Cow genome map
| Conread name: | Bra1-olf_111_B12 |
| Conread position: | 2-333 |
| Cow position: | chr1:43223752-43223440 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 34 |
| Conread position: | 28-258 |
| Cow position: | chr1:89096762-89096543 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 124 |
| Conread position: | 28-332 |
| Cow position: | chr1:19555234-19554942 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 121 |
| Conread position: | 28-333 |
| Cow position: | chr1:17133669-17133955 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 60, 14 |
| Conread position: | 29-189 |
| Cow position: | chr1:3266037-3266197 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 45 |
| Conread position: | 29-333 |
| Cow position: | chr1:44097217-44097525 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 30-182 |
| Cow position: | chr1:16389698-16389855 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 39 |
| Conread position: | 30-332 |
| Cow position: | chr1:579000-578713 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 12, 121 |
| Conread position: | 31-333 |
| Cow position: | chr1:27875728-27876008 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 269, 57 |
| Conread position: | 33-333 |
| Cow position: | chr1:91972708-91972424 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 117 |
| Conread position: | 36-260 |
| Cow position: | chr1:14305061-14305261 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 6, 22 |
| Conread position: | 36-332 |
| Cow position: | chr1:43584086-43584365 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 114 |
| Conread position: | 41-333 |
| Cow position: | chr1:51822611-51822340 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 47-169 |
| Cow position: | chr1:79839934-79839811 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 103 |
| Conread position: | 47-225 |
| Cow position: | chr1:57267319-57267144 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 47-227 |
| Cow position: | chr1:57084332-57084164 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 75 |
| Conread position: | 47-236 |
| Cow position: | chr1:81112812-81112633 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 103 |
| Conread position: | 48-333 |
| Cow position: | chr1:92045374-92045643 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 102 |
| Conread position: | 49-228 |
| Cow position: | chr1:84245905-84245735 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 101 |
| Conread position: | 50-225 |
| Cow position: | chr1:87757744-87757569 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 50-225 |
| Cow position: | chr1:88767690-88767865 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 50-227 |
| Cow position: | chr1:35434332-35434508 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 75 |
| Conread position: | 67-227 |
| Cow position: | chr1:95062821-95062971 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 21, 82 |
Show alignments to all cow chromosomes.