Cow genome map
| Conread name: | Bra1-olf_071_B12 |
| Conread position: | 1-179 |
| Cow position: | chr6:48097443-48097629 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 38 |
| Conread position: | 1-186 |
| Cow position: | chr6:49437489-49437298 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-220 |
| Cow position: | chr6:18117894-18118120 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-228 |
| Cow position: | chr6:693988-694223 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 193 |
| Conread position: | 1-229 |
| Cow position: | chr6:22985700-22985935 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 118, 27 |
| Conread position: | 1-240 |
| Cow position: | chr6:6067545-6067780 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 42 |
| Conread position: | 1-243 |
| Cow position: | chr6:61269468-61269219 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 24, 32 |
| Conread position: | 1-246 |
| Cow position: | chr6:17794608-17794850 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 118, 41 |
| Conread position: | 1-248 |
| Cow position: | chr6:66375177-66375426 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-255 |
| Cow position: | chr6:60273853-60274109 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 59, 38 |
| Conread position: | 1-264 |
| Cow position: | chr6:61524049-61524310 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-272 |
| Cow position: | chr6:47799449-47799171 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 118, 41 |
| Conread position: | 1-289 |
| Cow position: | chr6:38640389-38640094 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-303 |
| Cow position: | chr6:57571635-57571326 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-304 |
| Cow position: | chr6:46282848-46283146 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-307 |
| Cow position: | chr6:24468240-24468548 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 38 |
| Conread position: | 1-312 |
| Cow position: | chr6:60740172-60739859 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 13, 43 |
| Conread position: | 1-314 |
| Cow position: | chr6:21869493-21869803 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 98, 38 |
| Conread position: | 1-317 |
| Cow position: | chr6:8966253-8965928 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 38 |
| Conread position: | 1-317 |
| Cow position: | chr6:54867673-54867349 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 116, 41 |
| Conread position: | 1-318 |
| Cow position: | chr6:10105823-10106158 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-319 |
| Cow position: | chr6:15243411-15243088 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-319 |
| Cow position: | chr6:28976884-28977192 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 118, 41 |
| Conread position: | 1-322 |
| Cow position: | chr6:6401106-6400782 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 17 |
| Conread position: | 1-322 |
| Cow position: | chr6:38441328-38441016 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 24, 32 |
| Conread position: | 1-322 |
| Cow position: | chr6:39358185-39358507 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 108, 38 |
| Conread position: | 1-322 |
| Cow position: | chr6:45690454-45690759 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-322 |
| Cow position: | chr6:46465977-46465662 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 1-322 |
| Cow position: | chr6:53652196-53651875 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 41 |
| Conread position: | 1-334 |
| Cow position: | chr6:54990845-54991180 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 2-197 |
| Cow position: | chr6:2078660-2078865 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 117, 37 |
| Conread position: | 2-221 |
| Cow position: | chr6:67643536-67643760 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 117, 46 |
| Conread position: | 2-280 |
| Cow position: | chr6:62670020-62669746 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 115, 37 |
| Conread position: | 2-293 |
| Cow position: | chr6:55282138-55282427 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 2-314 |
| Cow position: | chr6:12551425-12551109 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 21, 38 |
| Conread position: | 2-318 |
| Cow position: | chr6:49421636-49421939 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 2-322 |
| Cow position: | chr6:13687659-13687977 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 31 |
| Conread position: | 2-322 |
| Cow position: | chr6:17414290-17414617 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 37 |
| Conread position: | 2-322 |
| Cow position: | chr6:46860013-46860334 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 23 |
| Conread position: | 2-322 |
| Cow position: | chr6:63720357-63720033 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 12, 39 |
| Conread position: | 2-325 |
| Cow position: | chr6:24781404-24781733 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 3-224 |
| Cow position: | chr6:29248631-29248419 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 116, 39 |
| Conread position: | 3-231 |
| Cow position: | chr6:23465880-23466108 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 116, 36 |
| Conread position: | 3-314 |
| Cow position: | chr6:120401-120081 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 3-314 |
| Cow position: | chr6:8209452-8209747 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 36 |
| Conread position: | 3-314 |
| Cow position: | chr6:48112350-48112046 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 36 |
| Conread position: | 3-316 |
| Cow position: | chr6:528130-528437 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 116, 39 |
| Conread position: | 3-318 |
| Cow position: | chr6:64432094-64431777 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 3-319 |
| Cow position: | chr6:47575060-47574742 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 36 |
| Conread position: | 3-322 |
| Cow position: | chr6:8637435-8637109 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 36 |
| Conread position: | 3-322 |
| Cow position: | chr6:36196365-36196048 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 40 |
| Conread position: | 3-322 |
| Cow position: | chr6:46571259-46570952 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 3-322 |
| Cow position: | chr6:52478257-52478593 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 36 |
| Conread position: | 4-175 |
| Cow position: | chr6:30024038-30023870 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 4-226 |
| Cow position: | chr6:17068495-17068723 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 115, 38 |
| Conread position: | 4-244 |
| Cow position: | chr6:143222-143460 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 113, 35 |
| Conread position: | 4-268 |
| Cow position: | chr6:58597352-58597620 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 4-272 |
| Cow position: | chr6:32287788-32287518 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 4-292 |
| Cow position: | chr6:60118303-60118010 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 112, 38 |
| Conread position: | 4-313 |
| Cow position: | chr6:7128251-7128558 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 4-314 |
| Cow position: | chr6:54132965-54132660 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 28 |
| Conread position: | 4-314 |
| Cow position: | chr6:58590426-58590116 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 4-322 |
| Cow position: | chr6:38207336-38207662 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 4-322 |
| Cow position: | chr6:53460411-53460738 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 288 |
| Conread position: | 5-204 |
| Cow position: | chr6:60144046-60144251 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 114, 34 |
| Conread position: | 5-282 |
| Cow position: | chr6:61168907-61168645 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 114, 37 |
| Conread position: | 5-307 |
| Cow position: | chr6:34475405-34475705 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 12, 117 |
| Conread position: | 5-322 |
| Cow position: | chr6:44194398-44194711 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 30 |
| Conread position: | 5-322 |
| Cow position: | chr6:66131457-66131142 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 6-169 |
| Cow position: | chr6:58725521-58725358 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 8, 21 |
| Conread position: | 6-177 |
| Cow position: | chr6:43651903-43651739 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 113, 33 |
| Conread position: | 6-314 |
| Cow position: | chr6:19264348-19264658 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 33 |
| Conread position: | 6-319 |
| Cow position: | chr6:13040593-13040290 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 44 |
| Conread position: | 6-322 |
| Cow position: | chr6:38218819-38218506 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 8-322 |
| Cow position: | chr6:31526195-31525882 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 105, 31 |
| Conread position: | 9-318 |
| Cow position: | chr6:35613269-35613576 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 69, 30 |
| Conread position: | 11-256 |
| Cow position: | chr6:7119473-7119714 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 106, 28 |
| Conread position: | 11-311 |
| Cow position: | chr6:26915474-26915175 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 25 |
| Conread position: | 11-319 |
| Cow position: | chr6:60350146-60350462 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 11-322 |
| Cow position: | chr6:51581110-51581423 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 21 |
| Conread position: | 13-325 |
| Cow position: | chr6:47640288-47640607 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 26 |
| Conread position: | 15-322 |
| Cow position: | chr6:21231666-21231370 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 226 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 104, 24 |
| Conread position: | 16-274 |
| Cow position: | chr6:50976189-50975936 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 103, 20 |
| Conread position: | 16-322 |
| Cow position: | chr6:37634938-37634623 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 7, 24 |
| Conread position: | 18-182 |
| Cow position: | chr6:60266044-60266212 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 98, 21 |
| Conread position: | 18-262 |
| Cow position: | chr6:59603069-59603317 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 101, 24 |
| Conread position: | 18-314 |
| Cow position: | chr6:20097820-20098122 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 25 |
| Conread position: | 18-322 |
| Cow position: | chr6:4864408-4864706 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 96, 21 |
| Conread position: | 18-322 |
| Cow position: | chr6:36202957-36202662 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 101, 21 |
| Conread position: | 20-322 |
| Cow position: | chr6:29210635-29210335 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 26, 97 |
| Conread position: | 21-213 |
| Cow position: | chr6:60468373-60468176 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 22-312 |
| Cow position: | chr6:65871171-65870867 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 20 |
| Conread position: | 28-319 |
| Cow position: | chr6:32122036-32121748 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 11 |
| Conread position: | 31-246 |
| Cow position: | chr6:6063168-6063385 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 86, 8 |
| Conread position: | 31-291 |
| Cow position: | chr6:54936705-54936438 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 8 |
| Conread position: | 31-312 |
| Cow position: | chr6:55763979-55763698 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 87, 8 |
| Conread position: | 31-326 |
| Cow position: | chr6:54701667-54701368 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 62, 8 |
| Conread position: | 32-173 |
| Cow position: | chr6:53090134-53089986 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 87, 10 |
| Conread position: | 32-297 |
| Cow position: | chr6:36652547-36652273 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 84, 14 |
| Conread position: | 32-314 |
| Cow position: | chr6:27888476-27888190 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 85, 18 |
| Conread position: | 32-322 |
| Cow position: | chr6:23247841-23248129 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 7 |
| Conread position: | 32-322 |
| Cow position: | chr6:47339231-47339514 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 85, 10 |
| Conread position: | 32-322 |
| Cow position: | chr6:50577645-50577354 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 10 |
| Conread position: | 33-334 |
| Cow position: | chr6:899169-899468 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 6 |
| Conread position: | 35-307 |
| Cow position: | chr6:37783522-37783267 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 82, 7 |
| Conread position: | 35-322 |
| Cow position: | chr6:49002618-49002891 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 72, 7 |
| Conread position: | 37-299 |
| Cow position: | chr6:13367406-13367150 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 71, 86 |
| Conread position: | 38-189 |
| Cow position: | chr6:32516989-32517137 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 81, 43 |
| Conread position: | 38-274 |
| Cow position: | chr6:66874471-66874229 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 76, 124 |
| Conread position: | 38-318 |
| Cow position: | chr6:12542810-12543095 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 81, 244 |
| Conread position: | 38-322 |
| Cow position: | chr6:16700381-16700093 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 84, 251 |
| Conread position: | 38-322 |
| Cow position: | chr6:28318517-28318243 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 67, 41 |
| Conread position: | 41-319 |
| Cow position: | chr6:15937738-15938016 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 76, 130 |
| Conread position: | 43-261 |
| Cow position: | chr6:54208020-54208248 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 66, 205 |
| Conread position: | 43-273 |
| Cow position: | chr6:16261893-16261665 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 69, 105 |
| Conread position: | 43-291 |
| Cow position: | chr6:21399641-21399892 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 66, 76 |
| Conread position: | 43-296 |
| Cow position: | chr6:15022432-15022701 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 76, 219 |
| Conread position: | 43-318 |
| Cow position: | chr6:5095427-5095712 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 64, 246 |
| Conread position: | 43-322 |
| Cow position: | chr6:40032305-40032026 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 74, 47 |
| Conread position: | 43-322 |
| Cow position: | chr6:52412974-52412688 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 92, 74 |
| Conread position: | 43-323 |
| Cow position: | chr6:60057540-60057823 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 74, 161 |
| Conread position: | 44-311 |
| Cow position: | chr6:61608626-61608352 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 44-322 |
| Cow position: | chr6:31535455-31535737 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 166 |
| Conread position: | 45-322 |
| Cow position: | chr6:8787924-8788203 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 77, 212 |
| Conread position: | 45-322 |
| Cow position: | chr6:10176189-10176469 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 72, 110 |
| Conread position: | 45-322 |
| Cow position: | chr6:26728419-26728693 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 139 |
| Conread position: | 48-322 |
| Cow position: | chr6:1703910-1703648 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 69, 35 |
| Conread position: | 49-318 |
| Cow position: | chr6:22502802-22503085 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 49-319 |
| Cow position: | chr6:30974151-30973878 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 69, 41 |
| Conread position: | 50-322 |
| Cow position: | chr6:12338101-12337818 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 67, 246 |
| Conread position: | 52-274 |
| Cow position: | chr6:16266830-16266597 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 98 |
| Conread position: | 52-279 |
| Cow position: | chr6:50467241-50467008 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 52-280 |
| Cow position: | chr6:60667519-60667293 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 91 |
| Conread position: | 52-322 |
| Cow position: | chr6:48282098-48281829 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 62, 88 |
| Conread position: | 57-319 |
| Cow position: | chr6:21456583-21456853 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 5 |
| Conread position: | 58-322 |
| Cow position: | chr6:46292248-46292504 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 61, 53 |
| Conread position: | 60-228 |
| Cow position: | chr6:67615332-67615505 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 59, 164 |
| Conread position: | 66-269 |
| Cow position: | chr6:11192372-11192583 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 48, 166 |
| Conread position: | 78-307 |
| Cow position: | chr6:49410617-49410840 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 40, 81 |
| Conread position: | 117-319 |
| Cow position: | chr6:62855097-62854895 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 54 |
Show alignments to all cow chromosomes.