Cow genome map

Conread name: Emb1-C0005178_N04

Conread position: 1-104
Cow position: chrX:6213881-6213984 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-107
Cow position: chrX:26625660-26625554 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-118
Cow position: chrX:37665702-37665819 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-122
Cow position: chrX:25788894-25788773 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-139
Cow position: chrX:22915029-22914892 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 130, 87

Conread position: 1-141
Cow position: chrX:5900477-5900612 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 1-141
Cow position: chrX:36514882-36514741 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 1-143
Cow position: chrX:6223117-6222973 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 0

Conread position: 1-143
Cow position: chrX:17888408-17888269 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 126, 46

Conread position: 1-143
Cow position: chrX:23091881-23092025 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 1-143
Cow position: chrX:27667444-27667577 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 1-144
Cow position: chrX:45113628-45113777 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 1-145
Cow position: chrX:19273696-19273551 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 134, 0

Conread position: 1-147
Cow position: chrX:15820606-15820752 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 132, 63

Conread position: 1-147
Cow position: chrX:42873398-42873543 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 46

Conread position: 1-148
Cow position: chrX:31626962-31626820 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 1-151
Cow position: chrX:18046412-18046558 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 129, 46

Conread position: 1-151
Cow position: chrX:29194243-29194390 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 95, 40

Conread position: 1-151
Cow position: chrX:29553296-29553448 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 126, 0

Conread position: 1-152
Cow position: chrX:11085052-11084902 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 133, 77

Conread position: 1-152
Cow position: chrX:20743615-20743766 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-152
Cow position: chrX:23498666-23498519 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-152
Cow position: chrX:23785658-23785809 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 105, 79

Conread position: 1-152
Cow position: chrX:29680250-29680099 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-152
Cow position: chrX:29733581-29733432 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 122, 0

Conread position: 1-152
Cow position: chrX:41270975-41270821 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 1-152
Cow position: chrX:42235513-42235362 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-152
Cow position: chrX:43730212-43730061 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 127, 27

Conread position: 1-153
Cow position: chrX:5679558-5679410 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 1-154
Cow position: chrX:6260136-6259985 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 1-155
Cow position: chrX:6690249-6690096 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 126, 0

Conread position: 1-159
Cow position: chrX:25459723-25459562 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 90, 57

Conread position: 1-166
Cow position: chrX:11717772-11717602 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 126, 0

Conread position: 1-174
Cow position: chrX:23562643-23562819 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 126, 171

Conread position: 1-181
Cow position: chrX:23188769-23188598 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 126, 46

Conread position: 1-182
Cow position: chrX:23113296-23113475 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 151, 0

Conread position: 1-184
Cow position: chrX:24287920-24287738 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 30

Conread position: 1-190
Cow position: chrX:169534-169342 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 131, 43

Conread position: 1-191
Cow position: chrX:41068736-41068921 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 126, 140

Conread position: 1-195
Cow position: chrX:27511439-27511628 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 182, 130

Conread position: 1-196
Cow position: chrX:31294561-31294361 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 133, 0

Conread position: 1-196
Cow position: chrX:46770952-46770754 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 94, 109

Conread position: 1-197
Cow position: chrX:28878163-28877957 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 126, 0

Conread position: 1-201
Cow position: chrX:12309375-12309173 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 125, 194

Conread position: 1-204
Cow position: chrX:5679909-5679715 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 128, 44

Conread position: 1-204
Cow position: chrX:34238730-34238938 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 200

Conread position: 1-205
Cow position: chrX:10831479-10831265 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 90

Conread position: 1-206
Cow position: chrX:34543795-34544003 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 108, 116

Conread position: 1-206
Cow position: chrX:42836192-42836398 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 182, 196

Conread position: 1-208
Cow position: chrX:27261202-27261409 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 55, 146

Conread position: 1-208
Cow position: chrX:42282588-42282796 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 27

Conread position: 1-209
Cow position: chrX:11326086-11325888 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 174, 94

Conread position: 1-211
Cow position: chrX:37489730-37489951 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 130, 106

Conread position: 1-212
Cow position: chrX:41027170-41027383 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 126, 0

Conread position: 1-213
Cow position: chrX:11762990-11762787 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 194, 131

Conread position: 1-213
Cow position: chrX:16836275-16836070 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 178, 45

Conread position: 1-213
Cow position: chrX:17524373-17524159 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 126, 197

Conread position: 1-213
Cow position: chrX:21593298-21593515 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 93, 46

Conread position: 1-213
Cow position: chrX:23561868-23562097 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 212

Conread position: 1-213
Cow position: chrX:24633695-24633910 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 56, 144

Conread position: 1-213
Cow position: chrX:29478735-29478946 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 126, 66

Conread position: 1-213
Cow position: chrX:35268877-35269080 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 167, 13

Conread position: 1-213
Cow position: chrX:40680625-40680839 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 126, 197

Conread position: 1-213
Cow position: chrX:42381101-42380888 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 125, 176

Conread position: 1-213
Cow position: chrX:48558757-48558970 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 130, 193

Conread position: 1-214
Cow position: chrX:1122532-1122322 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 168
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 126, 46

Conread position: 1-214
Cow position: chrX:11653775-11653992 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 31, 139

Conread position: 1-214
Cow position: chrX:17794992-17795204 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 174, 125

Conread position: 1-216
Cow position: chrX:4645902-4645686 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 129, 148

Conread position: 1-218
Cow position: chrX:18964812-18964605 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 135, 42

Conread position: 1-218
Cow position: chrX:45502156-45502364 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 134

Conread position: 1-219
Cow position: chrX:1088129-1087917 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 194, 46

Conread position: 1-219
Cow position: chrX:4328172-4327952 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 150, 109

Conread position: 1-219
Cow position: chrX:6559437-6559226 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 125, 79

Conread position: 1-219
Cow position: chrX:11614709-11614905 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 1-219
Cow position: chrX:20678127-20677912 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 182, 37

Conread position: 1-219
Cow position: chrX:25411918-25412149 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 126, 108

Conread position: 1-219
Cow position: chrX:27668947-27668732 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 175, 133

Conread position: 1-219
Cow position: chrX:31250399-31250620 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 129, 147

Conread position: 1-219
Cow position: chrX:35392283-35392076 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 1-220
Cow position: chrX:27394015-27393787 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 129, 193

Conread position: 1-222
Cow position: chrX:32910115-32910330 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 182, 83

Conread position: 1-223
Cow position: chrX:16575123-16575346 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 126, 206

Conread position: 1-224
Cow position: chrX:32330178-32330406 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 44

Conread position: 1-224
Cow position: chrX:34222727-34222948 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 181, 83

Conread position: 1-224
Cow position: chrX:44339310-44339086 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 126, 46

Conread position: 1-225
Cow position: chrX:11656092-11656314 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 174, 133

Conread position: 1-225
Cow position: chrX:16324003-16323779 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 129, 46

Conread position: 1-225
Cow position: chrX:34502931-34503162 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 126, 201

Conread position: 1-225
Cow position: chrX:38587832-38587610 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 129, 192

Conread position: 1-225
Cow position: chrX:41238343-41238126 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 194, 51

Conread position: 1-225
Cow position: chrX:42492512-42492285 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 126, 109

Conread position: 1-226
Cow position: chrX:12979823-12979598 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 126, 145

Conread position: 1-226
Cow position: chrX:21327922-21328151 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 149

Conread position: 1-226
Cow position: chrX:25036998-25037229 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 126, 201

Conread position: 1-226
Cow position: chrX:31442818-31442604 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 194, 130

Conread position: 1-226
Cow position: chrX:38964119-38964334 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 182, 126

Conread position: 1-227
Cow position: chrX:126783-127002 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 182, 30

Conread position: 1-227
Cow position: chrX:15007138-15006922 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 127, 118

Conread position: 1-227
Cow position: chrX:31829450-31829205 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 126, 215

Conread position: 1-227
Cow position: chrX:41871078-41871297 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 174, 122

Conread position: 1-228
Cow position: chrX:24054682-24054900 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 141

Conread position: 1-228
Cow position: chrX:40532032-40531787 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 126, 213

Conread position: 1-229
Cow position: chrX:32821040-32821281 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 126, 37

Conread position: 1-230
Cow position: chrX:151916-152146 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 126, 46

Conread position: 1-230
Cow position: chrX:6407557-6407784 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 126, 27

Conread position: 1-230
Cow position: chrX:18204456-18204226 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 51, 129

Conread position: 1-231
Cow position: chrX:7277922-7278148 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 153, 124

Conread position: 1-231
Cow position: chrX:9635179-9634950 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 144, 51

Conread position: 1-231
Cow position: chrX:17966352-17966565 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 130, 0

Conread position: 1-231
Cow position: chrX:19356480-19356705 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 41

Conread position: 1-231
Cow position: chrX:25207844-25207619 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 182, 83

Conread position: 1-231
Cow position: chrX:32420225-32420452 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 182, 28

Conread position: 1-231
Cow position: chrX:36356123-36356347 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 194, 44

Conread position: 1-231
Cow position: chrX:42893935-42894165 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 154

Conread position: 1-232
Cow position: chrX:4559750-4559977 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 126, 36

Conread position: 1-232
Cow position: chrX:22387235-22387001 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 126, 35

Conread position: 1-232
Cow position: chrX:24331787-24332019 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 129, 147

Conread position: 1-232
Cow position: chrX:25049271-25049039 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 125, 147

Conread position: 1-232
Cow position: chrX:25815890-25815657 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 126, 108

Conread position: 1-232
Cow position: chrX:29050261-29050483 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 112, 45

Conread position: 1-232
Cow position: chrX:31729453-31729681 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 182, 130

Conread position: 1-232
Cow position: chrX:31744994-31744771 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 131

Conread position: 1-232
Cow position: chrX:32943065-32942835 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 128, 175

Conread position: 1-232
Cow position: chrX:34565297-34565527 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 140, 61

Conread position: 1-232
Cow position: chrX:36975963-36976190 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 31

Conread position: 1-232
Cow position: chrX:41941634-41941866 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 126, 162

Conread position: 1-232
Cow position: chrX:42247171-42246939 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 147

Conread position: 1-232
Cow position: chrX:42331289-42331515 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 145

Conread position: 1-232
Cow position: chrX:43008619-43008853 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 7, 198

Conread position: 1-234
Cow position: chrX:19469495-19469268 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 174, 118

Conread position: 1-234
Cow position: chrX:20584339-20584554 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 174, 126

Conread position: 1-234
Cow position: chrX:27705598-27705831 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 126, 10

Conread position: 1-235
Cow position: chrX:27175014-27175244 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 126, 32

Conread position: 1-236
Cow position: chrX:11633693-11633931 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 182, 196

Conread position: 1-236
Cow position: chrX:23335961-23335728 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 129, 46

Conread position: 1-236
Cow position: chrX:41878919-41878692 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 126, 46

Conread position: 1-245
Cow position: chrX:24170718-24170470 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 125, 84

Conread position: 1-246
Cow position: chrX:17956704-17956948 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 189
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 182, 30

Conread position: 1-246
Cow position: chrX:26205437-26205204 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 125, 0

Conread position: 1-246
Cow position: chrX:39180222-39179975 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 193
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 126, 90

Conread position: 1-246
Cow position: chrX:42450003-42449758 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 150, 133

Conread position: 1-247
Cow position: chrX:5872328-5872588 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 130, 211

Conread position: 1-247
Cow position: chrX:33654833-33654585 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 129, 147

Conread position: 1-247
Cow position: chrX:47079638-47079882 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 128, 230

Conread position: 1-248
Cow position: chrX:11844231-11843978 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 5, 220

Conread position: 1-248
Cow position: chrX:15147182-15146942 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 1-248
Cow position: chrX:22822057-22822319 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 1-248
Cow position: chrX:35285184-35285434 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 126, 197

Conread position: 1-250
Cow position: chrX:30672385-30672126 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 208

Conread position: 1-261
Cow position: chrX:29601817-29601555 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 126, 145

Conread position: 1-262
Cow position: chrX:30133307-30133054 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 145, 119

Conread position: 1-271
Cow position: chrX:20887628-20887362 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 113, 28

Conread position: 1-276
Cow position: chrX:31489531-31489813 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 126, 147

Conread position: 1-281
Cow position: chrX:161423-161691 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 248, 112

Conread position: 1-307
Cow position: chrX:7351311-7351611 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 126, 58

Conread position: 1-311
Cow position: chrX:20339880-20339577 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 13

Conread position: 1-341
Cow position: chrX:1499676-1500001 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 35

Conread position: 2-130
Cow position: chrX:11073179-11073051 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-208
Cow position: chrX:20151872-20152067 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 181, 43

Conread position: 2-212
Cow position: chrX:8869390-8869181 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 111, 130

Conread position: 2-213
Cow position: chrX:10516265-10516478 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 125, 196

Conread position: 2-213
Cow position: chrX:22115305-22115090 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 130, 198

Conread position: 2-213
Cow position: chrX:40826739-40826526 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 97

Conread position: 2-214
Cow position: chrX:39220091-39220313 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 127, 209

Conread position: 2-214
Cow position: chrX:44397027-44397236 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 121, 38

Conread position: 2-215
Cow position: chrX:23098192-23097992 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 45

Conread position: 2-219
Cow position: chrX:38094504-38094296 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 172
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 44, 0

Conread position: 2-219
Cow position: chrX:38218726-38218943 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 127

Conread position: 2-223
Cow position: chrX:46072805-46072596 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 194, 125

Conread position: 2-227
Cow position: chrX:42855470-42855701 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 125, 200

Conread position: 2-231
Cow position: chrX:6599770-6599532 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 125, 203

Conread position: 2-232
Cow position: chrX:30962866-30962633 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 198

Conread position: 2-233
Cow position: chrX:38301821-38302060 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 125, 200

Conread position: 2-248
Cow position: chrX:38642261-38642499 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 143, 0

Conread position: 3-147
Cow position: chrX:47342129-47342273 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 124, 42

Conread position: 3-152
Cow position: chrX:753165-753319 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 3-174
Cow position: chrX:16416523-16416687 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 150, 11

Conread position: 3-204
Cow position: chrX:4768754-4768943 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 125, 25

Conread position: 3-209
Cow position: chrX:21665228-21665016 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 162, 203

Conread position: 3-213
Cow position: chrX:20168571-20168779 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 128, 117

Conread position: 3-218
Cow position: chrX:4399139-4399347 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 34, 11

Conread position: 3-218
Cow position: chrX:38549458-38549676 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 29, 156

Conread position: 3-219
Cow position: chrX:3806695-3806908 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 141

Conread position: 3-219
Cow position: chrX:40108506-40108283 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 200

Conread position: 3-232
Cow position: chrX:1719128-1719345 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 128, 0

Conread position: 3-232
Cow position: chrX:27446699-27446925 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 155

Conread position: 3-232
Cow position: chrX:33000918-33001141 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 110, 129

Conread position: 3-234
Cow position: chrX:8759637-8759867 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 23, 74

Conread position: 3-235
Cow position: chrX:16762784-16763014 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 88, 141

Conread position: 4-129
Cow position: chrX:46429805-46429680 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 4-142
Cow position: chrX:31312043-31312182 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 0

Conread position: 4-143
Cow position: chrX:23266429-23266568 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 4-149
Cow position: chrX:23088870-23089012 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 123, 30

Conread position: 4-158
Cow position: chrX:4615997-4615843 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 103

Conread position: 4-161
Cow position: chrX:38227093-38226938 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 123, 51

Conread position: 4-171
Cow position: chrX:33204955-33204787 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 126, 0

Conread position: 4-181
Cow position: chrX:17704403-17704579 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 122, 142

Conread position: 4-204
Cow position: chrX:30824001-30824200 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 21, 143

Conread position: 4-205
Cow position: chrX:8731108-8731310 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 123, 43

Conread position: 4-205
Cow position: chrX:27228140-27228345 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 93, 196

Conread position: 4-211
Cow position: chrX:37955861-37956067 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 121, 145

Conread position: 4-211
Cow position: chrX:39290373-39290577 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 115

Conread position: 4-213
Cow position: chrX:3494808-3494597 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 122, 193

Conread position: 4-213
Cow position: chrX:9201562-9201767 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 173, 130

Conread position: 4-213
Cow position: chrX:20957252-20957461 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 126, 194

Conread position: 4-219
Cow position: chrX:22074809-22075025 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 41

Conread position: 4-219
Cow position: chrX:37781095-37780881 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 171, 145

Conread position: 4-219
Cow position: chrX:40685314-40685099 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 171, 123

Conread position: 4-219
Cow position: chrX:44660575-44660365 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 105, 36

Conread position: 4-222
Cow position: chrX:9252149-9251930 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 172, 193

Conread position: 4-224
Cow position: chrX:26881551-26881327 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 116, 196

Conread position: 4-224
Cow position: chrX:34376956-34377174 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 171, 119

Conread position: 4-225
Cow position: chrX:22392970-22392753 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 175, 109

Conread position: 4-225
Cow position: chrX:29230013-29230246 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 119, 201

Conread position: 4-225
Cow position: chrX:34792297-34792086 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 127, 71

Conread position: 4-226
Cow position: chrX:18111392-18111615 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 122, 144

Conread position: 4-226
Cow position: chrX:38935295-38935515 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 122, 36

Conread position: 4-226
Cow position: chrX:38967902-38968132 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 65

Conread position: 4-229
Cow position: chrX:26979775-26979552 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 119, 72

Conread position: 4-229
Cow position: chrX:30337938-30337714 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 120, 22

Conread position: 4-230
Cow position: chrX:13177464-13177243 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 27

Conread position: 4-231
Cow position: chrX:29467764-29467541 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 169, 119

Conread position: 4-231
Cow position: chrX:44054816-44055046 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 126, 144

Conread position: 4-231
Cow position: chrX:44192433-44192201 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 133

Conread position: 4-232
Cow position: chrX:15545896-15546123 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 132, 143

Conread position: 4-232
Cow position: chrX:17231749-17231979 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 108, 145

Conread position: 4-232
Cow position: chrX:17292969-17293202 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 125, 194

Conread position: 4-232
Cow position: chrX:21064297-21064528 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 108, 142

Conread position: 4-232
Cow position: chrX:23563777-23563548 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 122, 144

Conread position: 4-232
Cow position: chrX:27145618-27145842 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 192, 122

Conread position: 4-232
Cow position: chrX:27431904-27431681 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 122, 0

Conread position: 4-232
Cow position: chrX:31948921-31948691 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 122, 144

Conread position: 4-232
Cow position: chrX:36109602-36109372 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 122, 139

Conread position: 4-232
Cow position: chrX:42927810-42927589 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 172, 123

Conread position: 4-232
Cow position: chrX:43050083-43050313 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 112, 80

Conread position: 4-232
Cow position: chrX:48071175-48071404 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 194

Conread position: 4-233
Cow position: chrX:34837050-34836830 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 175, 123

Conread position: 4-233
Cow position: chrX:35885713-35885483 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 179, 130

Conread position: 4-234
Cow position: chrX:35985834-35986060 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 124, 43

Conread position: 4-236
Cow position: chrX:11859523-11859288 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 134, 71

Conread position: 4-236
Cow position: chrX:19394567-19394802 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 104, 129

Conread position: 4-236
Cow position: chrX:34411860-34412098 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 123, 199

Conread position: 4-237
Cow position: chrX:24749102-24749336 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 139, 52

Conread position: 4-247
Cow position: chrX:46793732-46793493 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 174, 123

Conread position: 4-248
Cow position: chrX:5118488-5118235 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 197

Conread position: 4-248
Cow position: chrX:26843255-26843012 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 121, 196

Conread position: 4-261
Cow position: chrX:22921335-22921590 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 113, 90

Conread position: 4-272
Cow position: chrX:1552983-1553251 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 194

Conread position: 5-152
Cow position: chrX:19097209-19097056 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 27, 69

Conread position: 5-219
Cow position: chrX:907961-908171 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 190, 57

Conread position: 5-219
Cow position: chrX:2935972-2936183 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 178, 118

Conread position: 5-226
Cow position: chrX:21986275-21986065 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 170, 27

Conread position: 5-226
Cow position: chrX:34315534-34315764 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 54, 135

Conread position: 5-231
Cow position: chrX:16984656-16984875 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 170, 94

Conread position: 5-232
Cow position: chrX:11825629-11825401 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 154
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 121, 193

Conread position: 5-244
Cow position: chrX:9651009-9650768 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 186, 129

Conread position: 5-245
Cow position: chrX:35658814-35659048 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 122, 40

Conread position: 5-246
Cow position: chrX:37129284-37129526 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 121, 166

Conread position: 5-250
Cow position: chrX:6267683-6267928 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 33

Conread position: 5-260
Cow position: chrX:4289457-4289701 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 121

Conread position: 6-144
Cow position: chrX:38728750-38728887 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 6-209
Cow position: chrX:31479987-31480186 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 107, 59

Conread position: 6-210
Cow position: chrX:31436490-31436690 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 170, 125

Conread position: 6-213
Cow position: chrX:8642062-8642269 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 129, 73

Conread position: 6-214
Cow position: chrX:27075035-27074826 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 167
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 126, 142

Conread position: 6-214
Cow position: chrX:35383020-35382817 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 177, 65

Conread position: 6-219
Cow position: chrX:20583682-20583890 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 128, 0

Conread position: 6-231
Cow position: chrX:6544273-6544485 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 169, 40

Conread position: 6-233
Cow position: chrX:4632842-4632611 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 48, 118

Conread position: 6-235
Cow position: chrX:34454673-34454905 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 143

Conread position: 6-235
Cow position: chrX:36866189-36866421 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 124, 89

Conread position: 6-244
Cow position: chrX:46587838-46588074 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 121, 140

Conread position: 6-272
Cow position: chrX:6278482-6278214 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 192

Conread position: 7-213
Cow position: chrX:19761771-19761973 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 176, 127

Conread position: 7-245
Cow position: chrX:20345470-20345706 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 120, 25

Conread position: 8-152
Cow position: chrX:28098344-28098488 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 8-180
Cow position: chrX:28865984-28865814 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 144, 39

Conread position: 8-219
Cow position: chrX:45968166-45968367 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 119, 0

Conread position: 8-233
Cow position: chrX:1466180-1466408 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 167, 118

Conread position: 9-218
Cow position: chrX:34554742-34554953 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 125, 189

Conread position: 9-226
Cow position: chrX:28940261-28940481 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 70, 133

Conread position: 9-227
Cow position: chrX:32877356-32877141 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 132, 0

Conread position: 9-231
Cow position: chrX:5026275-5026492 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 165, 122

Conread position: 9-232
Cow position: chrX:19717540-19717754 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 9-232
Cow position: chrX:34532539-34532753 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 111, 0

Conread position: 9-237
Cow position: chrX:25035363-25035135 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 122, 139

Conread position: 10-219
Cow position: chrX:40336931-40337141 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 124, 43

Conread position: 10-246
Cow position: chrX:32747748-32747973 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 128

Conread position: 10-247
Cow position: chrX:28067870-28068108 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 117, 188

Conread position: 12-213
Cow position: chrX:4109206-4109409 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 114, 185

Conread position: 12-232
Cow position: chrX:33466644-33466865 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 137

Conread position: 13-159
Cow position: chrX:37062562-37062416 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 100, 122

Conread position: 14-143
Cow position: chrX:27296504-27296366 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 14-147
Cow position: chrX:33639999-33640133 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 113, 0

Conread position: 14-150
Cow position: chrX:40355059-40355192 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 113, 35

Conread position: 14-172
Cow position: chrX:32235718-32235564 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 14-232
Cow position: chrX:16763903-16763686 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 122

Conread position: 14-234
Cow position: chrX:32866899-32867112 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 161, 120

Conread position: 15-120
Cow position: chrX:19690240-19690345 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 16-212
Cow position: chrX:7911046-7910850 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 89, 73

Conread position: 16-213
Cow position: chrX:23359085-23358893 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 159, 30

Conread position: 16-215
Cow position: chrX:35681592-35681793 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 18, 132

Conread position: 16-226
Cow position: chrX:32191147-32190936 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 182

Conread position: 17-231
Cow position: chrX:11454213-11454415 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 166, 72

Conread position: 18-152
Cow position: chrX:31373564-31373703 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 18-213
Cow position: chrX:13923892-13924085 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 177, 116

Conread position: 18-232
Cow position: chrX:41790401-41790185 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 136, 181

Conread position: 18-232
Cow position: chrX:46909843-46910050 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 113, 0

Conread position: 18-254
Cow position: chrX:44995526-44995766 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 131

Conread position: 19-219
Cow position: chrX:40648923-40649132 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 186

Conread position: 19-232
Cow position: chrX:2314590-2314373 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 108, 179

Conread position: 20-152
Cow position: chrX:23860964-23860832 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 20-214
Cow position: chrX:4612852-4612649 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 174

Conread position: 20-227
Cow position: chrX:4091954-4092160 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 106, 164

Conread position: 20-287
Cow position: chrX:32020104-32019836 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 107, 128

Conread position: 21-224
Cow position: chrX:46533274-46533069 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 106, 127

Conread position: 23-169
Cow position: chrX:29563049-29562902 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 104, 33

Conread position: 23-181
Cow position: chrX:46983107-46982942 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 23-212
Cow position: chrX:48822309-48822119 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 159, 174

Conread position: 23-214
Cow position: chrX:8326937-8327130 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 104, 174

Conread position: 23-229
Cow position: chrX:34314057-34314259 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 153, 103

Conread position: 23-236
Cow position: chrX:14925309-14925523 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 128, 24

Conread position: 23-246
Cow position: chrX:17498355-17498580 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 104, 175

Conread position: 23-248
Cow position: chrX:44754347-44754130 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 89, 105

Conread position: 23-282
Cow position: chrX:23136773-23137027 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 143, 108

Conread position: 24-231
Cow position: chrX:45412205-45412002 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 159, 89

Conread position: 24-262
Cow position: chrX:1960391-1960155 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 127, 110

Conread position: 25-147
Cow position: chrX:6850245-6850367 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 25-219
Cow position: chrX:37072424-37072616 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 150, 106

Conread position: 25-231
Cow position: chrX:27206832-27207037 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 109

Conread position: 25-232
Cow position: chrX:27270410-27270612 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 60, 110

Conread position: 25-232
Cow position: chrX:34991399-34991605 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 150, 109

Conread position: 27-205
Cow position: chrX:31986537-31986356 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 172

Conread position: 27-213
Cow position: chrX:16556180-16555999 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 156, 64

Conread position: 27-219
Cow position: chrX:42760289-42760483 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 123, 107

Conread position: 27-243
Cow position: chrX:42875250-42875464 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 156, 5

Conread position: 28-174
Cow position: chrX:29688137-29687991 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 80

Conread position: 28-196
Cow position: chrX:19795466-19795301 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 75

Conread position: 28-225
Cow position: chrX:44123293-44123485 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 167, 103

Conread position: 28-228
Cow position: chrX:37752068-37751873 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 155, 99

Conread position: 29-236
Cow position: chrX:11602444-11602240 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 98, 39

Conread position: 32-218
Cow position: chrX:31983543-31983350 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 172

Conread position: 32-219
Cow position: chrX:23471824-23471638 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 143, 91

Conread position: 32-223
Cow position: chrX:41858840-41858649 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 82, 116

Conread position: 33-147
Cow position: chrX:8797291-8797407 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 33-219
Cow position: chrX:27415537-27415358 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 162, 94

Conread position: 33-225
Cow position: chrX:29451508-29451309 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 169

Conread position: 33-227
Cow position: chrX:5097756-5097556 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 33-227
Cow position: chrX:46068716-46068525 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 150, 113

Conread position: 33-228
Cow position: chrX:34270604-34270799 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 94, 128

Conread position: 33-245
Cow position: chrX:6389124-6389334 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 94, 49

Conread position: 34-214
Cow position: chrX:6640471-6640649 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 72

Conread position: 34-215
Cow position: chrX:41991090-41990897 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 93, 174

Conread position: 34-225
Cow position: chrX:14135723-14135911 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 19

Conread position: 34-231
Cow position: chrX:597430-597237 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 51

Conread position: 34-232
Cow position: chrX:12793-12985 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 51

Conread position: 36-219
Cow position: chrX:23485567-23485760 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 36-233
Cow position: chrX:25441495-25441313 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 177, 12

Conread position: 36-236
Cow position: chrX:41765513-41765701 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 152, 20

Conread position: 37-183
Cow position: chrX:31252455-31252601 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 94, 46

Conread position: 37-232
Cow position: chrX:28923076-28923255 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 40-186
Cow position: chrX:7336891-7337039 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 110, 85

Conread position: 40-205
Cow position: chrX:10237863-10237697 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 155, 0

Conread position: 40-231
Cow position: chrX:37867303-37867496 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 40-236
Cow position: chrX:41363809-41363604 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 91, 166

Conread position: 40-259
Cow position: chrX:47100547-47100328 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 138

Conread position: 41-196
Cow position: chrX:35542938-35543092 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 106

Conread position: 42-181
Cow position: chrX:40543469-40543337 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 42-219
Cow position: chrX:41166773-41166598 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 153, 71

Conread position: 45-213
Cow position: chrX:27202625-27202793 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 150, 82

Conread position: 48-182
Cow position: chrX:26692269-26692412 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 48-219
Cow position: chrX:23497633-23497466 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 147, 65

Conread position: 48-233
Cow position: chrX:41199282-41199466 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 89

Conread position: 48-235
Cow position: chrX:5915246-5915439 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 152

Conread position: 48-243
Cow position: chrX:17525809-17525629 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 95

Conread position: 48-247
Cow position: chrX:4169973-4169771 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 62

Conread position: 48-317
Cow position: chrX:15100041-15100303 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 71, 94

Conread position: 49-233
Cow position: chrX:26882021-26881832 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 102, 85

Conread position: 49-254
Cow position: chrX:21288549-21288334 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 50, 89

Conread position: 50-213
Cow position: chrX:22552919-22552755 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 98

Conread position: 50-219
Cow position: chrX:10252140-10251972 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 125, 95

Conread position: 52-219
Cow position: chrX:6480534-6480365 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 146

Conread position: 53-231
Cow position: chrX:1938077-1938256 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 72, 93

Conread position: 53-233
Cow position: chrX:11529406-11529581 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 78

Conread position: 54-224
Cow position: chrX:3494981-3494815 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 141, 25

Conread position: 55-226
Cow position: chrX:45657878-45657698 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 14, 150

Conread position: 57-249
Cow position: chrX:41215389-41215586 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 141

Conread position: 63-212
Cow position: chrX:9367389-9367539 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 123

Conread position: 66-219
Cow position: chrX:231942-231796 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 66-243
Cow position: chrX:36961792-36961962 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 121

Conread position: 66-254
Cow position: chrX:11670762-11670955 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 68

Conread position: 68-231
Cow position: chrX:37717800-37717964 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 66, 14

Conread position: 69-213
Cow position: chrX:31279845-31279703 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 78

Conread position: 70-232
Cow position: chrX:35509599-35509438 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 63, 76

Conread position: 70-248
Cow position: chrX:42311744-42311915 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 57, 79

Conread position: 72-232
Cow position: chrX:43028314-43028472 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 73

Conread position: 75-213
Cow position: chrX:37176959-37177091 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 76-227
Cow position: chrX:1996366-1996214 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 51, 72

Conread position: 85-228
Cow position: chrX:10479844-10479989 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Show alignments to all cow chromosomes.