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Cow genome map

           
Conread name:
           
Emb1-C0005178_N04
        

               
Conread position:
               
1-123
               

               
Cow position:
               
chr21:15584371-15584249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-125
               

               
Cow position:
               
chr21:7823409-7823536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr21:35647780-35647654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-129
               

               
Cow position:
               
chr21:395916-396043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr21:37838018-37837880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr21:41597859-41597998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr21:45921010-45920873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
1-142
               

               
Cow position:
               
chr21:42414050-42413910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
38, 127
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr21:8213230-8213090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr21:30980529-30980387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
126, 57
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr21:45473710-45473568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr21:7583898-7584041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr21:712990-713138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr21:10118608-10118763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr21:30119742-30119889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr21:33563056-33563204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr21:734642-734789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr21:3818257-3818408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
126, 98
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr21:10538207-10538055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr21:13163907-13164059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr21:30157757-30157606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
126, 119
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr21:37345051-37344904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
142, 13
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr21:42384556-42384707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr21:42463640-42463496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
112, 46
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr21:46470234-46470385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
126, 55
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr21:11057830-11057680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
126, 45
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr21:22939815-22939971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr21:25383072-25383228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr21:10633589-10633432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
130, 55
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr21:45329898-45329738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr21:7221292-7221124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr21:17642936-17642762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
126, 70
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr21:19258870-19259043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr21:42007413-42007232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr21:44592161-44591966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr21:47764069-47763889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
130, 92
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr21:27624746-27624939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
130, 169
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr21:7377878-7377685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
145, 126
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr21:41579804-41580000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
126, 145
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr21:19360128-19359927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
126, 161
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr21:3360965-3360767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr21:24266518-24266310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
5, 14
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr21:28237658-28237448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
126, 33
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr21:19240825-19240624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr21:41155913-41156128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 130
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr21:13225763-13225975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
126, 169
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr21:41621173-41621386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
129, 197
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr21:802269-802064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr21:8426494-8426702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
174, 119
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr21:10264081-10264294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
126, 105
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr21:17890350-17890562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
130, 145
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr21:18341266-18341478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
43, 196
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr21:20153004-20153216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
127, 105
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr21:20213729-20213512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
148, 200
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr21:28030337-28030538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr21:28907496-28907290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 55
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr21:41140669-41140456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr21:1059128-1059318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr21:5464798-5465007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
193, 21
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr21:20160724-20160938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
130, 196
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr21:22121558-22121762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
195, 25
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr21:22210198-22209983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr21:28924157-28924384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr21:29978712-29978505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
195, 133
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr21:30231646-30231436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
130, 95
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr21:31159450-31159646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr21:36795651-36795884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
129, 215
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr21:41974326-41974107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr21:868876-868658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
126, 199
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr21:29014862-29014653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
182, 46
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr21:30592256-30592051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
172, 31
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr21:36763109-36763326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
182, 126
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr21:41610215-41610443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr21:47719251-47719042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
126, 79
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr21:13585011-13584787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
128, 39
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr21:13588812-13589027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
129, 22
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr21:14452282-14452498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
125, 147
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr21:14464628-14464851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 196
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr21:31253585-31253794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr21:38449397-38449187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
194, 54
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr21:41918194-41917974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr21:1511341-1511550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
182, 46
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr21:47363688-47363456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
38, 206
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr21:8240360-8240583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
127, 44
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr21:19958262-19958485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 46
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr21:6051551-6051776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
182, 126
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr21:11779488-11779267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
128, 28
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr21:17183970-17184190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
126, 13
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr21:13365391-13365637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
103, 44
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr21:45971124-45970908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
194, 46
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr21:33767-34005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
126, 208
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr21:71635-71860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
181, 107
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr21:30938624-30938394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
31, 139
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr21:977100-976875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
95, 140
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr21:11353113-11353340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
20, 26
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr21:37706367-37706137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
149, 131
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr21:42841549-42841311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr21:21907380-21907167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
182, 22
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr21:40291698-40291480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
182, 39
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr21:46132622-46132868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
129, 212
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr21:9416298-9416516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 120
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr21:40475547-40475777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
126, 33
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr21:47088-47325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
128, 201
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr21:957721-957947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
126, 44
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr21:3763694-3763474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr21:13303840-13304073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
125, 147
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr21:17403802-17403569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
134, 147
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr21:28919475-28919254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
182, 88
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr21:36682373-36682606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
125, 185
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr21:38900822-38901042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
194, 79
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr21:39319362-39319132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
126, 187
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr21:40589436-40589202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 149
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr21:4281827-4281605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
194, 95
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr21:5426988-5427207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
223, 98
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr21:6713477-6713245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 149
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr21:28244519-28244747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
182, 33
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr21:30835414-30835645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr21:6997988-6998221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 137
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr21:32339692-32339465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
182, 130
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr21:3585320-3585082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
134, 198
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr21:30256221-30255978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr21:11740071-11739832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
126, 78
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr21:9905801-9905570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
177, 48
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr21:15544172-15543941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
213, 21
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr21:17419034-17418789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
119, 55
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr21:40266173-40266416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr21:44825841-44825582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
62, 208
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr21:10004837-10004574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
126, 62
               

               
Conread position:
               
2-142
               

               
Cow position:
               
chr21:42562681-42562816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
2-152
               

               
Cow position:
               
chr21:17265952-17265800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
78, 113
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr21:6736140-6735967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr21:11644917-11644710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
193, 143
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr21:37299511-37299719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
126, 165
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr21:7768487-7768691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr21:41040993-41041213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
125, 121
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr21:49699991-49699768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
124, 196
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr21:17155902-17155677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 5
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr21:36909980-36910230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
124, 192
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr21:4399853-4400114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
193, 12
               

               
Conread position:
               
3-142
               

               
Cow position:
               
chr21:15976683-15976822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
123, 80
               

               
Conread position:
               
3-152
               

               
Cow position:
               
chr21:14228230-14228079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
3-152
               

               
Cow position:
               
chr21:26244964-26245114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr21:14760624-14760808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr21:41107719-41107525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
29, 105
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr21:24797707-24797914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
180, 53
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr21:23586932-23587133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
180, 104
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr21:5898351-5898144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr21:38728204-38728421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
180, 194
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr21:36508288-36508502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr21:16152490-16152713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 132
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr21:82117-82338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
216, 131
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr21:47760819-47761049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
4-138
               

               
Cow position:
               
chr21:44861062-44860934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
4-171
               

               
Cow position:
               
chr21:9990561-9990727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
123, 142
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr21:30243630-30243457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chr21:10410275-10410454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 56
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr21:16604266-16604060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
118, 144
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr21:46809720-46809506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 166
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr21:17519072-17519287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
122, 198
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr21:20163759-20163967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
171, 143
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr21:42135565-42135360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
171, 130
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr21:47465067-47464859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
179, 76
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr21:9418104-9417883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
123, 52
               

               
Conread position:
               
4-218
               

               
Cow position:
               
chr21:23568275-23568488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 127
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr21:17252927-17252712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
124, 44
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr21:32297468-32297243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
122, 202
               

               
Conread position:
               
4-220
               

               
Cow position:
               
chr21:32559314-32559105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
166, 119
               

               
Conread position:
               
4-222
               

               
Cow position:
               
chr21:21615833-21616044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
4-224
               

               
Cow position:
               
chr21:643375-643590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
192, 122
               

               
Conread position:
               
4-226
               

               
Cow position:
               
chr21:26018430-26018653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
120, 81
               

               
Conread position:
               
4-226
               

               
Cow position:
               
chr21:44251792-44251570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
123, 193
               

               
Conread position:
               
4-227
               

               
Cow position:
               
chr21:42501095-42501325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 149
               

               
Conread position:
               
4-229
               

               
Cow position:
               
chr21:29658327-29658549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
110, 79
               

               
Conread position:
               
4-229
               

               
Cow position:
               
chr21:39664347-39664123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
123, 180
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr21:18155515-18155286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
122, 158
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr21:25344912-25345142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
123, 194
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr21:27677533-27677760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
126, 43
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr21:27712192-27711957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
74, 197
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr21:11174290-11174524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
108, 201
               

               
Conread position:
               
4-234
               

               
Cow position:
               
chr21:6851223-6851444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
171, 118
               

               
Conread position:
               
4-234
               

               
Cow position:
               
chr21:33982756-33982533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
171, 42
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr21:30222396-30222624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
171, 127
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr21:39393799-39394036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
91, 128
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr21:17842946-17842704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
123, 90
               

               
Conread position:
               
4-255
               

               
Cow position:
               
chr21:10743438-10743690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
122, 55
               

               
Conread position:
               
4-255
               

               
Cow position:
               
chr21:34654125-34654371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
171, 24
               

               
Conread position:
               
4-258
               

               
Cow position:
               
chr21:641638-641888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
169, 127
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr21:37928700-37928959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
125, 147
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr21:26567725-26567581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
5-205
               

               
Cow position:
               
chr21:41287741-41287545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
178, 129
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr21:24875404-24875611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 143
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr21:44829707-44829497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
125, 193
               

               
Conread position:
               
5-214
               

               
Cow position:
               
chr21:46599413-46599618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
170, 107
               

               
Conread position:
               
5-218
               

               
Cow position:
               
chr21:2537087-2536872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
126, 197
               

               
Conread position:
               
5-219
               

               
Cow position:
               
chr21:40820801-40820586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
121, 103
               

               
Conread position:
               
5-225
               

               
Cow position:
               
chr21:20165694-20165910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr21:20318565-20318785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
125, 40
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr21:30145576-30145355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
190, 91
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr21:38720302-38720527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
145, 75
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr21:38918256-38918482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
121, 32
               

               
Conread position:
               
5-234
               

               
Cow position:
               
chr21:8545966-8545740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
125, 27
               

               
Conread position:
               
5-248
               

               
Cow position:
               
chr21:8431048-8430803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
6-129
               

               
Cow position:
               
chr21:5153674-5153796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
6-212
               

               
Cow position:
               
chr21:29069274-29069065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 192
               

               
Conread position:
               
6-213
               

               
Cow position:
               
chr21:27569116-27568900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
121, 49
               

               
Conread position:
               
6-218
               

               
Cow position:
               
chr21:11182606-11182813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 103
               

               
Conread position:
               
6-224
               

               
Cow position:
               
chr21:3177894-3178114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 173
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr21:19148163-19148384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
121, 91
               

               
Conread position:
               
6-232
               

               
Cow position:
               
chr21:13674599-13674372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
149, 132
               

               
Conread position:
               
6-236
               

               
Cow position:
               
chr21:31279309-31279532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
189, 120
               

               
Conread position:
               
7-213
               

               
Cow position:
               
chr21:15012493-15012690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
8-147
               

               
Cow position:
               
chr21:23322023-23321883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
8-236
               

               
Cow position:
               
chr21:229211-229420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
206, 22
               

               
Conread position:
               
8-250
               

               
Cow position:
               
chr21:29002100-29001850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 208
               

               
Conread position:
               
9-152
               

               
Cow position:
               
chr21:265680-265821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
9-207
               

               
Cow position:
               
chr21:17193695-17193495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 139
               

               
Conread position:
               
9-211
               

               
Cow position:
               
chr21:18568583-18568380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
126, 138
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr21:6153857-6154077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
141, 35
               

               
Conread position:
               
9-246
               

               
Cow position:
               
chr21:23606722-23606957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 131
               

               
Conread position:
               
10-219
               

               
Cow position:
               
chr21:26735466-26735662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
186, 37
               

               
Conread position:
               
11-240
               

               
Cow position:
               
chr21:34738635-34738858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 124
               

               
Conread position:
               
14-183
               

               
Cow position:
               
chr21:40059089-40059253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
18, 115
               

               
Conread position:
               
14-213
               

               
Cow position:
               
chr21:21940346-21940152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
168, 118
               

               
Conread position:
               
14-227
               

               
Cow position:
               
chr21:20174379-20174586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
145, 120
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr21:5405877-5406088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
159, 120
               

               
Conread position:
               
14-247
               

               
Cow position:
               
chr21:48482467-48482237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
169, 33
               

               
Conread position:
               
15-132
               

               
Cow position:
               
chr21:38268000-38267883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-214
               

               
Cow position:
               
chr21:30848879-30848688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
180, 116
               

               
Conread position:
               
15-237
               

               
Cow position:
               
chr21:30657932-30658147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
204, 116
               

               
Conread position:
               
17-227
               

               
Cow position:
               
chr21:27810454-27810665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
115, 29
               

               
Conread position:
               
18-213
               

               
Cow position:
               
chr21:23535774-23535972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
102, 88
               

               
Conread position:
               
18-219
               

               
Cow position:
               
chr21:12348830-12349033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
133, 116
               

               
Conread position:
               
18-224
               

               
Cow position:
               
chr21:27409667-27409468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
18-231
               

               
Cow position:
               
chr21:38482448-38482658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
132, 27
               

               
Conread position:
               
18-232
               

               
Cow position:
               
chr21:5218767-5218987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
41, 120
               

               
Conread position:
               
18-232
               

               
Cow position:
               
chr21:22211318-22211533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 130
               

               
Conread position:
               
19-152
               

               
Cow position:
               
chr21:12200168-12200302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
19-219
               

               
Cow position:
               
chr21:8986088-8986291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
108, 28
               

               
Conread position:
               
20-230
               

               
Cow position:
               
chr21:26828904-26828696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
22-232
               

               
Cow position:
               
chr21:15869759-15869963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
161, 112
               

               
Conread position:
               
23-152
               

               
Cow position:
               
chr21:43265325-43265193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
23-180
               

               
Cow position:
               
chr21:13043950-13043800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
23-214
               

               
Cow position:
               
chr21:42017533-42017340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
107, 129
               

               
Conread position:
               
23-218
               

               
Cow position:
               
chr21:42146216-42146408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
23-218
               

               
Cow position:
               
chr21:42189687-42189496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
23-219
               

               
Cow position:
               
chr21:29418640-29418838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
104, 24
               

               
Conread position:
               
23-251
               

               
Cow position:
               
chr21:8713890-8713660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
128, 111
               

               
Conread position:
               
24-180
               

               
Cow position:
               
chr21:9346493-9346651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
24-227
               

               
Cow position:
               
chr21:745246-745443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
159, 68
               

               
Conread position:
               
24-228
               

               
Cow position:
               
chr21:4108846-4109051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 135
               

               
Conread position:
               
24-229
               

               
Cow position:
               
chr21:30977185-30976990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
159, 44
               

               
Conread position:
               
24-250
               

               
Cow position:
               
chr21:5214419-5214651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
103, 226
               

               
Conread position:
               
25-212
               

               
Cow position:
               
chr21:18783397-18783208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 173
               

               
Conread position:
               
25-232
               

               
Cow position:
               
chr21:41737980-41738186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
153, 142
               

               
Conread position:
               
28-219
               

               
Cow position:
               
chr21:24350927-24351115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
95, 45
               

               
Conread position:
               
28-236
               

               
Cow position:
               
chr21:21479226-21479008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 71
               

               
Conread position:
               
31-233
               

               
Cow position:
               
chr21:16796929-16797131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
119, 154
               

               
Conread position:
               
32-211
               

               
Cow position:
               
chr21:14516028-14516197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
151, 24
               

               
Conread position:
               
32-214
               

               
Cow position:
               
chr21:36121306-36121489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
117, 95
               

               
Conread position:
               
32-233
               

               
Cow position:
               
chr21:24757020-24757219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
151, 20
               

               
Conread position:
               
33-219
               

               
Cow position:
               
chr21:27744105-27744294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
99, 166
               

               
Conread position:
               
33-230
               

               
Cow position:
               
chr21:27521259-27521067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
150, 34
               

               
Conread position:
               
33-231
               

               
Cow position:
               
chr21:34010316-34010118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
33-232
               

               
Cow position:
               
chr21:48334712-48334506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 135
               

               
Conread position:
               
33-235
               

               
Cow position:
               
chr21:30970015-30970216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
148, 94
               

               
Conread position:
               
33-238
               

               
Cow position:
               
chr21:37361162-37360953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
140, 101
               

               
Conread position:
               
33-278
               

               
Cow position:
               
chr21:22720654-22720887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
34-227
               

               
Cow position:
               
chr21:28882262-28882456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
36-248
               

               
Cow position:
               
chr21:1464426-1464637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
90, 112
               

               
Conread position:
               
37-213
               

               
Cow position:
               
chr21:23672829-23673004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
156, 90
               

               
Conread position:
               
37-219
               

               
Cow position:
               
chr21:32272004-32272194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
93, 168
               

               
Conread position:
               
37-245
               

               
Cow position:
               
chr21:15305215-15305001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 162
               

               
Conread position:
               
38-203
               

               
Cow position:
               
chr21:2294107-2294261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 90
               

               
Conread position:
               
38-240
               

               
Cow position:
               
chr21:44732958-44732755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
137, 18
               

               
Conread position:
               
38-244
               

               
Cow position:
               
chr21:27567979-27568184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
92, 72
               

               
Conread position:
               
40-214
               

               
Cow position:
               
chr21:37495859-37495684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 89
               

               
Conread position:
               
40-221
               

               
Cow position:
               
chr21:438649-438824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
155, 100
               

               
Conread position:
               
40-226
               

               
Cow position:
               
chr21:15271350-15271168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
40-231
               

               
Cow position:
               
chr21:6291833-6292024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
86, 158
               

               
Conread position:
               
40-232
               

               
Cow position:
               
chr21:3135782-3135590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
91, 108
               

               
Conread position:
               
40-232
               

               
Cow position:
               
chr21:13134688-13134873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
41-231
               

               
Cow position:
               
chr21:7424927-7424737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 106
               

               
Conread position:
               
43-227
               

               
Cow position:
               
chr21:29011880-29011703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
43-256
               

               
Cow position:
               
chr21:42454951-42455159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
140, 10
               

               
Conread position:
               
48-206
               

               
Cow position:
               
chr21:40930380-40930224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
127, 79
               

               
Conread position:
               
48-219
               

               
Cow position:
               
chr21:30031291-30031130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
48-226
               

               
Cow position:
               
chr21:8506451-8506275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
127, 86
               

               
Conread position:
               
48-226
               

               
Cow position:
               
chr21:8509339-8509163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
127, 86
               

               
Conread position:
               
49-205
               

               
Cow position:
               
chr21:8351197-8351043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
126, 85
               

               
Conread position:
               
49-222
               

               
Cow position:
               
chr21:8359129-8358962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
49-228
               

               
Cow position:
               
chr21:9590635-9590810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
141, 85
               

               
Conread position:
               
49-233
               

               
Cow position:
               
chr21:742373-742553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
134, 78
               

               
Conread position:
               
50-228
               

               
Cow position:
               
chr21:45446631-45446811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 149
               

               
Conread position:
               
52-214
               

               
Cow position:
               
chr21:32536495-32536651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
131, 73
               

               
Conread position:
               
52-219
               

               
Cow position:
               
chr21:3379653-3379488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
124, 80
               

               
Conread position:
               
53-214
               

               
Cow position:
               
chr21:16120061-16119902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
53-219
               

               
Cow position:
               
chr21:6041884-6042054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
53-232
               

               
Cow position:
               
chr21:18495321-18495492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
130, 46
               

               
Conread position:
               
54-219
               

               
Cow position:
               
chr21:45376049-45376212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
121, 80
               

               
Conread position:
               
56-219
               

               
Cow position:
               
chr21:43655805-43655967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
120, 48
               

               
Conread position:
               
61-205
               

               
Cow position:
               
chr21:31258574-31258720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
66, 137
               

               
Conread position:
               
64-295
               

               
Cow position:
               
chr21:28604202-28604425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
180, 67
               

               
Conread position:
               
66-226
               

               
Cow position:
               
chr21:5344991-5345152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
66-226
               

               
Cow position:
               
chr21:12473947-12473791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 16
               

               
Conread position:
               
66-228
               

               
Cow position:
               
chr21:17856878-17857037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
66-261
               

               
Cow position:
               
chr21:19340119-19339918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 68
               

               
Conread position:
               
67-207
               

               
Cow position:
               
chr21:40916597-40916734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
129, 46
               

               
Conread position:
               
68-218
               

               
Cow position:
               
chr21:15444970-15444818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
63, 130
               

               
Conread position:
               
68-248
               

               
Cow position:
               
chr21:18497879-18497703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 65
               

               
Conread position:
               
70-249
               

               
Cow position:
               
chr21:30359228-30359056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
113, 17
               

               
Conread position:
               
71-230
               

               
Cow position:
               
chr21:38867249-38867102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 65
               

               
Conread position:
               
75-205
               

               
Cow position:
               
chr21:5538257-5538129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
75-212
               

               
Cow position:
               
chr21:42920883-42920742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 125
               

               
Conread position:
               
76-234
               

               
Cow position:
               
chr21:48242933-48242772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 150
               

               
Conread position:
               
80-236
               

               
Cow position:
               
chr21:58570-58728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
39, 137
               

               
Conread position:
               
93-247
               

               
Cow position:
               
chr21:5488889-5489040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
90, 42
               
Show alignments to all cow chromosomes.