Cow genome map

Conread name: Emb1-C0005178_N04

Conread position: 1-116
Cow position: chr11:52983642-52983757 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-120
Cow position: chr11:34106703-34106584 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-125
Cow position: chr11:61130698-61130576 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 1-129
Cow position: chr11:42044025-42043902 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-129
Cow position: chr11:42359081-42359214 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 1-129
Cow position: chr11:58588313-58588439 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 1-132
Cow position: chr11:62155605-62155736 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-134
Cow position: chr11:1362501-1362367 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 126, 0

Conread position: 1-138
Cow position: chr11:33310940-33311082 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 1-138
Cow position: chr11:64868054-64867917 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-138
Cow position: chr11:81931145-81931012 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 126, 39

Conread position: 1-139
Cow position: chr11:33345412-33345551 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 1-139
Cow position: chr11:48063834-48063697 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 125, 0

Conread position: 1-139
Cow position: chr11:49934764-49934627 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 1-141
Cow position: chr11:29946947-29946805 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 130, 0

Conread position: 1-142
Cow position: chr11:71341498-71341356 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 126, 0

Conread position: 1-143
Cow position: chr11:62778411-62778551 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 127, 22

Conread position: 1-143
Cow position: chr11:63482459-63482321 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 1-144
Cow position: chr11:69415630-69415486 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 126, 46

Conread position: 1-147
Cow position: chr11:377675-377529 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-147
Cow position: chr11:4653006-4652859 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 126, 0

Conread position: 1-147
Cow position: chr11:28168456-28168311 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 106
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 127, 0

Conread position: 1-148
Cow position: chr11:23232549-23232405 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 75

Conread position: 1-151
Cow position: chr11:1071124-1070973 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 129, 0

Conread position: 1-152
Cow position: chr11:15373805-15373960 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 52, 106

Conread position: 1-152
Cow position: chr11:22747361-22747213 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 126, 30

Conread position: 1-152
Cow position: chr11:23138087-23137936 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 34

Conread position: 1-152
Cow position: chr11:28644054-28644208 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 126, 0

Conread position: 1-152
Cow position: chr11:59702453-59702610 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 1-152
Cow position: chr11:61958777-61958626 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 130, 109

Conread position: 1-152
Cow position: chr11:70825915-70826067 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 0

Conread position: 1-152
Cow position: chr11:76114613-76114761 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 126, 86

Conread position: 1-153
Cow position: chr11:62754352-62754200 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 131

Conread position: 1-154
Cow position: chr11:5249560-5249411 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 126, 47

Conread position: 1-158
Cow position: chr11:48512131-48512287 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 147, 44

Conread position: 1-163
Cow position: chr11:18608271-18608109 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-173
Cow position: chr11:32436301-32436476 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 127, 85

Conread position: 1-174
Cow position: chr11:59872897-59873062 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 46

Conread position: 1-181
Cow position: chr11:17493445-17493629 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 110

Conread position: 1-181
Cow position: chr11:58938778-58938597 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 158, 133

Conread position: 1-183
Cow position: chr11:34113231-34113410 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 44, 131

Conread position: 1-183
Cow position: chr11:63909697-63909507 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 131, 55

Conread position: 1-183
Cow position: chr11:84977392-84977217 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 127

Conread position: 1-186
Cow position: chr11:18587629-18587443 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 124, 154

Conread position: 1-186
Cow position: chr11:34136210-34136392 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 126, 30

Conread position: 1-194
Cow position: chr11:8545047-8544855 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 126, 10

Conread position: 1-198
Cow position: chr11:71868636-71868441 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 46

Conread position: 1-200
Cow position: chr11:85294205-85294411 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 6

Conread position: 1-203
Cow position: chr11:34144947-34144750 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 126, 42

Conread position: 1-203
Cow position: chr11:35926938-35926740 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 133, 46

Conread position: 1-203
Cow position: chr11:39855047-39854853 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 181, 46

Conread position: 1-203
Cow position: chr11:62663265-62663072 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 173, 45

Conread position: 1-204
Cow position: chr11:29659526-29659729 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 135, 125

Conread position: 1-204
Cow position: chr11:34692820-34693025 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 139
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 133, 195

Conread position: 1-205
Cow position: chr11:34467538-34467733 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 182, 13

Conread position: 1-205
Cow position: chr11:63202283-63202078 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 184

Conread position: 1-205
Cow position: chr11:73354093-73353896 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 194, 126

Conread position: 1-206
Cow position: chr11:36920611-36920406 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 31, 41

Conread position: 1-206
Cow position: chr11:48474670-48474881 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 128, 201

Conread position: 1-208
Cow position: chr11:24601931-24602132 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 201, 86

Conread position: 1-209
Cow position: chr11:13043179-13042973 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 182, 133

Conread position: 1-209
Cow position: chr11:22977907-22977707 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 109, 0

Conread position: 1-211
Cow position: chr11:29786532-29786316 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 125, 205

Conread position: 1-212
Cow position: chr11:8988263-8988052 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 182, 67

Conread position: 1-212
Cow position: chr11:70458007-70458222 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 5, 111

Conread position: 1-212
Cow position: chr11:82940651-82940452 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 1-212
Cow position: chr11:84385670-84385462 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 126, 39

Conread position: 1-213
Cow position: chr11:3896732-3896519 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 123, 46

Conread position: 1-213
Cow position: chr11:15382536-15382316 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 125, 203

Conread position: 1-213
Cow position: chr11:21885800-21886009 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 126, 74

Conread position: 1-213
Cow position: chr11:23407431-23407639 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 174, 130

Conread position: 1-213
Cow position: chr11:35352072-35351854 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 129, 46

Conread position: 1-213
Cow position: chr11:39060635-39060426 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 174, 90

Conread position: 1-213
Cow position: chr11:46747894-46747680 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 125, 0

Conread position: 1-213
Cow position: chr11:62812983-62812773 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 194, 133

Conread position: 1-213
Cow position: chr11:62889927-62889713 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 126, 197

Conread position: 1-213
Cow position: chr11:65826784-65826575 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 129, 155

Conread position: 1-213
Cow position: chr11:67312747-67312964 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 126, 189

Conread position: 1-213
Cow position: chr11:78381094-78380890 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 173, 46

Conread position: 1-214
Cow position: chr11:41313690-41313482 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 195, 125

Conread position: 1-214
Cow position: chr11:51729253-51729454 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 182, 133

Conread position: 1-214
Cow position: chr11:55761835-55762036 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 195, 114

Conread position: 1-215
Cow position: chr11:77319381-77319591 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 174, 133

Conread position: 1-218
Cow position: chr11:3739920-3740148 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 206

Conread position: 1-218
Cow position: chr11:16907082-16906847 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 126, 48

Conread position: 1-218
Cow position: chr11:19247232-19247021 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 177, 51

Conread position: 1-218
Cow position: chr11:53778583-53778804 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 129, 199

Conread position: 1-218
Cow position: chr11:71345357-71345131 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 125, 0

Conread position: 1-219
Cow position: chr11:6202409-6202641 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 93, 0

Conread position: 1-219
Cow position: chr11:6633677-6633911 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 126, 211

Conread position: 1-219
Cow position: chr11:17721835-17721616 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 174, 196

Conread position: 1-219
Cow position: chr11:43360810-43360602 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 182, 31

Conread position: 1-219
Cow position: chr11:46427441-46427222 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 109, 185

Conread position: 1-219
Cow position: chr11:50072904-50073140 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 130, 0

Conread position: 1-219
Cow position: chr11:64101742-64101958 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 124, 27

Conread position: 1-219
Cow position: chr11:65762623-65762400 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 107, 13

Conread position: 1-219
Cow position: chr11:70978767-70978550 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 182, 105

Conread position: 1-219
Cow position: chr11:77705725-77705937 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 126, 44

Conread position: 1-220
Cow position: chr11:76835658-76835432 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 125, 223

Conread position: 1-220
Cow position: chr11:80413048-80412821 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 41, 0

Conread position: 1-223
Cow position: chr11:41986079-41985859 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 194, 133

Conread position: 1-223
Cow position: chr11:84890750-84890538 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 192, 79

Conread position: 1-224
Cow position: chr11:9270758-9270548 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 174
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 0

Conread position: 1-224
Cow position: chr11:30808627-30808407 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 34

Conread position: 1-224
Cow position: chr11:37804587-37804361 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 126, 197

Conread position: 1-224
Cow position: chr11:66188350-66188131 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 114, 0

Conread position: 1-225
Cow position: chr11:19946402-19946612 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 105, 0

Conread position: 1-225
Cow position: chr11:32398605-32398833 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 137, 53

Conread position: 1-225
Cow position: chr11:64048370-64048581 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 130, 0

Conread position: 1-225
Cow position: chr11:82731031-82730793 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 126, 208

Conread position: 1-226
Cow position: chr11:49152916-49153131 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 126, 57

Conread position: 1-226
Cow position: chr11:58173592-58173827 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 126, 60

Conread position: 1-227
Cow position: chr11:41145-41364 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 48

Conread position: 1-227
Cow position: chr11:6194373-6194582 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 192, 13

Conread position: 1-227
Cow position: chr11:8584294-8584509 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 194, 83

Conread position: 1-227
Cow position: chr11:26067217-26066996 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 145

Conread position: 1-227
Cow position: chr11:42083439-42083646 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 195, 46

Conread position: 1-227
Cow position: chr11:47837287-47837514 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 126, 27

Conread position: 1-228
Cow position: chr11:17321614-17321861 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 70

Conread position: 1-228
Cow position: chr11:53717840-53717598 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 126, 184

Conread position: 1-229
Cow position: chr11:41549366-41549137 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 68, 26

Conread position: 1-230
Cow position: chr11:71492893-71492669 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 126, 46

Conread position: 1-231
Cow position: chr11:13940157-13940385 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 20

Conread position: 1-231
Cow position: chr11:20761814-20762049 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 129, 64

Conread position: 1-231
Cow position: chr11:28078470-28078685 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 191, 46

Conread position: 1-231
Cow position: chr11:36112390-36112606 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 1-231
Cow position: chr11:52690553-52690329 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 178, 56

Conread position: 1-231
Cow position: chr11:58927550-58927770 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 63

Conread position: 1-231
Cow position: chr11:62742676-62742450 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 174, 46

Conread position: 1-231
Cow position: chr11:72375716-72375467 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 84, 212

Conread position: 1-232
Cow position: chr11:13499984-13500207 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 28, 0

Conread position: 1-232
Cow position: chr11:15369354-15369588 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 147

Conread position: 1-232
Cow position: chr11:17278705-17278484 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 204, 46

Conread position: 1-232
Cow position: chr11:32260501-32260729 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 126, 28

Conread position: 1-232
Cow position: chr11:33348219-33348000 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 184
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 214, 7

Conread position: 1-232
Cow position: chr11:55333876-55334117 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 122, 155

Conread position: 1-232
Cow position: chr11:64104966-64105191 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 95, 16

Conread position: 1-232
Cow position: chr11:66939626-66939391 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 129, 146

Conread position: 1-232
Cow position: chr11:69977937-69978163 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 154
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 1-232
Cow position: chr11:70756449-70756671 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 182, 22

Conread position: 1-232
Cow position: chr11:81762829-81763067 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 95, 33

Conread position: 1-232
Cow position: chr11:83926016-83926235 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1-233
Cow position: chr11:6233913-6233679 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 133, 197

Conread position: 1-233
Cow position: chr11:19592026-19591797 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 125, 22

Conread position: 1-233
Cow position: chr11:46746598-46746835 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 67, 169

Conread position: 1-233
Cow position: chr11:48649939-48650185 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 130, 209

Conread position: 1-233
Cow position: chr11:62620343-62620575 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 178, 133

Conread position: 1-234
Cow position: chr11:1380642-1380877 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 126, 197

Conread position: 1-235
Cow position: chr11:29960265-29960491 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 125, 46

Conread position: 1-237
Cow position: chr11:37778864-37778615 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 34, 230

Conread position: 1-238
Cow position: chr11:62789097-62789329 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 174, 123

Conread position: 1-239
Cow position: chr11:897640-897870 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 174, 122

Conread position: 1-244
Cow position: chr11:32254250-32254004 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 182, 196

Conread position: 1-244
Cow position: chr11:77013751-77013983 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 194, 44

Conread position: 1-246
Cow position: chr11:27913251-27913497 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 146, 133

Conread position: 1-246
Cow position: chr11:63434091-63433851 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 192, 94

Conread position: 1-247
Cow position: chr11:39462590-39462831 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 182, 133

Conread position: 1-247
Cow position: chr11:67912184-67911939 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 126, 63

Conread position: 1-248
Cow position: chr11:63999121-63998875 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 130, 21

Conread position: 1-250
Cow position: chr11:30708473-30708719 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 125, 84

Conread position: 1-250
Cow position: chr11:69168552-69168807 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 1-252
Cow position: chr11:66326144-66325889 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 204

Conread position: 1-253
Cow position: chr11:30370076-30370322 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 182, 43

Conread position: 1-254
Cow position: chr11:11523492-11523231 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 61

Conread position: 1-255
Cow position: chr11:34646556-34646813 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 123, 201

Conread position: 1-255
Cow position: chr11:69417370-69417621 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 126, 43

Conread position: 1-258
Cow position: chr11:62811264-62811523 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 194, 90

Conread position: 1-262
Cow position: chr11:6245285-6245549 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 130, 43

Conread position: 1-265
Cow position: chr11:25791727-25791463 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 135, 25

Conread position: 1-290
Cow position: chr11:42066828-42067118 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 28, 122

Conread position: 1-307
Cow position: chr11:17831254-17830935 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 126, 39

Conread position: 1-308
Cow position: chr11:39249939-39250234 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 230, 98

Conread position: 1-311
Cow position: chr11:3714792-3715094 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 123, 31

Conread position: 2-143
Cow position: chr11:40478885-40478743 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 2-147
Cow position: chr11:79019091-79018945 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 0

Conread position: 2-149
Cow position: chr11:62168363-62168214 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 125, 108

Conread position: 2-150
Cow position: chr11:31885684-31885838 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 152

Conread position: 2-205
Cow position: chr11:42296652-42296456 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 2-211
Cow position: chr11:17227674-17227474 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 181, 45

Conread position: 2-213
Cow position: chr11:35669984-35669787 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 89, 0

Conread position: 2-214
Cow position: chr11:63920086-63919887 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 2-217
Cow position: chr11:30964314-30964526 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 12

Conread position: 2-219
Cow position: chr11:13040204-13040003 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 2-224
Cow position: chr11:83043395-83043177 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 173, 129

Conread position: 2-227
Cow position: chr11:30638982-30638758 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 193, 129

Conread position: 2-228
Cow position: chr11:34963038-34963262 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 124, 56

Conread position: 2-231
Cow position: chr11:48085886-48086116 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 57, 134

Conread position: 2-232
Cow position: chr11:4663079-4662865 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 2-232
Cow position: chr11:21507969-21508207 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 6, 204

Conread position: 2-247
Cow position: chr11:11125631-11125876 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 139, 178

Conread position: 2-251
Cow position: chr11:83032648-83032894 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 173, 132

Conread position: 3-123
Cow position: chr11:33527020-33527141 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 3-129
Cow position: chr11:16320255-16320378 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 3-143
Cow position: chr11:70278143-70278003 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 123, 12

Conread position: 3-143
Cow position: chr11:71501163-71501024 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 3-147
Cow position: chr11:3234044-3234189 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 3-152
Cow position: chr11:56290480-56290630 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 3-152
Cow position: chr11:82289551-82289697 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 128, 45

Conread position: 3-159
Cow position: chr11:5789931-5789774 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 3-166
Cow position: chr11:56654524-56654688 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 130

Conread position: 3-196
Cow position: chr11:75090250-75090056 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 3-198
Cow position: chr11:20602196-20602380 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 3-206
Cow position: chr11:21173465-21173265 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 124, 22

Conread position: 3-208
Cow position: chr11:35109569-35109366 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 64, 41

Conread position: 3-213
Cow position: chr11:48659903-48660109 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 179, 131

Conread position: 3-214
Cow position: chr11:63435490-63435702 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 168
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 124, 49

Conread position: 3-218
Cow position: chr11:71110860-71111082 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 124, 200

Conread position: 3-219
Cow position: chr11:18698848-18699055 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 192, 122

Conread position: 3-219
Cow position: chr11:65495367-65495159 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 180, 16

Conread position: 3-223
Cow position: chr11:64408945-64409154 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 180, 44

Conread position: 3-225
Cow position: chr11:7385408-7385626 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 179, 96

Conread position: 3-226
Cow position: chr11:8259044-8259268 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 58

Conread position: 3-226
Cow position: chr11:63382222-63382002 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 179, 124

Conread position: 3-227
Cow position: chr11:30493965-30494180 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 3-227
Cow position: chr11:40459076-40459297 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 110, 182

Conread position: 3-227
Cow position: chr11:49149008-49149241 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 134

Conread position: 3-227
Cow position: chr11:53510531-53510302 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 124, 49

Conread position: 3-230
Cow position: chr11:36520843-36521077 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 74, 158

Conread position: 3-231
Cow position: chr11:63866690-63866462 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 93, 25

Conread position: 3-231
Cow position: chr11:83397874-83398105 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 123, 194

Conread position: 3-232
Cow position: chr11:15772743-15772516 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 123, 44

Conread position: 3-232
Cow position: chr11:29308549-29308779 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 123, 195

Conread position: 3-232
Cow position: chr11:30172278-30172497 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 173, 42

Conread position: 3-232
Cow position: chr11:71021969-71022196 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 172, 123

Conread position: 3-236
Cow position: chr11:26144127-26143898 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 124, 181

Conread position: 3-246
Cow position: chr11:66572528-66572279 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 131, 45

Conread position: 3-247
Cow position: chr11:2084112-2084359 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 124, 146

Conread position: 3-248
Cow position: chr11:18509062-18508816 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 124, 214

Conread position: 3-307
Cow position: chr11:50472286-50472592 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 122, 23

Conread position: 4-129
Cow position: chr11:80761407-80761283 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 4-132
Cow position: chr11:64090127-64090000 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 4-152
Cow position: chr11:19606547-19606695 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 4-155
Cow position: chr11:54334298-54334450 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 4-159
Cow position: chr11:63917507-63917351 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 83

Conread position: 4-171
Cow position: chr11:2344220-2344388 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 124

Conread position: 4-205
Cow position: chr11:8525143-8524947 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 188, 64

Conread position: 4-206
Cow position: chr11:71707786-71707976 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 123, 76

Conread position: 4-208
Cow position: chr11:70483882-70483677 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 128, 143

Conread position: 4-212
Cow position: chr11:40608624-40608415 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 126, 54

Conread position: 4-213
Cow position: chr11:4199241-4199453 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 126, 54

Conread position: 4-213
Cow position: chr11:30830644-30830444 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 130, 0

Conread position: 4-214
Cow position: chr11:17036558-17036352 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 171, 122

Conread position: 4-214
Cow position: chr11:42160084-42159882 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 171, 42

Conread position: 4-215
Cow position: chr11:70250884-70251095 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 127

Conread position: 4-218
Cow position: chr11:49872915-49872703 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 171, 42

Conread position: 4-218
Cow position: chr11:50152844-50152629 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 182, 171

Conread position: 4-219
Cow position: chr11:8437724-8437505 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 120, 177

Conread position: 4-219
Cow position: chr11:32693509-32693309 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 4-219
Cow position: chr11:41438217-41437999 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 122, 194

Conread position: 4-219
Cow position: chr11:70206290-70206500 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 179, 77

Conread position: 4-220
Cow position: chr11:18447522-18447315 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 175, 123

Conread position: 4-222
Cow position: chr11:17083340-17083125 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 171, 136

Conread position: 4-224
Cow position: chr11:259202-258983 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 179, 120

Conread position: 4-224
Cow position: chr11:58594418-58594196 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 125, 194

Conread position: 4-224
Cow position: chr11:77745282-77745058 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 105, 149

Conread position: 4-225
Cow position: chr11:36940626-36940404 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 122, 144

Conread position: 4-225
Cow position: chr11:66041254-66041462 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 192, 22

Conread position: 4-225
Cow position: chr11:81138179-81138403 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 71

Conread position: 4-226
Cow position: chr11:34616228-34616452 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 145

Conread position: 4-226
Cow position: chr11:34968644-34968422 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 124, 76

Conread position: 4-226
Cow position: chr11:48672684-48672905 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 122, 36

Conread position: 4-226
Cow position: chr11:59024390-59024162 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 123, 70

Conread position: 4-227
Cow position: chr11:1067470-1067247 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 123, 194

Conread position: 4-227
Cow position: chr11:3715207-3715432 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 175

Conread position: 4-227
Cow position: chr11:67614952-67614732 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 171, 122

Conread position: 4-227
Cow position: chr11:70950840-70951059 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 179, 136

Conread position: 4-228
Cow position: chr11:87155490-87155709 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 126, 40

Conread position: 4-229
Cow position: chr11:52297250-52297026 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 179, 11

Conread position: 4-229
Cow position: chr11:52380902-52380677 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 123, 142

Conread position: 4-231
Cow position: chr11:41213012-41213246 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 152

Conread position: 4-231
Cow position: chr11:55636256-55636028 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 152
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 122, 80

Conread position: 4-232
Cow position: chr11:7460645-7460433 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 142, 0

Conread position: 4-232
Cow position: chr11:16314842-16315071 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 126, 194

Conread position: 4-232
Cow position: chr11:35768855-35769085 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 118, 194

Conread position: 4-232
Cow position: chr11:36914597-36914368 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 122, 194

Conread position: 4-232
Cow position: chr11:40794382-40794150 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 105

Conread position: 4-232
Cow position: chr11:55744437-55744667 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 123, 194

Conread position: 4-232
Cow position: chr11:62239715-62239939 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 192, 11

Conread position: 4-232
Cow position: chr11:63975099-63975332 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 125, 144

Conread position: 4-232
Cow position: chr11:80893752-80893979 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 125, 43

Conread position: 4-232
Cow position: chr11:81300651-81300423 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 126, 105

Conread position: 4-232
Cow position: chr11:85571835-85571607 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 123, 15

Conread position: 4-233
Cow position: chr11:30895034-30894803 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 191, 0

Conread position: 4-233
Cow position: chr11:76652989-76653222 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 194

Conread position: 4-234
Cow position: chr11:33286987-33286756 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 122, 144

Conread position: 4-234
Cow position: chr11:38236221-38236445 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 125, 168

Conread position: 4-235
Cow position: chr11:48296003-48296230 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 215, 43

Conread position: 4-238
Cow position: chr11:2788363-2788604 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 144

Conread position: 4-238
Cow position: chr11:35213198-35212969 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 175, 130

Conread position: 4-240
Cow position: chr11:32595427-32595666 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 144

Conread position: 4-247
Cow position: chr11:27746893-27747131 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 171, 119

Conread position: 4-248
Cow position: chr11:35923824-35924069 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 122, 194

Conread position: 4-248
Cow position: chr11:71854309-71854068 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 179, 87

Conread position: 4-251
Cow position: chr11:23272032-23271789 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 179, 44

Conread position: 4-254
Cow position: chr11:38783-39038 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 31

Conread position: 4-262
Cow position: chr11:27248463-27248719 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 179, 42

Conread position: 4-267
Cow position: chr11:27343240-27343507 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 125, 144

Conread position: 5-130
Cow position: chr11:30355029-30355154 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-157
Cow position: chr11:44636783-44636631 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-203
Cow position: chr11:44016945-44017153 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 127, 201

Conread position: 5-206
Cow position: chr11:29677173-29677379 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 146

Conread position: 5-213
Cow position: chr11:45435050-45435254 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 149

Conread position: 5-218
Cow position: chr11:13592706-13592923 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 125, 195

Conread position: 5-218
Cow position: chr11:53816828-53817038 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 121, 30

Conread position: 5-231
Cow position: chr11:17638564-17638322 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 125, 208

Conread position: 5-231
Cow position: chr11:30165481-30165707 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 133, 19

Conread position: 5-232
Cow position: chr11:14649343-14649113 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 194

Conread position: 5-232
Cow position: chr11:48776346-48776115 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 67, 145

Conread position: 5-232
Cow position: chr11:55052842-55053059 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 129, 0

Conread position: 5-234
Cow position: chr11:33414207-33414426 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 101

Conread position: 6-123
Cow position: chr11:36986921-36987038 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-135
Cow position: chr11:73512471-73512342 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 121, 114

Conread position: 6-152
Cow position: chr11:48272172-48272319 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 6-152
Cow position: chr11:83579204-83579060 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 6-198
Cow position: chr11:9698874-9699052 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 181, 41

Conread position: 6-205
Cow position: chr11:28993765-28993577 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 177, 8

Conread position: 6-211
Cow position: chr11:5201680-5201469 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 128, 115

Conread position: 6-212
Cow position: chr11:30843047-30842847 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 180, 114

Conread position: 6-213
Cow position: chr11:33409290-33409087 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 169, 121

Conread position: 6-218
Cow position: chr11:7559971-7560185 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 6-219
Cow position: chr11:4637200-4636990 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 188, 114

Conread position: 6-219
Cow position: chr11:44222861-44223066 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 190, 41

Conread position: 6-220
Cow position: chr11:30209848-30209637 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 125, 50

Conread position: 6-224
Cow position: chr11:2900749-2900523 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 116, 198

Conread position: 6-233
Cow position: chr11:80639578-80639353 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 131

Conread position: 6-255
Cow position: chr11:43914263-43914513 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 120, 192

Conread position: 7-213
Cow position: chr11:20205879-20205679 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 166, 124

Conread position: 7-225
Cow position: chr11:45350539-45350320 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 120, 141

Conread position: 8-208
Cow position: chr11:60486446-60486242 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 8, 192

Conread position: 8-218
Cow position: chr11:73984029-73983806 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 6

Conread position: 8-219
Cow position: chr11:63165673-63165466 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 167, 126

Conread position: 8-226
Cow position: chr11:35536561-35536767 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 8-227
Cow position: chr11:38211618-38211835 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 5, 120

Conread position: 8-252
Cow position: chr11:17676399-17676158 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 167, 126

Conread position: 9-213
Cow position: chr11:41215707-41215912 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 117, 188

Conread position: 9-214
Cow position: chr11:32782909-32782694 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 122, 197

Conread position: 9-223
Cow position: chr11:67600759-67600966 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 174, 113

Conread position: 9-228
Cow position: chr11:40792732-40792501 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 197

Conread position: 9-245
Cow position: chr11:78820126-78820357 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 186, 52

Conread position: 10-196
Cow position: chr11:31875068-31875257 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 10-218
Cow position: chr11:1932516-1932304 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 190

Conread position: 10-218
Cow position: chr11:56288521-56288729 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 116, 43

Conread position: 10-219
Cow position: chr11:79466187-79466407 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 118, 197

Conread position: 10-231
Cow position: chr11:47784750-47784976 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 117, 192

Conread position: 11-214
Cow position: chr11:67183623-67183834 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 135

Conread position: 12-139
Cow position: chr11:30210882-30211010 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 13-143
Cow position: chr11:30805152-30805025 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 113, 10

Conread position: 13-168
Cow position: chr11:15683001-15682850 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 13-213
Cow position: chr11:42084697-42084494 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 117, 135

Conread position: 13-227
Cow position: chr11:77241685-77241894 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 114, 21

Conread position: 13-234
Cow position: chr11:17517377-17517597 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 117, 168

Conread position: 14-139
Cow position: chr11:84775054-84775179 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 96

Conread position: 14-151
Cow position: chr11:60470212-60470081 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 113, 15

Conread position: 14-181
Cow position: chr11:8684100-8683932 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 0

Conread position: 14-224
Cow position: chr11:49207691-49207901 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 119, 8

Conread position: 14-230
Cow position: chr11:38334503-38334716 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 160, 136

Conread position: 14-232
Cow position: chr11:30475972-30476192 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 126

Conread position: 14-286
Cow position: chr11:46884353-46884621 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 113, 184

Conread position: 14-301
Cow position: chr11:56114918-56115207 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 200
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 115

Conread position: 15-230
Cow position: chr11:31227943-31228149 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 112, 0

Conread position: 15-246
Cow position: chr11:35153843-35153610 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 107, 188

Conread position: 16-205
Cow position: chr11:35149380-35149573 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 83

Conread position: 16-230
Cow position: chr11:66099881-66099662 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 111, 186

Conread position: 17-197
Cow position: chr11:18792085-18791899 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 55, 0

Conread position: 17-232
Cow position: chr11:12555323-12555106 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 109, 180

Conread position: 18-213
Cow position: chr11:21830226-21830032 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 106, 127

Conread position: 18-226
Cow position: chr11:41123617-41123406 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 47, 135

Conread position: 18-232
Cow position: chr11:25968867-25968656 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 113, 38

Conread position: 18-232
Cow position: chr11:41576884-41576675 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 111, 29

Conread position: 18-234
Cow position: chr11:9699261-9699050 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 170, 109

Conread position: 19-181
Cow position: chr11:35139892-35140056 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 130

Conread position: 19-218
Cow position: chr11:47110238-47110440 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 112, 5

Conread position: 19-231
Cow position: chr11:48315412-48315201 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 107, 132

Conread position: 20-183
Cow position: chr11:41983181-41983010 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 109, 116

Conread position: 20-258
Cow position: chr11:42016653-42016414 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 108, 33

Conread position: 20-307
Cow position: chr11:65843088-65842794 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 194
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 106, 53

Conread position: 21-226
Cow position: chr11:64781073-64781279 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 102, 177

Conread position: 21-228
Cow position: chr11:47411828-47412036 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 112, 19

Conread position: 21-250
Cow position: chr11:6094416-6094192 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 113, 102

Conread position: 22-153
Cow position: chr11:16796214-16796347 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 91, 8

Conread position: 23-166
Cow position: chr11:74720713-74720856 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 131, 139

Conread position: 23-213
Cow position: chr11:37100182-37099993 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 109, 24

Conread position: 23-213
Cow position: chr11:87172088-87171897 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 113, 102

Conread position: 23-225
Cow position: chr11:60296719-60296929 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 104, 35

Conread position: 23-231
Cow position: chr11:19577930-19578131 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 21

Conread position: 23-232
Cow position: chr11:25603936-25604152 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 103, 179

Conread position: 23-232
Cow position: chr11:77758772-77758564 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 168, 138

Conread position: 23-233
Cow position: chr11:48232816-48233036 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 107, 166

Conread position: 23-237
Cow position: chr11:15366984-15366774 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 160, 108

Conread position: 23-264
Cow position: chr11:12079825-12080074 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 117, 180

Conread position: 24-214
Cow position: chr11:17074229-17074048 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 169, 23

Conread position: 24-219
Cow position: chr11:41980215-41980020 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 103, 162

Conread position: 24-236
Cow position: chr11:19549474-19549676 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 24-260
Cow position: chr11:48429100-48429340 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 108

Conread position: 25-151
Cow position: chr11:46452126-46452253 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 25-213
Cow position: chr11:44032002-44032185 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 170, 98

Conread position: 25-224
Cow position: chr11:9836466-9836265 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 102, 0

Conread position: 25-229
Cow position: chr11:15017047-15017254 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 97, 123

Conread position: 27-174
Cow position: chr11:61178350-61178491 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 27-223
Cow position: chr11:80586267-80586455 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 156, 100

Conread position: 28-229
Cow position: chr11:62456266-62456066 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 51

Conread position: 28-246
Cow position: chr11:36182684-36182900 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 26, 121

Conread position: 28-248
Cow position: chr11:7571618-7571839 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 155, 99

Conread position: 29-213
Cow position: chr11:76248044-76248225 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 31-230
Cow position: chr11:30192175-30192371 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 100, 146

Conread position: 31-248
Cow position: chr11:6320136-6319917 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 96, 167

Conread position: 31-279
Cow position: chr11:23220359-23220605 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 152, 117

Conread position: 32-206
Cow position: chr11:60720458-60720282 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 95, 0

Conread position: 32-218
Cow position: chr11:63499129-63498947 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 151, 22

Conread position: 32-232
Cow position: chr11:42206419-42206612 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 102, 0

Conread position: 32-232
Cow position: chr11:46499006-46499189 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 10, 97

Conread position: 33-143
Cow position: chr11:59916144-59916255 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 33-201
Cow position: chr11:83066486-83066659 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 167

Conread position: 33-205
Cow position: chr11:2835857-2836031 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 33-212
Cow position: chr11:26535786-26535962 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 62, 15

Conread position: 33-214
Cow position: chr11:63484936-63485112 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 150
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 150, 98

Conread position: 33-214
Cow position: chr11:64023101-64022930 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 145, 41

Conread position: 33-218
Cow position: chr11:30322494-30322310 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 97, 113

Conread position: 33-218
Cow position: chr11:79666263-79666078 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 114

Conread position: 33-219
Cow position: chr11:29482437-29482256 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 94, 155

Conread position: 33-228
Cow position: chr11:1485228-1485041 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 99

Conread position: 33-231
Cow position: chr11:36361646-36361444 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 33-232
Cow position: chr11:49210823-49210619 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 98, 86

Conread position: 33-232
Cow position: chr11:57767189-57767387 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 150, 22

Conread position: 34-206
Cow position: chr11:84228718-84228551 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 161, 98

Conread position: 34-219
Cow position: chr11:58102761-58102572 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 93, 41

Conread position: 34-219
Cow position: chr11:85186528-85186343 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 93, 108

Conread position: 34-224
Cow position: chr11:79548938-79548743 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 148, 0

Conread position: 34-231
Cow position: chr11:80008068-80007863 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 65

Conread position: 34-232
Cow position: chr11:80370114-80370310 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 99, 24

Conread position: 34-236
Cow position: chr11:36092917-36092719 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 94

Conread position: 34-307
Cow position: chr11:58185882-58186145 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 149, 94

Conread position: 35-227
Cow position: chr11:71455823-71456023 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 95, 13

Conread position: 35-232
Cow position: chr11:25721993-25721808 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 35-235
Cow position: chr11:23278963-23278762 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 96, 13

Conread position: 36-143
Cow position: chr11:35860584-35860690 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 36-227
Cow position: chr11:41278187-41278380 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 94, 112

Conread position: 36-231
Cow position: chr11:44619956-44620149 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 148

Conread position: 36-231
Cow position: chr11:49057391-49057579 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 97

Conread position: 36-236
Cow position: chr11:8520825-8521015 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 195, 95

Conread position: 37-226
Cow position: chr11:75749482-75749656 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 37-229
Cow position: chr11:15339066-15339250 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 53

Conread position: 38-226
Cow position: chr11:35924064-35924253 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 111

Conread position: 40-225
Cow position: chr11:74152749-74152557 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 40-232
Cow position: chr11:63849946-63849753 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 158

Conread position: 40-268
Cow position: chr11:70600823-70600592 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 176

Conread position: 41-236
Cow position: chr11:19148130-19147941 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 154, 62

Conread position: 42-232
Cow position: chr11:60493730-60493548 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 120

Conread position: 43-206
Cow position: chr11:68909846-68909681 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 108, 91

Conread position: 48-182
Cow position: chr11:37173053-37173192 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 48-197
Cow position: chr11:72401719-72401571 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 135, 79

Conread position: 48-204
Cow position: chr11:55117458-55117613 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 82, 136

Conread position: 48-209
Cow position: chr11:80296839-80296684 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 80

Conread position: 48-219
Cow position: chr11:30485665-30485842 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 154

Conread position: 48-225
Cow position: chr11:26057637-26057457 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 79, 170

Conread position: 48-226
Cow position: chr11:40818613-40818441 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 127, 93

Conread position: 48-227
Cow position: chr11:4411855-4411680 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 127, 84

Conread position: 48-230
Cow position: chr11:37041985-37042171 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 48-231
Cow position: chr11:68570367-68570186 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 87, 99

Conread position: 48-232
Cow position: chr11:35733070-35732886 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 83, 99

Conread position: 48-232
Cow position: chr11:38223774-38223596 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 148, 51

Conread position: 48-235
Cow position: chr11:74839624-74839801 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 48-240
Cow position: chr11:75388361-75388169 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 88

Conread position: 48-284
Cow position: chr11:7652053-7651820 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 79, 136

Conread position: 49-183
Cow position: chr11:27688376-27688243 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 49-183
Cow position: chr11:37490562-37490429 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 49-215
Cow position: chr11:21468709-21468864 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 78, 0

Conread position: 49-232
Cow position: chr11:15591460-15591282 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 126, 77

Conread position: 49-232
Cow position: chr11:15999672-15999855 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 135, 86

Conread position: 49-232
Cow position: chr11:37564888-37565067 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 134, 85

Conread position: 49-236
Cow position: chr11:33369165-33369352 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 101, 75

Conread position: 49-248
Cow position: chr11:49486793-49487003 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 81, 170

Conread position: 49-257
Cow position: chr11:18777584-18777373 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 78, 9

Conread position: 52-212
Cow position: chr11:63475655-63475493 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 146

Conread position: 52-232
Cow position: chr11:3175691-3175866 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 53-190
Cow position: chr11:62081949-62081815 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 130, 78

Conread position: 53-213
Cow position: chr11:8422099-8421946 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 88

Conread position: 53-219
Cow position: chr11:81175615-81175783 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 145

Conread position: 53-226
Cow position: chr11:76896356-76896182 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 145

Conread position: 53-229
Cow position: chr11:18210155-18209988 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 139, 71

Conread position: 53-230
Cow position: chr11:82733131-82732954 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 129, 81

Conread position: 53-241
Cow position: chr11:44859268-44859077 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 131, 81

Conread position: 54-219
Cow position: chr11:71191990-71192157 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 100, 144

Conread position: 55-218
Cow position: chr11:67208273-67208433 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 75, 96

Conread position: 55-249
Cow position: chr11:80923303-80923108 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 171, 120

Conread position: 57-230
Cow position: chr11:44176618-44176789 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 69, 90

Conread position: 59-232
Cow position: chr11:62102423-62102248 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 68, 139

Conread position: 61-212
Cow position: chr11:64096639-64096489 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 115

Conread position: 66-219
Cow position: chr11:34279774-34279921 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 61, 74

Conread position: 66-250
Cow position: chr11:51683247-51683432 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 81

Conread position: 68-233
Cow position: chr11:17369564-17369723 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 115, 63

Conread position: 68-251
Cow position: chr11:2937630-2937459 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 115, 59

Conread position: 69-232
Cow position: chr11:24551425-24551589 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 18

Conread position: 69-250
Cow position: chr11:31994112-31994290 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 164, 76

Conread position: 71-227
Cow position: chr11:7928710-7928870 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 112

Conread position: 72-218
Cow position: chr11:2830694-2830840 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 123, 62

Conread position: 76-219
Cow position: chr11:86925918-86925779 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 7

Conread position: 80-230
Cow position: chr11:32587078-32586930 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 54

Conread position: 83-224
Cow position: chr11:53512171-53512317 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 83-232
Cow position: chr11:31525602-31525460 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 44, 19

Show alignments to all cow chromosomes.