Cow genome map
| Conread name: | Bra1-olf_071_B12 |
| Conread position: | 1-139 |
| Cow position: | chr3:41652469-41652330 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 16, 39 |
| Conread position: | 1-202 |
| Cow position: | chr3:69785532-69785739 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 95, 42 |
| Conread position: | 1-225 |
| Cow position: | chr3:17058454-17058676 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 103, 41 |
| Conread position: | 1-249 |
| Cow position: | chr3:53508703-53508461 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 116, 38 |
| Conread position: | 1-254 |
| Cow position: | chr3:48072790-48073039 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 117, 38 |
| Conread position: | 1-258 |
| Cow position: | chr3:26874682-26874421 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 112, 41 |
| Conread position: | 1-263 |
| Cow position: | chr3:68616238-68616499 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-274 |
| Cow position: | chr3:20677750-20678020 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 41 |
| Conread position: | 1-278 |
| Cow position: | chr3:4050285-4050006 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 113, 41 |
| Conread position: | 1-280 |
| Cow position: | chr3:53428825-53429086 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-283 |
| Cow position: | chr3:76267883-76268176 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 116, 41 |
| Conread position: | 1-284 |
| Cow position: | chr3:23408266-23408546 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 38 |
| Conread position: | 1-298 |
| Cow position: | chr3:57760590-57760293 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 116, 38 |
| Conread position: | 1-311 |
| Cow position: | chr3:26681722-26682012 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 126, 38 |
| Conread position: | 1-312 |
| Cow position: | chr3:15159123-15158822 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-312 |
| Cow position: | chr3:48363164-48362862 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 41 |
| Conread position: | 1-313 |
| Cow position: | chr3:61224650-61224955 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 21, 40 |
| Conread position: | 1-314 |
| Cow position: | chr3:12711823-12712144 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 116, 41 |
| Conread position: | 1-314 |
| Cow position: | chr3:78945747-78946058 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 1-319 |
| Cow position: | chr3:32585242-32584932 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 118, 41 |
| Conread position: | 1-319 |
| Cow position: | chr3:45881990-45881683 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-319 |
| Cow position: | chr3:54946223-54945898 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-319 |
| Cow position: | chr3:57624556-57624241 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 108, 41 |
| Conread position: | 1-319 |
| Cow position: | chr3:62789083-62789426 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 117, 38 |
| Conread position: | 1-319 |
| Cow position: | chr3:67704638-67704314 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 38 |
| Conread position: | 1-319 |
| Cow position: | chr3:70334603-70334928 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 116, 43 |
| Conread position: | 1-322 |
| Cow position: | chr3:4461393-4461718 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 122, 17 |
| Conread position: | 1-322 |
| Cow position: | chr3:52608274-52607954 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 41 |
| Conread position: | 1-322 |
| Cow position: | chr3:53150423-53150098 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 38 |
| Conread position: | 1-322 |
| Cow position: | chr3:55271953-55272272 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-322 |
| Cow position: | chr3:56059903-56059578 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 38 |
| Conread position: | 1-322 |
| Cow position: | chr3:56476774-56476453 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-322 |
| Cow position: | chr3:78077282-78076960 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 38 |
| Conread position: | 1-322 |
| Cow position: | chr3:83455060-83455381 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 234 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 142, 38 |
| Conread position: | 1-323 |
| Cow position: | chr3:14552967-14552648 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 41 |
| Conread position: | 1-325 |
| Cow position: | chr3:13507560-13507231 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 38 |
| Conread position: | 1-330 |
| Cow position: | chr3:11987421-11987094 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 2-173 |
| Cow position: | chr3:64196917-64196739 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 117, 37 |
| Conread position: | 2-182 |
| Cow position: | chr3:49363200-49363021 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 127, 37 |
| Conread position: | 2-230 |
| Cow position: | chr3:73237284-73237053 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 117, 22 |
| Conread position: | 2-238 |
| Cow position: | chr3:79196850-79196610 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 117, 37 |
| Conread position: | 2-282 |
| Cow position: | chr3:63269315-63269032 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 2-310 |
| Cow position: | chr3:23105271-23105583 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 37 |
| Conread position: | 2-322 |
| Cow position: | chr3:26218961-26219291 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 14 |
| Conread position: | 2-333 |
| Cow position: | chr3:15506542-15506205 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 40 |
| Conread position: | 3-214 |
| Cow position: | chr3:59604933-59604725 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 116, 36 |
| Conread position: | 3-251 |
| Cow position: | chr3:74243084-74242833 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 3-272 |
| Cow position: | chr3:55189663-55189939 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 39 |
| Conread position: | 3-279 |
| Cow position: | chr3:59597270-59596995 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 3-283 |
| Cow position: | chr3:18686996-18686713 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 115, 39 |
| Conread position: | 3-284 |
| Cow position: | chr3:54100636-54100913 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 114, 39 |
| Conread position: | 3-294 |
| Cow position: | chr3:14599028-14598745 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 11, 40 |
| Conread position: | 3-307 |
| Cow position: | chr3:80072219-80071902 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 39 |
| Conread position: | 3-309 |
| Cow position: | chr3:70565648-70565954 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 31 |
| Conread position: | 3-314 |
| Cow position: | chr3:50768769-50768457 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 36 |
| Conread position: | 3-322 |
| Cow position: | chr3:29813321-29813014 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 3-323 |
| Cow position: | chr3:48296790-48296480 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 4-182 |
| Cow position: | chr3:3472129-3471944 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 135, 38 |
| Conread position: | 4-191 |
| Cow position: | chr3:64135807-64135612 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 35 |
| Conread position: | 4-208 |
| Cow position: | chr3:15950823-15951031 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 4-230 |
| Cow position: | chr3:76156076-76155846 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 103, 35 |
| Conread position: | 4-235 |
| Cow position: | chr3:3883727-3883965 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 114, 35 |
| Conread position: | 4-258 |
| Cow position: | chr3:60264624-60264884 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 42, 195 |
| Conread position: | 4-274 |
| Cow position: | chr3:22232565-22232837 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 4-283 |
| Cow position: | chr3:116279-116003 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 115, 188 |
| Conread position: | 4-318 |
| Cow position: | chr3:80565055-80564735 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 35 |
| Conread position: | 4-322 |
| Cow position: | chr3:70899982-70899671 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 4-322 |
| Cow position: | chr3:72391171-72390851 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 114, 35 |
| Conread position: | 4-322 |
| Cow position: | chr3:75080852-75080537 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 5-182 |
| Cow position: | chr3:47753314-47753130 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 114, 34 |
| Conread position: | 5-268 |
| Cow position: | chr3:76922575-76922842 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 34 |
| Conread position: | 5-273 |
| Cow position: | chr3:54506795-54506525 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 207 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 114, 34 |
| Conread position: | 5-308 |
| Cow position: | chr3:6182139-6182418 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 114, 34 |
| Conread position: | 5-312 |
| Cow position: | chr3:525434-525134 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 114, 34 |
| Conread position: | 5-319 |
| Cow position: | chr3:24852508-24852813 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 5-322 |
| Cow position: | chr3:18459438-18459749 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 27, 36 |
| Conread position: | 5-322 |
| Cow position: | chr3:53222101-53221785 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 34 |
| Conread position: | 5-322 |
| Cow position: | chr3:55835728-55836058 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 5-323 |
| Cow position: | chr3:65413188-65413506 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 5-325 |
| Cow position: | chr3:66292088-66292411 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 110, 34 |
| Conread position: | 6-314 |
| Cow position: | chr3:54781917-54782232 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 87, 19 |
| Conread position: | 6-318 |
| Cow position: | chr3:64280842-64281161 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 7-283 |
| Cow position: | chr3:66883855-66884135 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 11, 35 |
| Conread position: | 7-322 |
| Cow position: | chr3:2506393-2506710 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 35 |
| Conread position: | 8-322 |
| Cow position: | chr3:57577783-57577465 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 9-179 |
| Cow position: | chr3:31350020-31350196 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 110, 30 |
| Conread position: | 9-322 |
| Cow position: | chr3:58968819-58969125 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 30 |
| Conread position: | 10-318 |
| Cow position: | chr3:81277608-81277928 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 15 |
| Conread position: | 11-241 |
| Cow position: | chr3:55177664-55177905 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 11-265 |
| Cow position: | chr3:50069845-50069589 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 11-283 |
| Cow position: | chr3:74601196-74600922 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 11-314 |
| Cow position: | chr3:68707931-68708229 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 22 |
| Conread position: | 11-314 |
| Cow position: | chr3:68881040-68881337 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 21 |
| Conread position: | 11-319 |
| Cow position: | chr3:74533431-74533122 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 11-322 |
| Cow position: | chr3:10958158-10958458 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 108, 33 |
| Conread position: | 11-322 |
| Cow position: | chr3:44932595-44932279 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 11-322 |
| Cow position: | chr3:45647762-45647447 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 28 |
| Conread position: | 13-351 |
| Cow position: | chr3:49328024-49327678 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 26 |
| Conread position: | 15-329 |
| Cow position: | chr3:26970893-26970589 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 18-207 |
| Cow position: | chr3:63177558-63177360 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 101, 21 |
| Conread position: | 18-271 |
| Cow position: | chr3:22676035-22676269 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 18-272 |
| Cow position: | chr3:61840350-61840095 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 82, 24 |
| Conread position: | 18-284 |
| Cow position: | chr3:59101902-59101635 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 104, 21 |
| Conread position: | 18-286 |
| Cow position: | chr3:28908128-28908397 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 18-318 |
| Cow position: | chr3:17936764-17937064 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 21 |
| Conread position: | 18-322 |
| Cow position: | chr3:23168991-23169299 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 21 |
| Conread position: | 18-322 |
| Cow position: | chr3:45534221-45534529 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 21 |
| Conread position: | 19-322 |
| Cow position: | chr3:53739111-53739419 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 100, 23 |
| Conread position: | 21-270 |
| Cow position: | chr3:2630846-2630613 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 22-178 |
| Cow position: | chr3:18001269-18001111 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 17 |
| Conread position: | 22-313 |
| Cow position: | chr3:11712036-11711732 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 22-315 |
| Cow position: | chr3:70896119-70895824 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 17 |
| Conread position: | 25-263 |
| Cow position: | chr3:59799316-59799073 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 28-330 |
| Cow position: | chr3:71161864-71161558 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 31-280 |
| Cow position: | chr3:54373798-54374052 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 86, 8 |
| Conread position: | 31-318 |
| Cow position: | chr3:49679194-49678897 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 86, 8 |
| Conread position: | 31-319 |
| Cow position: | chr3:43233568-43233277 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 86, 8 |
| Conread position: | 32-200 |
| Cow position: | chr3:12670554-12670725 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 85, 5 |
| Conread position: | 32-229 |
| Cow position: | chr3:74584269-74584077 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 87, 7 |
| Conread position: | 32-244 |
| Cow position: | chr3:24935426-24935215 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 85, 12 |
| Conread position: | 32-277 |
| Cow position: | chr3:17934877-17935122 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 10 |
| Conread position: | 32-292 |
| Cow position: | chr3:75711367-75711108 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 7 |
| Conread position: | 32-317 |
| Cow position: | chr3:9663111-9663411 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 83, 10 |
| Conread position: | 33-283 |
| Cow position: | chr3:38035529-38035786 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 35-225 |
| Cow position: | chr3:32457252-32457064 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 82, 7 |
| Conread position: | 37-307 |
| Cow position: | chr3:76713268-76713536 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 81, 52 |
| Conread position: | 38-251 |
| Cow position: | chr3:46541773-46541989 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 81, 132 |
| Conread position: | 38-256 |
| Cow position: | chr3:55109557-55109782 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 79, 216 |
| Conread position: | 38-266 |
| Cow position: | chr3:62046720-62046485 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 74, 155 |
| Conread position: | 38-287 |
| Cow position: | chr3:66609788-66610041 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 79, 55 |
| Conread position: | 38-319 |
| Cow position: | chr3:2396733-2397009 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 52 |
| Conread position: | 38-326 |
| Cow position: | chr3:68303370-68303095 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 39-232 |
| Cow position: | chr3:1785190-1785385 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 80, 148 |
| Conread position: | 39-322 |
| Cow position: | chr3:65800640-65800364 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 41-319 |
| Cow position: | chr3:30463119-30463392 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 63, 77 |
| Conread position: | 43-179 |
| Cow position: | chr3:478749-478891 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 75, 38 |
| Conread position: | 43-270 |
| Cow position: | chr3:26982109-26981883 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 74, 91 |
| Conread position: | 43-270 |
| Cow position: | chr3:34669682-34669909 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 69, 89 |
| Conread position: | 43-289 |
| Cow position: | chr3:67698327-67698079 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 71, 114 |
| Conread position: | 43-307 |
| Cow position: | chr3:25477853-25477598 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 74, 47 |
| Conread position: | 43-309 |
| Cow position: | chr3:74878538-74878806 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 74, 220 |
| Conread position: | 43-314 |
| Cow position: | chr3:73395167-73394895 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 75, 63 |
| Conread position: | 43-314 |
| Cow position: | chr3:73709098-73708827 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 79, 156 |
| Conread position: | 43-318 |
| Cow position: | chr3:15954034-15954302 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 74, 186 |
| Conread position: | 43-319 |
| Cow position: | chr3:5044762-5045036 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 74, 100 |
| Conread position: | 43-322 |
| Cow position: | chr3:23471408-23471697 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 65, 159 |
| Conread position: | 43-322 |
| Cow position: | chr3:51234045-51234325 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 37, 33 |
| Conread position: | 43-322 |
| Cow position: | chr3:54903615-54903339 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 184, 69 |
| Conread position: | 43-322 |
| Cow position: | chr3:71497087-71497374 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 72, 164 |
| Conread position: | 44-319 |
| Cow position: | chr3:69750661-69750926 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 207 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 69, 22 |
| Conread position: | 45-319 |
| Cow position: | chr3:5097256-5096978 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 72, 227 |
| Conread position: | 48-322 |
| Cow position: | chr3:26920954-26920667 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 100, 142 |
| Conread position: | 48-322 |
| Cow position: | chr3:38691360-38691635 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 61, 210 |
| Conread position: | 49-189 |
| Cow position: | chr3:19626461-19626610 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 49-314 |
| Cow position: | chr3:56523401-56523652 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 70, 23 |
| Conread position: | 50-264 |
| Cow position: | chr3:55819802-55819572 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 52-317 |
| Cow position: | chr3:79902538-79902279 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 65, 91 |
| Conread position: | 52-322 |
| Cow position: | chr3:2216410-2216130 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 52-334 |
| Cow position: | chr3:68145801-68146079 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 210 |
| Conread position: | 145-318 |
| Cow position: | chr3:51255732-51255560 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 114 |
Show alignments to all cow chromosomes.