Cow genome map
| Conread name: | Bra1-olf_071_B12 |
| Conread position: | 1-147 |
| Cow position: | chr5:9233846-9233993 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 1-179 |
| Cow position: | chr5:20288121-20288305 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 118, 41 |
| Conread position: | 1-230 |
| Cow position: | chr5:50575925-50575693 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 114, 41 |
| Conread position: | 1-249 |
| Cow position: | chr5:58446950-58446692 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 42 |
| Conread position: | 1-270 |
| Cow position: | chr5:54767770-54768042 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 130, 24 |
| Conread position: | 1-272 |
| Cow position: | chr5:25495216-25495482 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 98, 38 |
| Conread position: | 1-273 |
| Cow position: | chr5:64591953-64592227 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 102, 38 |
| Conread position: | 1-274 |
| Cow position: | chr5:45574763-45574485 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 16, 39 |
| Conread position: | 1-292 |
| Cow position: | chr5:56877624-56877338 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 84 |
| Conread position: | 1-293 |
| Cow position: | chr5:40109634-40109347 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 38 |
| Conread position: | 1-302 |
| Cow position: | chr5:45397711-45397418 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 38 |
| Conread position: | 1-305 |
| Cow position: | chr5:54060418-54060110 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 132, 41 |
| Conread position: | 1-314 |
| Cow position: | chr5:15364024-15363718 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-318 |
| Cow position: | chr5:5110927-5111253 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 1-322 |
| Cow position: | chr5:11229531-11229854 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 92 |
| Conread position: | 1-322 |
| Cow position: | chr5:23168684-23168999 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 41 |
| Conread position: | 1-322 |
| Cow position: | chr5:28302601-28302920 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 106, 38 |
| Conread position: | 1-322 |
| Cow position: | chr5:32338824-32339156 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 94, 21 |
| Conread position: | 1-322 |
| Cow position: | chr5:32394741-32394420 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 116, 38 |
| Conread position: | 1-322 |
| Cow position: | chr5:41165230-41164908 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-322 |
| Cow position: | chr5:44446723-44447067 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-322 |
| Cow position: | chr5:44993907-44994218 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 112, 43 |
| Conread position: | 1-322 |
| Cow position: | chr5:45845546-45845876 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 1-322 |
| Cow position: | chr5:47601954-47601636 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-322 |
| Cow position: | chr5:61810913-61810612 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-322 |
| Cow position: | chr5:65753003-65752676 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 1-322 |
| Cow position: | chr5:69337962-69337647 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 38 |
| Conread position: | 1-322 |
| Cow position: | chr5:69731642-69731337 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 117, 38 |
| Conread position: | 1-323 |
| Cow position: | chr5:38833263-38832938 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-324 |
| Cow position: | chr5:50600190-50599871 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 38 |
| Conread position: | 1-334 |
| Cow position: | chr5:30253883-30253546 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 2-155 |
| Cow position: | chr5:50824733-50824580 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 115, 37 |
| Conread position: | 2-171 |
| Cow position: | chr5:26548999-26549175 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 117, 37 |
| Conread position: | 2-177 |
| Cow position: | chr5:35982596-35982780 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 2-200 |
| Cow position: | chr5:59626831-59627036 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 117, 30 |
| Conread position: | 2-223 |
| Cow position: | chr5:43403046-43402815 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 115, 37 |
| Conread position: | 2-247 |
| Cow position: | chr5:14920789-14921039 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 117, 42 |
| Conread position: | 2-284 |
| Cow position: | chr5:20422052-20422325 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 97, 37 |
| Conread position: | 2-314 |
| Cow position: | chr5:24996082-24996398 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 37 |
| Conread position: | 2-317 |
| Cow position: | chr5:35685076-35684759 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 40 |
| Conread position: | 2-319 |
| Cow position: | chr5:12322666-12322978 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 117, 37 |
| Conread position: | 2-322 |
| Cow position: | chr5:9893982-9894306 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 37 |
| Conread position: | 2-322 |
| Cow position: | chr5:21617599-21617275 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 37 |
| Conread position: | 2-322 |
| Cow position: | chr5:35969674-35969362 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 2-322 |
| Cow position: | chr5:56524316-56523993 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 2-324 |
| Cow position: | chr5:56467832-56467522 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 3-248 |
| Cow position: | chr5:60183945-60183691 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 3-268 |
| Cow position: | chr5:44726194-44726456 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 116, 36 |
| Conread position: | 3-271 |
| Cow position: | chr5:22667211-22666960 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 3-314 |
| Cow position: | chr5:4710012-4710319 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 116, 36 |
| Conread position: | 3-322 |
| Cow position: | chr5:29828186-29827873 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 230 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 105, 32 |
| Conread position: | 3-322 |
| Cow position: | chr5:55966741-55967063 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 22 |
| Conread position: | 3-322 |
| Cow position: | chr5:56070999-56070672 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 36 |
| Conread position: | 3-325 |
| Cow position: | chr5:50943016-50943337 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 4-174 |
| Cow position: | chr5:24069529-24069362 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 4-249 |
| Cow position: | chr5:60599061-60599296 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 24 |
| Conread position: | 4-257 |
| Cow position: | chr5:49440734-49440991 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 115, 14 |
| Conread position: | 4-274 |
| Cow position: | chr5:66366645-66366381 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 115, 24 |
| Conread position: | 4-279 |
| Cow position: | chr5:64026880-64027149 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 35 |
| Conread position: | 4-298 |
| Cow position: | chr5:42050692-42050391 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 4-299 |
| Cow position: | chr5:3582699-3582415 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 4-306 |
| Cow position: | chr5:30276829-30276529 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 4-307 |
| Cow position: | chr5:30629018-30629323 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 4-314 |
| Cow position: | chr5:72895825-72895520 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 4-322 |
| Cow position: | chr5:21829006-21828684 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 4-322 |
| Cow position: | chr5:37646405-37646731 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 38 |
| Conread position: | 5-230 |
| Cow position: | chr5:66551758-66551994 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 81, 34 |
| Conread position: | 5-242 |
| Cow position: | chr5:54375364-54375611 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 96, 34 |
| Conread position: | 5-297 |
| Cow position: | chr5:12673340-12673620 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 114, 34 |
| Conread position: | 5-318 |
| Cow position: | chr5:6045434-6045111 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 34 |
| Conread position: | 5-322 |
| Cow position: | chr5:26990528-26990213 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 107, 19 |
| Conread position: | 5-322 |
| Cow position: | chr5:56028403-56028711 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 34 |
| Conread position: | 5-326 |
| Cow position: | chr5:51151218-51151547 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 6-215 |
| Cow position: | chr5:69636364-69636158 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 12, 36 |
| Conread position: | 6-255 |
| Cow position: | chr5:33560595-33560851 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 6-269 |
| Cow position: | chr5:63426866-63427137 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 6-297 |
| Cow position: | chr5:17768012-17768302 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 33 |
| Conread position: | 6-299 |
| Cow position: | chr5:12351669-12351947 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 18 |
| Conread position: | 6-302 |
| Cow position: | chr5:35246971-35247271 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 33, 169 |
| Conread position: | 6-307 |
| Cow position: | chr5:65967594-65967897 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 33 |
| Conread position: | 6-322 |
| Cow position: | chr5:65941112-65941434 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 34 |
| Conread position: | 6-323 |
| Cow position: | chr5:4221116-4220799 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 6-329 |
| Cow position: | chr5:62172549-62172231 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 36 |
| Conread position: | 7-322 |
| Cow position: | chr5:50215425-50215739 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 8-253 |
| Cow position: | chr5:27171858-27172095 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 134, 34 |
| Conread position: | 8-322 |
| Cow position: | chr5:57074196-57074515 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 34 |
| Conread position: | 11-181 |
| Cow position: | chr5:69099852-69099675 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 28 |
| Conread position: | 11-300 |
| Cow position: | chr5:50821915-50821620 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 11-306 |
| Cow position: | chr5:30303023-30302731 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 11-314 |
| Cow position: | chr5:29903391-29903695 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 28 |
| Conread position: | 11-318 |
| Cow position: | chr5:15721942-15722231 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 11-319 |
| Cow position: | chr5:6286301-6286604 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 31 |
| Conread position: | 13-201 |
| Cow position: | chr5:26150291-26150484 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 106, 26 |
| Conread position: | 13-318 |
| Cow position: | chr5:46509735-46510043 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 26 |
| Conread position: | 16-322 |
| Cow position: | chr5:64175999-64176301 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 26 |
| Conread position: | 18-310 |
| Cow position: | chr5:30949790-30950088 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 21 |
| Conread position: | 18-312 |
| Cow position: | chr5:57737224-57736944 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 18-319 |
| Cow position: | chr5:7044580-7044888 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 21 |
| Conread position: | 18-319 |
| Cow position: | chr5:57934983-57935291 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 21 |
| Conread position: | 18-319 |
| Cow position: | chr5:66257761-66257464 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 18-322 |
| Cow position: | chr5:15598113-15598414 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 18-322 |
| Cow position: | chr5:31640550-31640247 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 21 |
| Conread position: | 18-322 |
| Cow position: | chr5:48009734-48010027 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 24 |
| Conread position: | 22-266 |
| Cow position: | chr5:49474424-49474670 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 97, 17 |
| Conread position: | 22-322 |
| Cow position: | chr5:45804180-45803880 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 17 |
| Conread position: | 25-314 |
| Cow position: | chr5:65136381-65136111 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 25-322 |
| Cow position: | chr5:53835834-53835534 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 31-307 |
| Cow position: | chr5:34887083-34887363 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 76, 8 |
| Conread position: | 31-314 |
| Cow position: | chr5:47316862-47317142 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 86, 8 |
| Conread position: | 31-318 |
| Cow position: | chr5:56518110-56518386 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 88, 8 |
| Conread position: | 32-179 |
| Cow position: | chr5:61102827-61102673 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 66, 12 |
| Conread position: | 32-274 |
| Cow position: | chr5:35763373-35763142 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 87, 7 |
| Conread position: | 32-307 |
| Cow position: | chr5:41009893-41010162 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 7 |
| Conread position: | 32-312 |
| Cow position: | chr5:43992435-43992150 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 85, 10 |
| Conread position: | 32-322 |
| Cow position: | chr5:57575884-57575585 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 7 |
| Conread position: | 32-322 |
| Cow position: | chr5:67932361-67932642 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 80, 10 |
| Conread position: | 32-334 |
| Cow position: | chr5:62639015-62638714 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 33-276 |
| Cow position: | chr5:72951954-72951701 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 86, 6 |
| Conread position: | 36-322 |
| Cow position: | chr5:65601565-65601280 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 78, 135 |
| Conread position: | 37-290 |
| Cow position: | chr5:19278599-19278853 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 56, 66 |
| Conread position: | 38-249 |
| Cow position: | chr5:42670758-42670967 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 38-280 |
| Cow position: | chr5:73418184-73418425 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 80, 72 |
| Conread position: | 38-284 |
| Cow position: | chr5:65883666-65883922 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 38-322 |
| Cow position: | chr5:11668079-11668359 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 79, 218 |
| Conread position: | 38-322 |
| Cow position: | chr5:17999390-17999675 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 93, 62 |
| Conread position: | 38-322 |
| Cow position: | chr5:58793501-58793795 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 225 |
| Conread position: | 38-322 |
| Cow position: | chr5:65588805-65588527 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 66, 100 |
| Conread position: | 39-177 |
| Cow position: | chr5:31052485-31052346 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 39-194 |
| Cow position: | chr5:56338916-56339074 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 76, 150 |
| Conread position: | 39-322 |
| Cow position: | chr5:24349212-24348931 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 78, 238 |
| Conread position: | 41-322 |
| Cow position: | chr5:34463475-34463766 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 245 |
| Conread position: | 43-245 |
| Cow position: | chr5:43371094-43371305 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 77 |
| Conread position: | 43-291 |
| Cow position: | chr5:19524001-19523742 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 75, 224 |
| Conread position: | 43-306 |
| Cow position: | chr5:34050219-34049945 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 74, 237 |
| Conread position: | 43-318 |
| Cow position: | chr5:57265803-57266074 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 69, 161 |
| Conread position: | 43-322 |
| Cow position: | chr5:62142777-62142490 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 215 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 74, 168 |
| Conread position: | 48-305 |
| Cow position: | chr5:69520987-69520727 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 71, 95 |
| Conread position: | 49-245 |
| Cow position: | chr5:56635990-56635793 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 80 |
| Conread position: | 52-323 |
| Cow position: | chr5:22738197-22737924 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 102 |
| Conread position: | 54-298 |
| Cow position: | chr5:67540111-67540360 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 63, 242 |
| Conread position: | 59-284 |
| Cow position: | chr5:31144702-31144933 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 60, 124 |
| Conread position: | 62-272 |
| Cow position: | chr5:991546-991332 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 66-296 |
| Cow position: | chr5:27155095-27154865 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 78 |
Show alignments to all cow chromosomes.