Cow genome map


           Conread name:
           Emb1-C0005179_B14
        

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               256
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               20, 8
               

               Conread position:
               2-287
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 6
               

               Conread position:
               2-344
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               249
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               18, 7
               

               Conread position:
               4-342
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               6-295
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               6-342
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               253
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               15, 22
               

               Conread position:
               7-235
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               7-242
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               7-265
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 139
               

               Conread position:
               7-287
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               7-289
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               7-290
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               43, 188
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               18, 23
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               18, 23
               

               Conread position:
               7-298
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               7-327
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               43, 135
               

               Conread position:
               7-327
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-334
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               8-342
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               9-297
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               41, 194
               

               Conread position:
               9-342
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               12, 21
               

               Conread position:
               10-295
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               14-262
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               97, 18
               

               Conread position:
               16-342
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               17-212
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               20-295
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-296
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               38, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               30, 16
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               240
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               20-343
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               21-297
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               32, 8
               

               Conread position:
               28-310
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               28-340
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 142
               

               Conread position:
               28-342
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               28-342
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               22, 261
               

               Conread position:
               28-342
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               28-343
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               82, 195
               

               Conread position:
               29-342
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               29-342
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               29-342
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               31-342
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               237
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               34-327
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               16, 150
               

               Conread position:
               34-334
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               16, 205
               

               Conread position:
               36-342
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               39-295
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               11, 144
               

               Conread position:
               42-342
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               67, 22
               

               Conread position:
               49-295
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               86, 121
               

               Conread position:
               69-342
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               77-282
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               29, 108
               

               Conread position:
               97-341
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               101-342
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               42, 126
               
Show alignments to all cow chromosomes.