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Cow genome map

           
Conread name:
           
Emb1-C0005178_N04
        

               
Conread position:
               
1-121
               

               
Cow position:
               
chr14:25403877-25403997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-125
               

               
Cow position:
               
chr14:25399129-25399003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr14:23478881-23478758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr14:35018695-35018822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-129
               

               
Cow position:
               
chr14:17841234-17841361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr14:2038750-2038884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr14:1868325-1868464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr14:3943492-3943632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr14:34399740-34399881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr14:34448913-34449054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr14:4991060-4990919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr14:19129564-19129421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr14:46998097-46997954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr14:49021842-49021982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr14:15039556-15039697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr14:12035465-12035319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr14:16457575-16457426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr14:18763380-18763526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr14:26097635-26097787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr14:30431510-30431660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr14:33309445-33309596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr14:33830359-33830208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
126, 55
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr14:42437081-42436931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr14:15054933-15055087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr14:33300761-33300585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
127, 52
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr14:37447409-37447588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr14:12520244-12520429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
125, 149
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr14:27077035-27076841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr14:16749627-16749833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr14:24712566-24712773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
94, 201
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr14:12127352-12127539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
182, 123
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr14:8101848-8101654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
194, 55
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr14:26941157-26941364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 150
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr14:40165482-40165286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr14:18350799-18351012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
128, 204
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr14:37902051-37901855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
182, 61
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr14:25824753-25824554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:7695325-7695115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr14:33247371-33247569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
182, 130
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr14:19594079-19594286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
194, 140
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr14:50362852-50362641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
130, 196
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr14:12141847-12142068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 128
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr14:28115129-28115343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
80, 91
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr14:35503420-35503211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 132
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:10078326-10078101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
126, 186
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:10609738-10609526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
130, 147
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:11729052-11729260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
123, 132
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:12081076-12081279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
182, 83
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr14:24981513-24981300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 52
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr14:18309249-18309454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
182, 130
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr14:25002093-25001878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr14:42419215-42419436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 181
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:28924226-28924006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
126, 147
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:1796247-1796037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:5222233-5222445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
181, 90
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:12954327-12954534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
194, 105
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:14466405-14466619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
126, 43
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:21535248-21535462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
182, 133
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:21933285-21933503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
130, 146
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:22941670-22941899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
126, 203
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:41302772-41303002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
115, 207
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:42330413-42330187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:45677287-45677072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
104, 27
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:49488018-49487805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr14:20466988-20466775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
126, 31
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr14:35381648-35381424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
150, 59
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr14:48740811-48741031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
51, 59
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr14:4227163-4227388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 196
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr14:27823490-27823267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr14:2975035-2975254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr14:7198556-7198328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
129, 147
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr14:24387505-24387287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 140
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr14:24236883-24236655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
75, 197
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr14:19618693-19618914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
130, 109
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr14:21357613-21357387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
182, 55
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr14:10693199-10693428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
126, 45
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr14:41966302-41966052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 213
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:4848405-4848177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
126, 35
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:11470093-11470321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
128, 39
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:13731040-13731267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:18485195-18485426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
5, 68
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:20110664-20110893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
174, 133
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:24922157-24921927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
5, 54
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:31130319-31130548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
132, 22
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:36289743-36289963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 46
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:40191643-40191430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:47672827-47673049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
174, 26
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:48900232-48899995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
130, 44
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr14:49941066-49940841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
189, 18
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr14:6541666-6541899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
98, 147
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr14:16524531-16524296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
79, 152
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr14:48496089-48496320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
126, 24
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:23443078-23442848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
182, 53
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr14:40754189-40754420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
182, 124
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr14:23424317-23424087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
182, 53
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr14:43192897-43192687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:4282451-4282690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
126, 55
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr14:38144049-38144296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
126, 197
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr14:8786492-8786720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
182, 55
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr14:5958929-5959175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
141, 200
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr14:11577126-11576884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
182, 83
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr14:16237454-16237698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
111, 137
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr14:22916233-22916484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr14:22997519-22997783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 112
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr14:24527104-24527350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
125, 145
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr14:37103269-37103019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 198
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr14:27998978-27999240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
149, 19
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr14:25225786-25225514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
254, 133
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr14:35420706-35420990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
182, 123
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr14:12033183-12033485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
131, 64
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr14:12511843-12512138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
182, 44
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr14:38285913-38286144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
2-231
               

               
Cow position:
               
chr14:27733659-27733436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
181, 94
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr14:26919054-26918820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
136, 45
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr14:34331269-34331520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
129, 213
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr14:10858492-10858269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 120
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr14:28378415-28378206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
123, 145
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr14:23078736-23078945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
184, 128
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr14:36425355-36425557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
180, 20
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr14:11056677-11056892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
133, 43
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr14:36442962-36443176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
180, 120
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr14:40208954-40208741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
75, 126
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr14:50589344-50589557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
41, 106
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr14:8923528-8923755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
123, 195
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr14:47511014-47510799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
213, 20
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr14:36559170-36559398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
124, 143
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr14:7036301-7036533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
124, 195
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr14:1868737-1868964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 129
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr14:20954740-20954462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
132, 144
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr14:37883860-37884157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
128, 197
               

               
Conread position:
               
4-137
               

               
Cow position:
               
chr14:19863378-19863513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
4-191
               

               
Cow position:
               
chr14:42423146-42422958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr14:26433187-26433394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
114, 198
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr14:18302016-18301804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
92, 177
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr14:34775691-34775902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
126, 144
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr14:5630217-5630014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
191, 120
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr14:25228196-25227993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
163, 24
               

               
Conread position:
               
4-216
               

               
Cow position:
               
chr14:48427126-48426916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
178, 42
               

               
Conread position:
               
4-218
               

               
Cow position:
               
chr14:28304727-28304945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 105
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr14:24945436-24945653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
96, 175
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr14:25986571-25986353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
68, 106
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr14:28694661-28694877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
122, 194
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr14:48838650-48838426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
126, 195
               

               
Conread position:
               
4-226
               

               
Cow position:
               
chr14:6865055-6864833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
121, 146
               

               
Conread position:
               
4-226
               

               
Cow position:
               
chr14:14622123-14622334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
191, 43
               

               
Conread position:
               
4-226
               

               
Cow position:
               
chr14:14812165-14812388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 194
               

               
Conread position:
               
4-226
               

               
Cow position:
               
chr14:36437431-36437654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
125, 212
               

               
Conread position:
               
4-226
               

               
Cow position:
               
chr14:39415216-39414993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
122, 144
               

               
Conread position:
               
4-230
               

               
Cow position:
               
chr14:11043436-11043664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
118, 194
               

               
Conread position:
               
4-231
               

               
Cow position:
               
chr14:20501032-20500804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
179, 193
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr14:9308120-9307897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr14:12146425-12146653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 142
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr14:12244329-12244552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 131
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr14:16549948-16550166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
113, 139
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr14:20016652-20016881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
123, 194
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr14:27885073-27884844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
122, 147
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr14:33546301-33546531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
122, 147
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr14:35065744-35065515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
122, 144
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr14:36254641-36254861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
179, 123
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr14:45955336-45955117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
129, 53
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr14:48884779-48884999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 78
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr14:11285631-11285396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
123, 19
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr14:41210910-41210692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
53, 64
               

               
Conread position:
               
4-234
               

               
Cow position:
               
chr14:13846040-13845818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
222, 111
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr14:20234138-20234371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
122, 142
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr14:23419853-23419617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr14:12342783-12343022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
122, 149
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr14:13385423-13385182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
179, 193
               

               
Conread position:
               
4-248
               

               
Cow position:
               
chr14:20984393-20984147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
122, 90
               

               
Conread position:
               
4-251
               

               
Cow position:
               
chr14:26825246-26824996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
125, 194
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr14:1431777-1432025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
228, 43
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr14:20576894-20577156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
122, 42
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr14:29734309-29734597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr14:45312846-45312645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
124, 48
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr14:26655080-26655290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 193
               

               
Conread position:
               
5-214
               

               
Cow position:
               
chr14:20481789-20482006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
122, 62
               

               
Conread position:
               
5-214
               

               
Cow position:
               
chr14:25903585-25903378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 146
               

               
Conread position:
               
5-219
               

               
Cow position:
               
chr14:6735809-6736027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
5-230
               

               
Cow position:
               
chr14:10706929-10706707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
170, 32
               

               
Conread position:
               
5-231
               

               
Cow position:
               
chr14:20640576-20640800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
170, 39
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr14:6599903-6600123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
122, 107
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr14:26116115-26115888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
132, 48
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr14:33456989-33457216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
125, 145
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr14:4203044-4203271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
179, 126
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr14:44084435-44084660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
178, 122
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr14:1708602-1708850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
123, 192
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr14:437418-437682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
121, 143
               

               
Conread position:
               
6-129
               

               
Cow position:
               
chr14:21406657-21406780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-231
               

               
Cow position:
               
chr14:7636442-7636671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
6-232
               

               
Cow position:
               
chr14:27364631-27364406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr14:44713471-44713245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
123, 141
               

               
Conread position:
               
8-232
               

               
Cow position:
               
chr14:20245118-20245338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
175, 126
               

               
Conread position:
               
8-232
               

               
Cow position:
               
chr14:23682314-23682093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 111
               

               
Conread position:
               
8-237
               

               
Cow position:
               
chr14:42154921-42155144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 61
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr14:44615098-44615323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 139
               

               
Conread position:
               
10-152
               

               
Cow position:
               
chr14:15491205-15491067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
10-224
               

               
Cow position:
               
chr14:15211975-15211770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
173, 58
               

               
Conread position:
               
10-231
               

               
Cow position:
               
chr14:18559012-18559228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
180, 100
               

               
Conread position:
               
14-218
               

               
Cow position:
               
chr14:20914932-20915139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
99, 185
               

               
Conread position:
               
14-228
               

               
Cow position:
               
chr14:21556981-21557192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
115, 85
               

               
Conread position:
               
14-231
               

               
Cow position:
               
chr14:33329005-33328796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 114
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr14:35421039-35421259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 24
               

               
Conread position:
               
16-129
               

               
Cow position:
               
chr14:3173694-3173807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-195
               

               
Cow position:
               
chr14:38673879-38674067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
119, 10
               

               
Conread position:
               
17-209
               

               
Cow position:
               
chr14:40347604-40347791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
18-147
               

               
Cow position:
               
chr14:26456414-26456282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
18-212
               

               
Cow position:
               
chr14:8707590-8707404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
177, 28
               

               
Conread position:
               
18-232
               

               
Cow position:
               
chr14:13515951-13516162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
113, 47
               

               
Conread position:
               
18-248
               

               
Cow position:
               
chr14:45052484-45052253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
107, 194
               

               
Conread position:
               
19-151
               

               
Cow position:
               
chr14:42276663-42276533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
19-227
               

               
Cow position:
               
chr14:37436670-37436890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
19-232
               

               
Cow position:
               
chr14:18412551-18412765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
108, 179
               

               
Conread position:
               
20-212
               

               
Cow position:
               
chr14:7316833-7316641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
175, 114
               

               
Conread position:
               
20-214
               

               
Cow position:
               
chr14:13928608-13928428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
163, 71
               

               
Conread position:
               
20-226
               

               
Cow position:
               
chr14:145472-145675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
110, 101
               

               
Conread position:
               
21-251
               

               
Cow position:
               
chr14:27303696-27303468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
22-279
               

               
Cow position:
               
chr14:11508198-11508458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
102, 126
               

               
Conread position:
               
23-219
               

               
Cow position:
               
chr14:50519143-50519337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
192, 104
               

               
Conread position:
               
23-232
               

               
Cow position:
               
chr14:24785694-24785482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
150, 111
               

               
Conread position:
               
23-232
               

               
Cow position:
               
chr14:40230599-40230806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
103, 123
               

               
Conread position:
               
23-236
               

               
Cow position:
               
chr14:48829703-48829911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
153, 125
               

               
Conread position:
               
24-225
               

               
Cow position:
               
chr14:18270396-18270195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
159, 110
               

               
Conread position:
               
25-218
               

               
Cow position:
               
chr14:11643216-11643404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
170, 23
               

               
Conread position:
               
25-219
               

               
Cow position:
               
chr14:11831754-11831957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
29, 181
               

               
Conread position:
               
26-220
               

               
Cow position:
               
chr14:41191062-41191256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
99, 172
               

               
Conread position:
               
27-213
               

               
Cow position:
               
chr14:20071103-20070909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
100, 177
               

               
Conread position:
               
27-216
               

               
Cow position:
               
chr14:42439877-42440077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 180
               

               
Conread position:
               
28-139
               

               
Cow position:
               
chr14:16761579-16761692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
28-213
               

               
Cow position:
               
chr14:41156693-41156873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
28-254
               

               
Cow position:
               
chr14:20736642-20736419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
156, 106
               

               
Conread position:
               
29-270
               

               
Cow position:
               
chr14:28465185-28465432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
94, 169
               

               
Conread position:
               
32-227
               

               
Cow position:
               
chr14:4860529-4860330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 76
               

               
Conread position:
               
33-147
               

               
Cow position:
               
chr14:11697501-11697386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
94, 83
               

               
Conread position:
               
33-183
               

               
Cow position:
               
chr14:42153376-42153527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
13, 103
               

               
Conread position:
               
33-219
               

               
Cow position:
               
chr14:22989060-22988876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
142, 101
               

               
Conread position:
               
33-228
               

               
Cow position:
               
chr14:8083224-8083028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
150, 164
               

               
Conread position:
               
34-213
               

               
Cow position:
               
chr14:5668093-5668274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 117
               

               
Conread position:
               
34-219
               

               
Cow position:
               
chr14:23465024-23465211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
97, 131
               

               
Conread position:
               
34-232
               

               
Cow position:
               
chr14:11079477-11079284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
149, 100
               

               
Conread position:
               
34-245
               

               
Cow position:
               
chr14:25285023-25284814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 150
               

               
Conread position:
               
34-248
               

               
Cow position:
               
chr14:37151915-37152121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
149, 40
               

               
Conread position:
               
35-215
               

               
Cow position:
               
chr14:25290835-25290653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 28
               

               
Conread position:
               
35-251
               

               
Cow position:
               
chr14:38920973-38920767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
36-230
               

               
Cow position:
               
chr14:10920540-10920737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 182
               

               
Conread position:
               
40-218
               

               
Cow position:
               
chr14:8027541-8027725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
40-225
               

               
Cow position:
               
chr14:10721690-10721868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
155, 7
               

               
Conread position:
               
40-233
               

               
Cow position:
               
chr14:41267713-41267895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
143, 93
               

               
Conread position:
               
40-245
               

               
Cow position:
               
chr14:30023178-30023385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
87, 111
               

               
Conread position:
               
41-218
               

               
Cow position:
               
chr14:7271232-7271416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 162
               

               
Conread position:
               
41-246
               

               
Cow position:
               
chr14:20010487-20010695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
44-205
               

               
Cow position:
               
chr14:20035737-20035573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
48-193
               

               
Cow position:
               
chr14:6384465-6384602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
48-225
               

               
Cow position:
               
chr14:47894127-47893948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 150
               

               
Conread position:
               
48-226
               

               
Cow position:
               
chr14:36151336-36151158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
79, 98
               

               
Conread position:
               
48-227
               

               
Cow position:
               
chr14:32784104-32784285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
49-183
               

               
Cow position:
               
chr14:31893590-31893458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
49-206
               

               
Cow position:
               
chr14:15228550-15228398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
49-215
               

               
Cow position:
               
chr14:8036334-8036177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
49-233
               

               
Cow position:
               
chr14:27609181-27609004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
49-233
               

               
Cow position:
               
chr14:27653174-27652988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
49-248
               

               
Cow position:
               
chr14:38747689-38747491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
7, 97
               

               
Conread position:
               
50-213
               

               
Cow position:
               
chr14:25912660-25912501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
132, 81
               

               
Conread position:
               
50-232
               

               
Cow position:
               
chr14:21592994-21593172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
133, 77
               

               
Conread position:
               
50-240
               

               
Cow position:
               
chr14:47224356-47224554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
81, 130
               

               
Conread position:
               
51-248
               

               
Cow position:
               
chr14:8590840-8591032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
132, 75
               

               
Conread position:
               
53-220
               

               
Cow position:
               
chr14:21530067-21530243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
53-236
               

               
Cow position:
               
chr14:24746473-24746279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 153
               

               
Conread position:
               
54-213
               

               
Cow position:
               
chr14:31342217-31342056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 94
               

               
Conread position:
               
57-223
               

               
Cow position:
               
chr14:47200122-47200296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
75, 148
               

               
Conread position:
               
61-247
               

               
Cow position:
               
chr14:11604880-11604698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
66-214
               

               
Cow position:
               
chr14:12071531-12071681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 132
               

               
Conread position:
               
67-224
               

               
Cow position:
               
chr14:12138009-12137854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
60, 121
               

               
Conread position:
               
68-215
               

               
Cow position:
               
chr14:24880614-24880751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
68-232
               

               
Cow position:
               
chr14:5044662-5044505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
68-232
               

               
Cow position:
               
chr14:21968518-21968681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
115, 65
               

               
Conread position:
               
68-235
               

               
Cow position:
               
chr14:2853141-2852977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 56
               

               
Conread position:
               
69-233
               

               
Cow position:
               
chr14:16593372-16593206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
106, 128
               
Show alignments to all cow chromosomes.