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Cow genome map

           
Conread name:
           
Emb1-C0005178_N04
        

               
Conread position:
               
1-128
               

               
Cow position:
               
chr27:22225623-22225747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr27:4386089-4386220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr27:12246625-12246487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr27:1290879-1291019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr27:1789167-1789309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr27:25277112-25276973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr27:30354372-30354516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr27:17646196-17646339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr27:23895392-23895248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
126, 43
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr27:17918341-17918490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr27:27641040-27641189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 70
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr27:4155968-4155818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
132, 98
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr27:15643145-15642995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
128, 49
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr27:22454803-22454956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr27:30359379-30359227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr27:30489438-30489590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr27:30908644-30908494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr27:31017857-31018005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
130, 22
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr27:29380825-29380673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
126, 47
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr27:6302496-6302656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
125, 72
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr27:22423488-22423330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr27:26919939-26920107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
118, 134
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr27:14303709-14303536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr27:1768653-1768840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr27:19543948-19544146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
133, 146
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr27:23107932-23108131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
182, 44
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr27:13318002-13318207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
129, 147
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr27:26188801-26188597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
126, 48
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr27:23554357-23554560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
130, 52
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr27:28518270-28518062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 149
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr27:28260564-28260773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
129, 44
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr27:30765003-30764799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
149, 83
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr27:20517630-20517415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
101, 134
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr27:29991475-29991697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
130, 211
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr27:10307328-10307542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
137, 51
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr27:11480664-11480877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
129, 154
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr27:12596743-12596543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr27:18558329-18558119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
131, 52
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr27:26111942-26112157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
30, 198
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr27:25152057-25151849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
132, 45
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr27:23485181-23484973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
178, 55
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr27:29693450-29693224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr27:28896854-28896633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
91, 47
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr27:6550431-6550216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
130, 19
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr27:16512199-16512413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
194, 145
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr27:16705223-16705008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
182, 133
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr27:20283616-20283399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr27:20548783-20548565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
194, 126
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr27:23545357-23545583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 203
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr27:28018310-28018077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 209
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr27:28206771-28206559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
174, 44
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr27:212929-212705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr27:30868768-30868997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
95, 205
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr27:590790-591018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
129, 201
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr27:8790769-8790993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
46, 135
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr27:19681924-19681698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
125, 147
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr27:6925057-6924831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 210
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr27:11561748-11561521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
215, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr27:15332323-15332541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 126
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr27:28478552-28478333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
173, 130
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr27:20584484-20584720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
128, 56
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr27:10582345-10582115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
130, 201
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr27:11982674-11982904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
128, 81
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr27:29319383-29319148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
129, 119
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr27:29831725-29831962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
111, 205
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr27:30872087-30872313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 33
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr27:31170092-31170328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
144, 58
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr27:4944542-4944762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
182, 122
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr27:5553441-5553215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
129, 43
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr27:7731285-7731533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr27:15454180-15453957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
174, 45
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr27:15866189-15865962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
180, 34
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr27:15925318-15925091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
129, 148
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr27:17397482-17397711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
174, 133
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr27:20514791-20514567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr27:22559855-22560082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr27:27438532-27438765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr27:27558532-27558763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr27:29184865-29185102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 201
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr27:1353555-1353322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
126, 197
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr27:7343456-7343686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
89, 110
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr27:20612494-20612262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 45
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr27:28921922-28922153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr27:14269371-14269589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
128, 61
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr27:30914981-30914748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
126, 47
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr27:2592515-2592275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 200
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr27:7935184-7935417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
68, 127
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr27:29388644-29388410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
107, 134
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr27:23632568-23632340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
224, 33
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr27:31386658-31386904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
28, 127
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr27:16965544-16965303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr27:15865579-15865336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
182, 133
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:29431436-29431201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
174, 44
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr27:12191507-12191762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
120, 13
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr27:23560059-23560312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
174, 145
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr27:19546542-19546818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 19
               

               
Conread position:
               
2-129
               

               
Cow position:
               
chr27:26413283-26413410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-142
               

               
Cow position:
               
chr27:31148732-31148592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
125, 111
               

               
Conread position:
               
2-152
               

               
Cow position:
               
chr27:22723722-22723872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-153
               

               
Cow position:
               
chr27:26090340-26090493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr27:23890909-23890706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
122, 198
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr27:19756067-19755864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
127, 29
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr27:19660903-19660697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
135, 197
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr27:22603150-22602938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
129, 45
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr27:15867367-15867143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
27, 135
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr27:6290446-6290223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
6, 147
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr27:8062379-8062605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
181, 108
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr27:12658376-12658610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
6, 199
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr27:6106671-6106449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr27:15668800-15669040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
134, 196
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr27:18435162-18435397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 125
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr27:20354561-20354329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
181, 45
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr27:22220525-22220278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
122, 197
               

               
Conread position:
               
3-133
               

               
Cow position:
               
chr27:27270571-27270702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
3-143
               

               
Cow position:
               
chr27:21393537-21393677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-152
               

               
Cow position:
               
chr27:30988767-30988618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
124, 55
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr27:27064469-27064625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr27:7958860-7959063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
124, 106
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr27:24331690-24331475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
124, 29
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr27:11993896-11994108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
120, 164
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr27:9977655-9977441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 134
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr27:20828740-20828949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr27:26118468-26118252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
127, 20
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr27:25809549-25809765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
124, 44
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr27:8962286-8962496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr27:20552808-20553031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
75, 169
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr27:6241222-6241450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr27:16088777-16088535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 208
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr27:22730711-22730948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
62, 202
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr27:19607689-19607935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
123, 44
               

               
Conread position:
               
4-145
               

               
Cow position:
               
chr27:20812874-20812734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
4-195
               

               
Cow position:
               
chr27:16230965-16231163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
31, 194
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr27:23452430-23452226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
181, 40
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr27:426938-426732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
132, 48
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr27:10323806-10323606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
122, 43
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr27:15003009-15003217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
171, 132
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr27:299412-299613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
171, 49
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr27:18507619-18507406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
127, 143
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr27:22489246-22489033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
122, 200
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr27:29593660-29593868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
123, 43
               

               
Conread position:
               
4-216
               

               
Cow position:
               
chr27:12459253-12459046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
169, 39
               

               
Conread position:
               
4-218
               

               
Cow position:
               
chr27:19508982-19508768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
170, 130
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr27:15409067-15409270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
169, 119
               

               
Conread position:
               
4-222
               

               
Cow position:
               
chr27:7412362-7412146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
122, 143
               

               
Conread position:
               
4-222
               

               
Cow position:
               
chr27:20719257-20719035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
122, 194
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr27:13940588-13940800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
4-226
               

               
Cow position:
               
chr27:10979832-10979609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
123, 194
               

               
Conread position:
               
4-226
               

               
Cow position:
               
chr27:15871130-15870908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
131, 143
               

               
Conread position:
               
4-226
               

               
Cow position:
               
chr27:20653286-20653509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 144
               

               
Conread position:
               
4-231
               

               
Cow position:
               
chr27:19387987-19387764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
4-231
               

               
Cow position:
               
chr27:30407068-30407305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr27:11323299-11323067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
122, 194
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr27:17472777-17472557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
155, 59
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr27:22035408-22035627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
178, 118
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr27:31151350-31151126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
178, 143
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr27:26121729-26121499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
127, 143
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr27:13639014-13639258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
119, 145
               

               
Conread position:
               
4-250
               

               
Cow position:
               
chr27:13254828-13255066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
5-204
               

               
Cow position:
               
chr27:6319887-6319693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
191, 126
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr27:23148134-23147927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 143
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr27:1636967-1637165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
178, 122
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr27:19685745-19685959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr27:26481227-26481453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
121, 68
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr27:27648350-27648566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
177, 125
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr27:18543959-18543735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
6-230
               

               
Cow position:
               
chr27:19452969-19452742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
133, 192
               

               
Conread position:
               
6-230
               

               
Cow position:
               
chr27:26323415-26323187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
121, 19
               

               
Conread position:
               
6-231
               

               
Cow position:
               
chr27:6162443-6162660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
189, 117
               

               
Conread position:
               
6-246
               

               
Cow position:
               
chr27:23594288-23594047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
121, 58
               

               
Conread position:
               
6-247
               

               
Cow position:
               
chr27:15315484-15315249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
177, 31
               

               
Conread position:
               
7-153
               

               
Cow position:
               
chr27:20803693-20803839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-225
               

               
Cow position:
               
chr27:6541598-6541384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
168, 124
               

               
Conread position:
               
8-143
               

               
Cow position:
               
chr27:27673051-27673186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
118, 36
               

               
Conread position:
               
8-211
               

               
Cow position:
               
chr27:16103772-16103574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
187, 38
               

               
Conread position:
               
9-208
               

               
Cow position:
               
chr27:19557349-19557159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
9-219
               

               
Cow position:
               
chr27:5539730-5539937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 118
               

               
Conread position:
               
10-125
               

               
Cow position:
               
chr27:23216356-23216468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
10-213
               

               
Cow position:
               
chr27:19717878-19717659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
117, 202
               

               
Conread position:
               
10-225
               

               
Cow position:
               
chr27:24223915-24223703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 54
               

               
Conread position:
               
11-214
               

               
Cow position:
               
chr27:17102858-17102660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
165, 81
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chr27:20749052-20749260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
182, 36
               

               
Conread position:
               
11-247
               

               
Cow position:
               
chr27:26400759-26400988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
163, 123
               

               
Conread position:
               
12-236
               

               
Cow position:
               
chr27:2957372-2957158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
171, 25
               

               
Conread position:
               
14-232
               

               
Cow position:
               
chr27:24303906-24303686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
113, 174
               

               
Conread position:
               
14-244
               

               
Cow position:
               
chr27:16246766-16246538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
39, 122
               

               
Conread position:
               
15-227
               

               
Cow position:
               
chr27:29615000-29614789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
160, 112
               

               
Conread position:
               
15-244
               

               
Cow position:
               
chr27:19576365-19576594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
167, 119
               

               
Conread position:
               
16-174
               

               
Cow position:
               
chr27:27550996-27551155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
111, 105
               

               
Conread position:
               
16-229
               

               
Cow position:
               
chr27:27255945-27255715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 219
               

               
Conread position:
               
17-149
               

               
Cow position:
               
chr27:17918761-17918894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
18-219
               

               
Cow position:
               
chr27:28931847-28932046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
18-232
               

               
Cow position:
               
chr27:18791554-18791769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
71, 182
               

               
Conread position:
               
18-234
               

               
Cow position:
               
chr27:4413863-4414072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
19-181
               

               
Cow position:
               
chr27:27747511-27747674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
108, 129
               

               
Conread position:
               
19-226
               

               
Cow position:
               
chr27:23128414-23128214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
112, 56
               

               
Conread position:
               
20-209
               

               
Cow position:
               
chr27:1184224-1184408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
20-232
               

               
Cow position:
               
chr27:20327453-20327240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 183
               

               
Conread position:
               
20-234
               

               
Cow position:
               
chr27:13801762-13801546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
107, 25
               

               
Conread position:
               
20-237
               

               
Cow position:
               
chr27:26236279-26236070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
111, 64
               

               
Conread position:
               
21-162
               

               
Cow position:
               
chr27:16205739-16205599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
109, 125
               

               
Conread position:
               
21-216
               

               
Cow position:
               
chr27:20325095-20324897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
92, 7
               

               
Conread position:
               
23-142
               

               
Cow position:
               
chr27:16237577-16237457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
23-208
               

               
Cow position:
               
chr27:232504-232317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
123, 111
               

               
Conread position:
               
23-220
               

               
Cow position:
               
chr27:22268175-22267974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 24
               

               
Conread position:
               
24-228
               

               
Cow position:
               
chr27:19933018-19932813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
85, 174
               

               
Conread position:
               
24-248
               

               
Cow position:
               
chr27:29236513-29236283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
103, 165
               

               
Conread position:
               
25-152
               

               
Cow position:
               
chr27:29658767-29658894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 59
               

               
Conread position:
               
25-213
               

               
Cow position:
               
chr27:13204407-13204226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
170, 31
               

               
Conread position:
               
25-219
               

               
Cow position:
               
chr27:25790240-25790058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
25-252
               

               
Cow position:
               
chr27:24356986-24356756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 160
               

               
Conread position:
               
26-183
               

               
Cow position:
               
chr27:7847667-7847509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
43, 110
               

               
Conread position:
               
27-232
               

               
Cow position:
               
chr27:29246205-29246401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr27:18752800-18752590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 56
               

               
Conread position:
               
32-213
               

               
Cow position:
               
chr27:1067509-1067337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
32-213
               

               
Cow position:
               
chr27:30444737-30444913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
33-203
               

               
Cow position:
               
chr27:17908317-17908491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
33-213
               

               
Cow position:
               
chr27:20048574-20048398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
162, 98
               

               
Conread position:
               
33-213
               

               
Cow position:
               
chr27:23994475-23994654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 23
               

               
Conread position:
               
33-218
               

               
Cow position:
               
chr27:22792772-22792594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
149, 91
               

               
Conread position:
               
33-234
               

               
Cow position:
               
chr27:27449945-27450141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
150, 101
               

               
Conread position:
               
34-196
               

               
Cow position:
               
chr27:23060174-23060339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
34-234
               

               
Cow position:
               
chr27:18491495-18491303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
34-249
               

               
Cow position:
               
chr27:20266286-20266502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
97, 121
               

               
Conread position:
               
35-208
               

               
Cow position:
               
chr27:26909653-26909822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 99
               

               
Conread position:
               
35-213
               

               
Cow position:
               
chr27:31157752-31157571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
35-231
               

               
Cow position:
               
chr27:24559637-24559831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
36-219
               

               
Cow position:
               
chr27:11208617-11208802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
89, 115
               

               
Conread position:
               
38-179
               

               
Cow position:
               
chr27:16336823-16336684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
134, 87
               

               
Conread position:
               
40-218
               

               
Cow position:
               
chr27:22497955-22497784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 92
               

               
Conread position:
               
40-219
               

               
Cow position:
               
chr27:21951045-21951225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
40-233
               

               
Cow position:
               
chr27:20081196-20081389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 9
               

               
Conread position:
               
41-168
               

               
Cow position:
               
chr27:23495777-23495902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
41-205
               

               
Cow position:
               
chr27:23177380-23177543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
141, 104
               

               
Conread position:
               
48-209
               

               
Cow position:
               
chr27:29183291-29183461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
79, 157
               

               
Conread position:
               
48-213
               

               
Cow position:
               
chr27:20490456-20490285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 154
               

               
Conread position:
               
48-213
               

               
Cow position:
               
chr27:27606371-27606533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
127, 97
               

               
Conread position:
               
48-219
               

               
Cow position:
               
chr27:31183501-31183328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 152
               

               
Conread position:
               
48-223
               

               
Cow position:
               
chr27:26087241-26087072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
82, 98
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chr27:30884953-30884742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
82, 128
               

               
Conread position:
               
48-298
               

               
Cow position:
               
chr27:22748253-22748006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
76, 87
               

               
Conread position:
               
49-218
               

               
Cow position:
               
chr27:15434249-15434089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
52-231
               

               
Cow position:
               
chr27:4195468-4195298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
131, 30
               

               
Conread position:
               
53-232
               

               
Cow position:
               
chr27:10581453-10581274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
53-250
               

               
Cow position:
               
chr27:18873968-18873776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
74, 94
               

               
Conread position:
               
56-218
               

               
Cow position:
               
chr27:19779794-19779633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
56-230
               

               
Cow position:
               
chr27:25000043-25000223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 146
               

               
Conread position:
               
59-232
               

               
Cow position:
               
chr27:26317980-26317811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 117
               

               
Conread position:
               
60-271
               

               
Cow position:
               
chr27:23760068-23760277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
123, 67
               

               
Conread position:
               
61-320
               

               
Cow position:
               
chr27:20561494-20561236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 71
               

               
Conread position:
               
66-226
               

               
Cow position:
               
chr27:21101383-21101544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
68-236
               

               
Cow position:
               
chr27:27020192-27020358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 66
               

               
Conread position:
               
69-231
               

               
Cow position:
               
chr27:18215260-18215418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
75-232
               

               
Cow position:
               
chr27:30441603-30441444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 123
               

               
Conread position:
               
80-237
               

               
Cow position:
               
chr27:24952061-24952214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 54
               

               
Conread position:
               
98-312
               

               
Cow position:
               
chr27:22708874-22708657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 21
               
Show alignments to all cow chromosomes.