Cow genome map
| Conread name: | Emb1-C0005179_B14 |
| Conread position: | 1-178 |
| Cow position: | chr12:41239598-41239418 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 5-340 |
| Cow position: | chr12:22593193-22593543 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 15, 25 |
| Conread position: | 6-319 |
| Cow position: | chr12:37561445-37561763 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 44, 23 |
| Conread position: | 6-342 |
| Cow position: | chr12:42231750-42232096 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 7-266 |
| Cow position: | chr12:26822033-26822278 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-288 |
| Cow position: | chr12:1404709-1404996 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-290 |
| Cow position: | chr12:24993530-24993241 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 7-295 |
| Cow position: | chr12:22571284-22571574 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-295 |
| Cow position: | chr12:33926082-33925788 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 7-295 |
| Cow position: | chr12:34175794-34176095 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-302 |
| Cow position: | chr12:30140871-30141161 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-333 |
| Cow position: | chr12:7962291-7961959 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr12:1775478-1775128 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 245 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 51, 130 |
| Conread position: | 7-342 |
| Cow position: | chr12:12929446-12929116 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 7-342 |
| Cow position: | chr12:17717738-17718088 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 240 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 8-330 |
| Cow position: | chr12:15080052-15080378 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 11-302 |
| Cow position: | chr12:536818-537113 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 20-287 |
| Cow position: | chr12:251388-251117 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-288 |
| Cow position: | chr12:23159961-23159687 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 29, 125 |
| Conread position: | 20-342 |
| Cow position: | chr12:12755704-12755368 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr12:27853496-27853159 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr12:30686196-30686527 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr12:42857075-42856742 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 27-295 |
| Cow position: | chr12:36406211-36405937 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 23, 156 |
| Conread position: | 28-342 |
| Cow position: | chr12:22747672-22748001 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 118 |
| Conread position: | 28-342 |
| Cow position: | chr12:42605718-42605389 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 31-342 |
| Cow position: | chr12:10358159-10358485 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 37-342 |
| Cow position: | chr12:33121852-33122165 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 13, 172 |
| Conread position: | 43-324 |
| Cow position: | chr12:20846612-20846896 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 65, 274 |
| Conread position: | 69-342 |
| Cow position: | chr12:45144556-45144843 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 22, 76 |
| Conread position: | 74-319 |
| Cow position: | chr12:14569305-14569060 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 67 |
| Conread position: | 85-342 |
| Cow position: | chr12:13258947-13259207 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 90-295 |
| Cow position: | chr12:41338706-41338496 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 107 |
Show alignments to all cow chromosomes.