Cow genome map

Conread name: Emb1-C0005179_B14

Conread position: 1-182
Cow position: chr15:7509033-7508847 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 8

Conread position: 1-198
Cow position: chr15:16285324-16285133 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 0

Conread position: 1-280
Cow position: chr15:30727149-30726866 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 49, 7

Conread position: 1-289
Cow position: chr15:22733255-22732972 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 191
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 7

Conread position: 1-342
Cow position: chr15:2410599-2410254 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 7

Conread position: 1-342
Cow position: chr15:22153753-22154093 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 10

Conread position: 1-342
Cow position: chr15:24287390-24287050 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 7

Conread position: 1-342
Cow position: chr15:31847661-31848017 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 250
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 20, 8

Conread position: 1-342
Cow position: chr15:49198533-49198885 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 7

Conread position: 4-273
Cow position: chr15:7552722-7552995 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 17, 5

Conread position: 4-347
Cow position: chr15:7930672-7931032 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 17, 31

Conread position: 7-249
Cow position: chr15:3837359-3837112 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 43, 176

Conread position: 7-283
Cow position: chr15:280417-280142 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 42, 27

Conread position: 7-288
Cow position: chr15:22540716-22540428 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 14, 23

Conread position: 7-290
Cow position: chr15:6330129-6330411 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 102

Conread position: 7-295
Cow position: chr15:10825574-10825869 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 44, 22

Conread position: 7-295
Cow position: chr15:28488020-28487731 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 14, 23

Conread position: 7-295
Cow position: chr15:33123485-33123779 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 14, 23

Conread position: 7-295
Cow position: chr15:52977059-52977353 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 18, 23

Conread position: 7-297
Cow position: chr15:480683-480982 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 0

Conread position: 7-297
Cow position: chr15:24297297-24297592 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 23

Conread position: 7-333
Cow position: chr15:36356981-36356645 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 14, 23

Conread position: 7-338
Cow position: chr15:6487563-6487907 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 222
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 197

Conread position: 7-342
Cow position: chr15:313691-313352 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 236
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 14, 23

Conread position: 7-342
Cow position: chr15:2617953-2617613 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 226
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 23

Conread position: 7-342
Cow position: chr15:4081108-4081453 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 14, 23

Conread position: 7-342
Cow position: chr15:6384450-6384100 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 232
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 110

Conread position: 7-342
Cow position: chr15:13546945-13546595 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 43, 140

Conread position: 7-342
Cow position: chr15:21534026-21533678 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 234
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 14, 23

Conread position: 7-342
Cow position: chr15:21840221-21840580 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 26

Conread position: 7-342
Cow position: chr15:25070390-25070042 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 236
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 23

Conread position: 7-342
Cow position: chr15:31363569-31363916 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 232
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 23

Conread position: 7-342
Cow position: chr15:52208644-52208992 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 23

Conread position: 7-344
Cow position: chr15:4673348-4673700 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 241
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 0

Conread position: 8-342
Cow position: chr15:6804669-6805021 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 22

Conread position: 9-218
Cow position: chr15:22433419-22433630 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 82

Conread position: 9-342
Cow position: chr15:17682147-17681805 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 22

Conread position: 10-337
Cow position: chr15:51227230-51227574 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 21

Conread position: 11-245
Cow position: chr15:38678198-38678431 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 158

Conread position: 11-295
Cow position: chr15:443681-443392 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 39, 159

Conread position: 15-279
Cow position: chr15:33746604-33746864 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 25

Conread position: 16-293
Cow position: chr15:51911431-51911137 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 282

Conread position: 16-295
Cow position: chr15:20405624-20405340 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 34, 13

Conread position: 16-302
Cow position: chr15:14574189-14573898 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 18

Conread position: 16-342
Cow position: chr15:29341938-29341598 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 13

Conread position: 19-342
Cow position: chr15:36279903-36279562 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 66, 10

Conread position: 20-295
Cow position: chr15:1600704-1600984 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 9

Conread position: 20-295
Cow position: chr15:11269119-11269399 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 30, 14

Conread position: 20-295
Cow position: chr15:42532038-42532317 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 30, 9

Conread position: 20-297
Cow position: chr15:16788662-16788387 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 32, 9

Conread position: 20-297
Cow position: chr15:37472448-37472166 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 86, 17

Conread position: 20-328
Cow position: chr15:59755-60068 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 88, 7

Conread position: 20-342
Cow position: chr15:4653593-4653923 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 30, 16

Conread position: 20-342
Cow position: chr15:4727322-4727659 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 31, 9

Conread position: 20-342
Cow position: chr15:4924281-4924616 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr15:16514184-16514514 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 30, 12

Conread position: 20-342
Cow position: chr15:17397840-17398168 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr15:27748127-27748462 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr15:36620020-36619686 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 233
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 33, 9

Conread position: 20-342
Cow position: chr15:44072564-44072900 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr15:51219858-51220193 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 237
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 30, 9

Conread position: 20-343
Cow position: chr15:2900134-2899801 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 38, 9

Conread position: 28-290
Cow position: chr15:7565126-7565394 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 118

Conread position: 28-295
Cow position: chr15:3891690-3891963 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 117

Conread position: 28-295
Cow position: chr15:4917321-4917587 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 172

Conread position: 28-295
Cow position: chr15:6080829-6081094 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 197

Conread position: 28-295
Cow position: chr15:25132079-25132352 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 28-334
Cow position: chr15:32732530-32732210 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 210

Conread position: 28-338
Cow position: chr15:37631144-37631470 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 22, 236

Conread position: 28-341
Cow position: chr15:9437745-9438062 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 14

Conread position: 28-342
Cow position: chr15:4952426-4952756 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 30, 25

Conread position: 28-342
Cow position: chr15:5497180-5497505 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 149

Conread position: 28-342
Cow position: chr15:7547000-7547329 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 6, 118

Conread position: 28-342
Cow position: chr15:18229189-18229518 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 22, 118

Conread position: 29-342
Cow position: chr15:8101582-8101910 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 117

Conread position: 29-342
Cow position: chr15:15344979-15344651 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 225
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 29-343
Cow position: chr15:32491764-32491435 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 21, 0

Conread position: 29-347
Cow position: chr15:37393849-37394168 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 25

Conread position: 34-342
Cow position: chr15:5982774-5983095 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 45-341
Cow position: chr15:1850042-1849739 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 83

Conread position: 48-342
Cow position: chr15:23275422-23275123 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 25

Conread position: 53-333
Cow position: chr15:29003063-29003356 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 91

Conread position: 58-298
Cow position: chr15:44298697-44298458 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 51, 102

Conread position: 60-302
Cow position: chr15:52440297-52440539 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 48, 194

Conread position: 65-342
Cow position: chr15:21825026-21825317 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 80

Conread position: 73-342
Cow position: chr15:5019565-5019844 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 105

Show alignments to all cow chromosomes.