Cow genome map


           Conread name:
           Emb1-C0005179_B14
        

               Conread position:
               1-170
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 7
               

               Conread position:
               1-249
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 7
               

               Conread position:
               1-289
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 7
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               19, 7
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               24, 8
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 7
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               6-295
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               44, 125
               

               Conread position:
               6-304
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               15, 30
               

               Conread position:
               6-342
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 103
               

               Conread position:
               6-342
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               7-160
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               7-173
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               7-249
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               7-289
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               18, 23
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               18, 23
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-319
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               43, 251
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               235
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               101, 48
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 45
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               245
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 21
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               43, 91
               

               Conread position:
               7-343
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               8-342
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               10-346
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               40, 19
               

               Conread position:
               13-297
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               14-289
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 15
               

               Conread position:
               14-342
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               36, 11
               

               Conread position:
               15-297
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               94, 14
               

               Conread position:
               15-334
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               35, 25
               

               Conread position:
               16-287
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               20-290
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-295
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-297
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               244
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               236
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               28-297
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               22, 228
               

               Conread position:
               28-341
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               22, 105
               

               Conread position:
               28-342
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               30, 25
               

               Conread position:
               28-342
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               29-342
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               233
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               31-279
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               19, 133
               

               Conread position:
               31-295
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               19, 115
               

               Conread position:
               36-294
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               17, 132
               

               Conread position:
               36-342
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               14, 110
               

               Conread position:
               40-283
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 109
               

               Conread position:
               46-342
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 180
               

               Conread position:
               49-196
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               49-342
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               54, 21
               

               Conread position:
               52-237
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 87
               

               Conread position:
               53-324
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               56, 110
               

               Conread position:
               66-302
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               10, 138
               

               Conread position:
               69-342
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               30, 76
               

               Conread position:
               113-294
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               141, 61
               

               Conread position:
               143-342
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               112, 90
               
Show alignments to all cow chromosomes.