr27:22418924-22418596 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 41

Conread position: 4-175
Cow position: chr27:12710091-12710261 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 33

Conread position: 4-238
Cow position: chr27:15378632-15378396 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 10, 39

Conread position: 4-258
Cow position: chr27:23594162-23594418 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 14, 38

Conread position: 4-267
Cow position: chr27:31148605-31148871 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 115, 17

Conread position: 4-322
Cow position: chr27:20828866-20828545 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 115, 21

Conread position: 4-322
Cow position: chr27:22035534-22035211 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 35

Conread position: 4-323
Cow position: chr27:28271307-28270983 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 216
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 113, 35

Conread position: 4-334
Cow position: chr27:4944671-4944353 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 115, 35

Conread position: 5-144
Cow position: chr27:7343584-7343445 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 20

Conread position: 5-274
Cow position: chr27:7615237-7614970 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 17, 29

Conread position: 5-307
Cow position: chr27:4835763-4835460 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 35

Conread position: 5-322
Cow position: chr27:15409192-15408881 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 34

Conread position: 5-322
Cow position: chr27:26959771-26959458 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 34

Conread position: 6-312
Cow position: chr27:1498160-1498467 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 88

Conread position: 6-319
Cow position: chr27:11480793-11480470 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 218
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 35

Conread position: 6-319
Cow position: chr27:21669272-21668965 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 33

Conread position: 6-322
Cow position: chr27:19685868-19685552 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 31

Conread position: 7-222
Cow position: chr27:26407313-26407099 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 112, 32

Conread position: 7-322
Cow position: chr27:28931957-28931625 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 34

Conread position: 11-249
Cow position: chr27:20092984-20092745 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 108, 28

Conread position: 11-305
Cow position: chr27:1122882-1123180 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 28

Conread position: 11-306
Cow position: chr27:23890788-23891084 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 108, 31

Conread position: 11-319
Cow position: chr27:8353329-8353636 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 28

Conread position: 11-322
Cow position: chr27:19387869-19388181 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 28

Conread position: 18-199
Cow position: chr27:23108043-23107858 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 21

Conread position: 18-258
Cow position: chr27:20656762-20656532 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 101, 21

Conread position: 18-262
Cow position: chr27:12191621-12191383 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 211, 24

Conread position: 18-270
Cow position: chr27:21213645-21213885 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 138, 21

Conread position: 18-274
Cow position: chr27:27389166-27388906 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 80, 21

Conread position: 18-312
Cow position: chr27:26150875-26151173 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 75, 24

Conread position: 18-318
Cow position: chr27:24014882-24014582 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 101, 21

Conread position: 18-322
Cow position: chr27:20553589-20553879 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 101, 21

Conread position: 32-322
Cow position: chr27:4806030-4805745 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 115, 7

Conread position: 32-322
Cow position: chr27:13251887-13252172 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 108, 58

Conread position: 34-322
Cow position: chr27:16284348-16284635 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 8

Conread position: 38-270
Cow position: chr27:16625776-16626010 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 187
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 80, 41

Conread position: 38-274
Cow position: chr27:11435446-11435206 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 226

Conread position: 38-314
Cow position: chr27:31231205-31230939 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 160, 0

Conread position: 38-337
Cow position: chr27:29431345-29431639 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 50

Conread position: 40-313
Cow position: chr27:30890169-30890444 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 91

Conread position: 41-306
Cow position: chr27:7649703-7649436 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 141

Conread position: 43-203
Cow position: chr27:20628950-20629109 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 74, 105

Conread position: 43-278
Cow position: chr27:15871042-15871285 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 43-284
Cow position: chr27:20283517-20283768 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 226

Conread position: 43-312
Cow position: chr27:19660813-19661094 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 271

Conread position: 43-319
Cow position: chr27:29831816-29831527 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 74, 233

Conread position: 43-322
Cow position: chr27:8062469-8062194 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 74, 110

Conread position: 43-322
Cow position: chr27:18593154-18593433 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 47

Conread position: 43-322
Cow position: chr27:23472140-23472418 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 36

Conread position: 44-318
Cow position: chr27:22454893-22454623 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 73, 107

Conread position: 44-322
Cow position: chr27:815244-815527 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 247

Conread position: 48-322
Cow position: chr27:26433921-26433649 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 71, 181

Conread position: 49-319
Cow position: chr27:3784-4047 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 70, 63

Conread position: 49-322
Cow position: chr27:1058790-1058517 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 40, 110

Conread position: 49-322
Cow position: chr27:4829924-4829645 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 10

Conread position: 51-284
Cow position: chr27:22569673-22569898 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 91, 0

Conread position: 52-271
Cow position: chr27:11159898-11160111 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 65, 86

Conread position: 52-274
Cow position: chr27:27442279-27442052 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 65, 114

Conread position: 52-287
Cow position: chr27:20354487-20354712 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 30

Conread position: 52-302
Cow position: chr27:435124-435378 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 67, 128

Conread position: 52-314
Cow position: chr27:22513787-22513520 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 57, 67

Conread position: 52-319
Cow position: chr27:30764921-30765191 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 224

Conread position: 57-299
Cow position: chr27:20789484-20789240 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 62, 135

Show alignments to all cow chromosomes.