Cow genome map
| Conread name: | Emb1-C0005179_B14 |
| Conread position: | 1-295 |
| Cow position: | chr14:7226497-7226800 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 185 |
| Conread position: | 1-297 |
| Cow position: | chr14:45191085-45191375 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 1-297 |
| Cow position: | chr14:48706325-48706624 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 20, 29 |
| Conread position: | 1-342 |
| Cow position: | chr14:46548246-46548589 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 43, 7 |
| Conread position: | 2-334 |
| Cow position: | chr14:1736425-1736100 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 123, 9 |
| Conread position: | 7-197 |
| Cow position: | chr14:41476836-41477026 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 7-205 |
| Cow position: | chr14:34041006-34040806 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 7-227 |
| Cow position: | chr14:39823154-39822931 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 43, 187 |
| Conread position: | 7-264 |
| Cow position: | chr14:30713680-30713417 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 7-287 |
| Cow position: | chr14:44317725-44317994 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 7-295 |
| Cow position: | chr14:17489225-17488931 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-295 |
| Cow position: | chr14:48490699-48490992 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 43, 238 |
| Conread position: | 7-298 |
| Cow position: | chr14:24524047-24524342 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 7-334 |
| Cow position: | chr14:12740941-12740609 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr14:9450431-9450081 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr14:14421306-14420968 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 7-342 |
| Cow position: | chr14:17772063-17771733 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr14:34999259-34999595 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 47 |
| Conread position: | 7-342 |
| Cow position: | chr14:37256260-37256606 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr14:38149230-38149574 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr14:44235749-44236098 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 43, 264 |
| Conread position: | 7-343 |
| Cow position: | chr14:22104454-22104108 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 43, 59 |
| Conread position: | 7-343 |
| Cow position: | chr14:46222184-46222535 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 241 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 9-302 |
| Cow position: | chr14:33671652-33671950 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 14-342 |
| Cow position: | chr14:2296816-2297145 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 15-341 |
| Cow position: | chr14:41766199-41766524 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 16-196 |
| Cow position: | chr14:29707486-29707661 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 16-342 |
| Cow position: | chr14:33679174-33679497 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 18-342 |
| Cow position: | chr14:11475180-11474846 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 242 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 32, 11 |
| Conread position: | 19-340 |
| Cow position: | chr14:21688386-21688708 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 25, 11 |
| Conread position: | 20-265 |
| Cow position: | chr14:32733263-32733011 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-295 |
| Cow position: | chr14:27065656-27065380 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-297 |
| Cow position: | chr14:13463547-13463825 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 81, 12 |
| Conread position: | 20-342 |
| Cow position: | chr14:5531452-5531788 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 30, 7 |
| Conread position: | 20-342 |
| Cow position: | chr14:16917612-16917278 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr14:17689240-17689577 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr14:27041267-27040935 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr14:32449077-32449417 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 20-342 |
| Cow position: | chr14:32584913-32584577 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr14:35292404-35292078 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 30, 7 |
| Conread position: | 20-342 |
| Cow position: | chr14:35383531-35383203 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr14:36710926-36710598 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 30, 109 |
| Conread position: | 20-342 |
| Cow position: | chr14:50113482-50113818 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 28-342 |
| Cow position: | chr14:41445120-41445453 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 28-342 |
| Cow position: | chr14:44381458-44381767 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 131 |
| Conread position: | 28-342 |
| Cow position: | chr14:45026833-45026502 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 34-295 |
| Cow position: | chr14:11151787-11151519 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 34-340 |
| Cow position: | chr14:48361310-48361634 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 16, 171 |
| Conread position: | 40-342 |
| Cow position: | chr14:37226304-37226621 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 49-296 |
| Cow position: | chr14:44583394-44583633 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 202, 16 |
| Conread position: | 49-297 |
| Cow position: | chr14:35931513-35931751 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 56-287 |
| Cow position: | chr14:11636713-11636946 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 47, 73 |
| Conread position: | 64-342 |
| Cow position: | chr14:35496688-35496976 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 36, 62 |
| Conread position: | 70-342 |
| Cow position: | chr14:34167470-34167751 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 55, 71 |
| Conread position: | 162-340 |
| Cow position: | chr14:19449271-19449083 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 193-342 |
| Cow position: | chr14:11563828-11563988 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 202-342 |
| Cow position: | chr14:43563374-43563524 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.