Cow genome map

Conread name: CorL-UMC-pd12cl-003-b08

Conread position: 3-187
Cow position: chr9:20579589-20579778 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 5-169
Cow position: chr9:44918277-44918448 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 6-174
Cow position: chr9:5358013-5357846 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 82, 21

Conread position: 9-153
Cow position: chr9:58368997-58369147 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 9-161
Cow position: chr9:60355213-60355362 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 86

Conread position: 9-170
Cow position: chr9:16216980-16216806 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 9-173
Cow position: chr9:28747521-28747692 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 9-173
Cow position: chr9:31359603-31359430 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 9-176
Cow position: chr9:35100888-35100731 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 9-177
Cow position: chr9:14738248-14738074 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 9-178
Cow position: chr9:59586310-59586136 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 89, 77

Conread position: 9-182
Cow position: chr9:34024698-34024517 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 82, 176

Conread position: 10-103
Cow position: chr9:52807406-52807500 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 10-107
Cow position: chr9:18131529-18131432 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 86

Conread position: 10-151
Cow position: chr9:55529797-55529651 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 17

Conread position: 10-152
Cow position: chr9:25400201-25400340 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 10-160
Cow position: chr9:22443629-22443784 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 10-163
Cow position: chr9:26394351-26394512 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 10-165
Cow position: chr9:39149077-39148916 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 10-165
Cow position: chr9:44625210-44625053 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 78, 39

Conread position: 10-165
Cow position: chr9:58611304-58611142 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 10-166
Cow position: chr9:4580406-4580551 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 10-168
Cow position: chr9:17872112-17872276 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 10-168
Cow position: chr9:34707314-34707479 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 32

Conread position: 10-168
Cow position: chr9:60395050-60395218 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 10-169
Cow position: chr9:12773688-12773524 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 10-169
Cow position: chr9:42586558-42586718 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 10-169
Cow position: chr9:44584591-44584431 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 83, 0

Conread position: 10-170
Cow position: chr9:19718342-19718505 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 78, 0

Conread position: 10-170
Cow position: chr9:34410398-34410564 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 10-170
Cow position: chr9:34902103-34902269 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 10-170
Cow position: chr9:42264212-42264050 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 96

Conread position: 10-170
Cow position: chr9:48809136-48808976 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 56

Conread position: 10-171
Cow position: chr9:11098454-11098623 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 10-171
Cow position: chr9:12337900-12337728 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 10-171
Cow position: chr9:25556970-25556811 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 10-171
Cow position: chr9:27347798-27347646 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 10-171
Cow position: chr9:35832621-35832786 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 72

Conread position: 10-171
Cow position: chr9:40984503-40984332 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 10-171
Cow position: chr9:52648859-52649018 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 10-171
Cow position: chr9:55256554-55256721 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 10-172
Cow position: chr9:19903080-19902918 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 156, 112

Conread position: 10-172
Cow position: chr9:20091044-20090887 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 10-172
Cow position: chr9:34917187-34917350 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 133
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 78, 0

Conread position: 10-172
Cow position: chr9:39011471-39011640 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 140

Conread position: 10-172
Cow position: chr9:41785208-41785048 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 10-172
Cow position: chr9:56453336-56453173 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 78, 63

Conread position: 10-172
Cow position: chr9:57642505-57642340 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 18, 131

Conread position: 10-173
Cow position: chr9:389017-389171 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 10-173
Cow position: chr9:24887204-24887031 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 10-173
Cow position: chr9:33101117-33101279 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 10-173
Cow position: chr9:34431818-34431665 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 10-173
Cow position: chr9:36623927-36624102 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 10-173
Cow position: chr9:62631673-62631841 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 10-173
Cow position: chr9:63784916-63785085 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 10-174
Cow position: chr9:3924441-3924280 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 10

Conread position: 10-174
Cow position: chr9:4256989-4257152 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 88, 98

Conread position: 10-174
Cow position: chr9:5433630-5433470 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 10-174
Cow position: chr9:16115610-16115781 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 10-174
Cow position: chr9:16121521-16121354 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 10-174
Cow position: chr9:17027195-17027021 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 58

Conread position: 10-174
Cow position: chr9:22803973-22804144 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 42, 20

Conread position: 10-174
Cow position: chr9:26279171-26279348 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 10-174
Cow position: chr9:26388206-26388041 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 118

Conread position: 10-174
Cow position: chr9:27077437-27077597 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 33

Conread position: 10-174
Cow position: chr9:28726726-28726904 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 10-174
Cow position: chr9:29819716-29819551 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 81, 50

Conread position: 10-174
Cow position: chr9:35295688-35295519 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 10-174
Cow position: chr9:36401667-36401835 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 10-174
Cow position: chr9:41644752-41644929 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 62

Conread position: 10-174
Cow position: chr9:47122474-47122304 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 105

Conread position: 10-174
Cow position: chr9:51720899-51721062 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 91, 0

Conread position: 10-174
Cow position: chr9:58662241-58662068 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 18

Conread position: 10-175
Cow position: chr9:4263092-4263264 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 54

Conread position: 10-175
Cow position: chr9:8723792-8723619 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 10-175
Cow position: chr9:26344970-26345138 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 10-175
Cow position: chr9:32773211-32773046 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 10-175
Cow position: chr9:37199125-37198951 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 10-175
Cow position: chr9:42497819-42497652 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 31

Conread position: 10-175
Cow position: chr9:63361721-63361887 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 10-176
Cow position: chr9:8992181-8992357 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 10-176
Cow position: chr9:13670631-13670458 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 10-176
Cow position: chr9:34362736-34362559 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 10-176
Cow position: chr9:41283013-41282834 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 10-177
Cow position: chr9:21292410-21292586 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 10-177
Cow position: chr9:24079300-24079127 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 10-177
Cow position: chr9:32052274-32052098 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 10-177
Cow position: chr9:35403581-35403401 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 10-177
Cow position: chr9:36457997-36457818 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 10-177
Cow position: chr9:38624626-38624804 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 78, 148

Conread position: 10-177
Cow position: chr9:39315849-39315685 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 144, 43

Conread position: 10-177
Cow position: chr9:48634902-48635062 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 10-179
Cow position: chr9:13742521-13742358 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 10-180
Cow position: chr9:5756990-5757158 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 68, 85

Conread position: 10-181
Cow position: chr9:9311856-9311677 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 10-182
Cow position: chr9:26403783-26403612 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 10-183
Cow position: chr9:36628116-36627939 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 161

Conread position: 10-184
Cow position: chr9:34283951-34283771 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 68

Conread position: 10-191
Cow position: chr9:7543261-7543447 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 140

Conread position: 10-191
Cow position: chr9:33584687-33584874 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 83, 164

Conread position: 10-192
Cow position: chr9:22152087-22152278 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 10-194
Cow position: chr9:6852069-6852245 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 10-196
Cow position: chr9:11161327-11161141 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 48

Conread position: 10-199
Cow position: chr9:5342250-5342448 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 13

Conread position: 11-132
Cow position: chr9:5836761-5836636 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 11-170
Cow position: chr9:61847127-61847286 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 131
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 11-171
Cow position: chr9:33347493-33347653 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 77, 89

Conread position: 11-172
Cow position: chr9:5032899-5033060 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 85

Conread position: 11-172
Cow position: chr9:5399132-5398981 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 11-173
Cow position: chr9:20712833-20712664 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 11-176
Cow position: chr9:9595955-9596128 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 11-177
Cow position: chr9:8967931-8967753 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 11-177
Cow position: chr9:34279056-34279238 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 11-177
Cow position: chr9:54681506-54681343 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 12-151
Cow position: chr9:34973716-34973852 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 14-166
Cow position: chr9:30123923-30123763 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 14-172
Cow position: chr9:53323790-53323960 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 14-174
Cow position: chr9:9495150-9494984 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 108

Conread position: 14-174
Cow position: chr9:18439178-18439330 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 14-175
Cow position: chr9:34666438-34666276 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 74, 106

Conread position: 14-177
Cow position: chr9:11299686-11299852 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 14-177
Cow position: chr9:12269024-12268857 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 48

Conread position: 14-177
Cow position: chr9:47928900-47928742 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 14-177
Cow position: chr9:51620439-51620266 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 14-177
Cow position: chr9:59897587-59897418 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 14-182
Cow position: chr9:14519386-14519560 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 15-138
Cow position: chr9:20319062-20319188 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 118

Conread position: 15-165
Cow position: chr9:11873311-11873461 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 126

Conread position: 15-165
Cow position: chr9:23970903-23971059 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 15-165
Cow position: chr9:55321630-55321488 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 15-170
Cow position: chr9:765990-765832 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 15-170
Cow position: chr9:8628924-8629083 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 15-170
Cow position: chr9:48016973-48016818 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 15-172
Cow position: chr9:3198194-3198353 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 11

Conread position: 15-172
Cow position: chr9:39654399-39654252 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 15-172
Cow position: chr9:58979394-58979232 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 91

Conread position: 15-173
Cow position: chr9:9516760-9516922 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 15-174
Cow position: chr9:5110851-5110680 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 15-174
Cow position: chr9:9459978-9459814 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 15-174
Cow position: chr9:20828899-20828728 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 137

Conread position: 15-174
Cow position: chr9:32812174-32812013 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 89

Conread position: 15-176
Cow position: chr9:21383955-21384118 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 99

Conread position: 15-177
Cow position: chr9:8636660-8636500 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 90, 83

Conread position: 15-177
Cow position: chr9:11168723-11168567 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 115

Conread position: 15-177
Cow position: chr9:22318342-22318183 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 15-177
Cow position: chr9:22440486-22440651 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 15-177
Cow position: chr9:30477782-30477950 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 77, 55

Conread position: 15-177
Cow position: chr9:40587053-40586893 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 41, 79

Conread position: 15-179
Cow position: chr9:3378747-3378582 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 15-180
Cow position: chr9:32732686-32732845 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 15-182
Cow position: chr9:2397800-2397627 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 15-183
Cow position: chr9:41679740-41679578 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 15-185
Cow position: chr9:7805968-7806139 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 85, 167

Conread position: 15-189
Cow position: chr9:33151735-33151559 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 15-198
Cow position: chr9:40507604-40507788 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 73, 146

Conread position: 16-170
Cow position: chr9:53762686-53762528 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 16-174
Cow position: chr9:9091113-9091284 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 16-174
Cow position: chr9:45141608-45141771 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 16-177
Cow position: chr9:40215239-40215068 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 16-177
Cow position: chr9:51891238-51891073 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 58

Conread position: 16-182
Cow position: chr9:35932822-35932996 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 103

Conread position: 17-153
Cow position: chr9:55287898-55288043 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 17-174
Cow position: chr9:7611801-7611963 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 11

Conread position: 17-183
Cow position: chr9:56065551-56065381 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 83, 24

Conread position: 18-173
Cow position: chr9:34286789-34286624 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 18-174
Cow position: chr9:1867441-1867296 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 18-174
Cow position: chr9:6189375-6189538 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 99

Conread position: 18-177
Cow position: chr9:8767426-8767592 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 13, 151

Conread position: 18-177
Cow position: chr9:47869006-47868846 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 19-166
Cow position: chr9:4630093-4629942 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 19-170
Cow position: chr9:60741195-60741355 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 46

Conread position: 20-169
Cow position: chr9:26493798-26493650 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 6, 74

Conread position: 21-182
Cow position: chr9:5327245-5327076 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 25-166
Cow position: chr9:64105882-64105736 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 25-174
Cow position: chr9:6192477-6192632 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 57

Conread position: 25-177
Cow position: chr9:44822341-44822501 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 25-177
Cow position: chr9:55284361-55284519 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 24

Conread position: 26-179
Cow position: chr9:4341177-4341335 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 156

Conread position: 26-182
Cow position: chr9:3789994-3789837 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 79, 9

Conread position: 27-172
Cow position: chr9:6237512-6237663 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 27-174
Cow position: chr9:54639838-54639993 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 15

Conread position: 27-177
Cow position: chr9:22447313-22447472 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 127

Conread position: 28-174
Cow position: chr9:1878022-1878173 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 89

Conread position: 28-177
Cow position: chr9:9403199-9403349 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 58, 117

Conread position: 28-192
Cow position: chr9:5500833-5500670 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 150, 65

Conread position: 30-171
Cow position: chr9:41646219-41646359 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 91, 63

Conread position: 30-173
Cow position: chr9:39135653-39135794 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 137, 67

Conread position: 30-177
Cow position: chr9:33247992-33248142 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 101

Conread position: 30-177
Cow position: chr9:55191407-55191261 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 85, 7

Conread position: 35-169
Cow position: chr9:53120966-53120834 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 35-170
Cow position: chr9:63713059-63712923 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 123

Conread position: 35-172
Cow position: chr9:47469252-47469111 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 47

Conread position: 35-175
Cow position: chr9:33032474-33032616 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 36-172
Cow position: chr9:43013469-43013334 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 59

Conread position: 37-172
Cow position: chr9:5393040-5392900 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 37-177
Cow position: chr9:22228401-22228540 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 37-180
Cow position: chr9:58734229-58734082 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 38-173
Cow position: chr9:3946178-3946320 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 37

Conread position: 41-198
Cow position: chr9:2719682-2719838 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 116

Conread position: 43-174
Cow position: chr9:3387671-3387541 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 66, 8

Conread position: 49-179
Cow position: chr9:55577667-55577532 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 133

Conread position: 50-177
Cow position: chr9:22114773-22114898 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 53-171
Cow position: chr9:60036574-60036455 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 53-173
Cow position: chr9:42608723-42608603 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 46

Show alignments to all cow chromosomes.