Cow genome map

Conread name: Emb1-C0005179_B14

Conread position: 1-294
Cow position: chr17:24311158-24311439 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 20, 120

Conread position: 1-342
Cow position: chr17:14393979-14394329 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 7

Conread position: 1-342
Cow position: chr17:20694519-20694865 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 240
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 51, 7

Conread position: 2-341
Cow position: chr17:4569572-4569915 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 19, 9

Conread position: 4-341
Cow position: chr17:43146255-43145905 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 26

Conread position: 5-342
Cow position: chr17:18197189-18197540 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 8, 26

Conread position: 6-342
Cow position: chr17:14233284-14232928 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 240
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 16, 31

Conread position: 7-263
Cow position: chr17:18200378-18200640 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 171
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 122

Conread position: 7-295
Cow position: chr17:452155-452449 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 251

Conread position: 7-295
Cow position: chr17:3742483-3742777 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 18, 23

Conread position: 7-295
Cow position: chr17:15709670-15709385 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 176

Conread position: 7-295
Cow position: chr17:17127290-17127584 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 14, 23

Conread position: 7-295
Cow position: chr17:27792460-27792166 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 7-298
Cow position: chr17:3327442-3327741 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 23

Conread position: 7-328
Cow position: chr17:22562468-22562801 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 7-342
Cow position: chr17:11785200-11785550 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 14, 23

Conread position: 8-302
Cow position: chr17:7561631-7561353 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 15, 27

Conread position: 8-324
Cow position: chr17:4782020-4781717 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 221
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 22

Conread position: 13-342
Cow position: chr17:8222017-8222359 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 47, 15

Conread position: 15-185
Cow position: chr17:23146644-23146813 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 43, 14

Conread position: 15-335
Cow position: chr17:44402686-44403007 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 210
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 14

Conread position: 16-342
Cow position: chr17:4297244-4297574 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 20-290
Cow position: chr17:14030511-14030236 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 30, 9

Conread position: 20-295
Cow position: chr17:14294210-14293931 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 32, 7

Conread position: 20-328
Cow position: chr17:16903219-16903530 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 30, 9

Conread position: 20-333
Cow position: chr17:36816027-36816332 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 236
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 12

Conread position: 20-342
Cow position: chr17:3314436-3314768 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 9

Conread position: 20-342
Cow position: chr17:8204263-8204600 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr17:13930228-13930562 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr17:17132687-17133015 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 14

Conread position: 20-342
Cow position: chr17:18100747-18100411 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr17:25738634-25738969 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 30, 9

Conread position: 23-334
Cow position: chr17:20097978-20097657 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 27, 142

Conread position: 28-342
Cow position: chr17:15438139-15438469 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 224
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 22, 0

Conread position: 28-342
Cow position: chr17:18124596-18124267 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 0

Conread position: 28-342
Cow position: chr17:24291980-24292301 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 181

Conread position: 29-265
Cow position: chr17:136984-137229 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 29-342
Cow position: chr17:253162-253492 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 21, 0

Conread position: 29-342
Cow position: chr17:24027651-24027325 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 79, 188

Conread position: 30-337
Cow position: chr17:9752136-9752457 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 20, 185

Conread position: 34-342
Cow position: chr17:41412192-41412502 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 87

Conread position: 35-342
Cow position: chr17:43990828-43991149 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 217
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 15, 210

Conread position: 37-342
Cow position: chr17:26830552-26830241 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 109

Conread position: 38-291
Cow position: chr17:35300188-35299926 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 12, 0

Conread position: 45-347
Cow position: chr17:4481519-4481213 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 198
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 63, 100

Conread position: 64-342
Cow position: chr17:15373784-15374076 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 61, 0

Conread position: 67-259
Cow position: chr17:1785626-1785438 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 184, 41

Conread position: 80-342
Cow position: chr17:17069310-17069585 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 27, 178

Conread position: 82-280
Cow position: chr17:19789632-19789828 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 74

Conread position: 97-249
Cow position: chr17:19888595-19888747 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 98-342
Cow position: chr17:14305725-14305475 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 123, 32

Conread position: 98-342
Cow position: chr17:20054575-20054829 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 94, 128

Conread position: 147-295
Cow position: chr17:2150656-2150805 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 0

Show alignments to all cow chromosomes.