Cow genome map


           Conread name:
           Emb1-C0005179_B14
        

               Conread position:
               1-289
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               43, 27
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 7
               

               Conread position:
               2-342
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               48, 27
               

               Conread position:
               4-343
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               243
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               20, 26
               

               Conread position:
               7-245
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               7-334
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               245
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               43, 171
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 120
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               8-289
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               16, 22
               

               Conread position:
               8-340
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               8-342
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               9-334
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               13, 28
               

               Conread position:
               15-297
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               16-247
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               16-297
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               20-295
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               88, 9
               

               Conread position:
               20-302
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-343
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               230
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               105, 9
               

               Conread position:
               28-288
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               22, 106
               

               Conread position:
               28-289
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               23, 77
               

               Conread position:
               28-294
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               22, 149
               

               Conread position:
               28-295
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               22, 118
               

               Conread position:
               28-295
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               22, 155
               

               Conread position:
               28-342
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               61, 117
               

               Conread position:
               28-342
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               22, 210
               

               Conread position:
               28-342
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 43
               

               Conread position:
               29-295
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               21, 260
               

               Conread position:
               29-342
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               21, 150
               

               Conread position:
               29-342
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               21, 89
               

               Conread position:
               29-342
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               29-342
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               30-341
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               20, 116
               

               Conread position:
               31-319
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               19, 57
               

               Conread position:
               34-334
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               31, 56
               

               Conread position:
               43-295
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               82, 140
               

               Conread position:
               47-342
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 57
               

               Conread position:
               58-290
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               110, 120
               

               Conread position:
               58-290
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               58-342
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               65-302
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               41, 155
               

               Conread position:
               74-342
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               178, 56
               

               Conread position:
               78-342
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               147-342
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               137, 107
               

               Conread position:
               178-342
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               8, 0
               
Show alignments to all cow chromosomes.