Cow genome map
| Conread name: | Emb1-C0005179_B14 |
| Conread position: | 1-301 |
| Cow position: | chr20:29053843-29054141 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 1-341 |
| Cow position: | chr20:36419213-36418861 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 1-342 |
| Cow position: | chr20:10495492-10495841 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 2-205 |
| Cow position: | chr20:25332437-25332233 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 18, 6 |
| Conread position: | 2-294 |
| Cow position: | chr20:18969228-18969525 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 6 |
| Conread position: | 2-342 |
| Cow position: | chr20:2653645-2653985 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 48, 27 |
| Conread position: | 3-302 |
| Cow position: | chr20:37582581-37582867 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 16, 6 |
| Conread position: | 4-342 |
| Cow position: | chr20:33182180-33181831 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 18, 5 |
| Conread position: | 6-289 |
| Cow position: | chr20:10037301-10037012 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 7-295 |
| Cow position: | chr20:752654-752948 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-295 |
| Cow position: | chr20:2180245-2179953 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-295 |
| Cow position: | chr20:7569589-7569296 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 146 |
| Conread position: | 7-295 |
| Cow position: | chr20:7594078-7593784 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 147 |
| Conread position: | 7-295 |
| Cow position: | chr20:24568763-24568469 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 43, 139 |
| Conread position: | 7-295 |
| Cow position: | chr20:39233737-39234031 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-302 |
| Cow position: | chr20:8200723-8201024 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 7-333 |
| Cow position: | chr20:10493715-10494050 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 7-342 |
| Cow position: | chr20:870500-870157 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 7-342 |
| Cow position: | chr20:7811322-7810978 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 7-342 |
| Cow position: | chr20:19243981-19244318 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 7-342 |
| Cow position: | chr20:23805371-23805021 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr20:28163551-28163900 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-343 |
| Cow position: | chr20:16560035-16559684 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 7-343 |
| Cow position: | chr20:18355737-18356088 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 9-333 |
| Cow position: | chr20:35844805-35844471 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 11-151 |
| Cow position: | chr20:13788643-13788783 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 11-244 |
| Cow position: | chr20:24518454-24518682 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 16-296 |
| Cow position: | chr20:12686063-12685781 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 16-337 |
| Cow position: | chr20:37956302-37955985 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 34, 166 |
| Conread position: | 16-343 |
| Cow position: | chr20:5936475-5936148 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 184, 13 |
| Conread position: | 20-295 |
| Cow position: | chr20:12568790-12568510 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 20-302 |
| Cow position: | chr20:19424567-19424837 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 38, 9 |
| Conread position: | 20-342 |
| Cow position: | chr20:19844311-19844641 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr20:25846100-25845768 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 30, 7 |
| Conread position: | 21-314 |
| Cow position: | chr20:14867855-14867564 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 23-341 |
| Cow position: | chr20:13654768-13654437 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 10, 126 |
| Conread position: | 28-343 |
| Cow position: | chr20:6136461-6136132 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 22, 34 |
| Conread position: | 43-295 |
| Cow position: | chr20:35108644-35108387 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 139 |
| Conread position: | 44-290 |
| Cow position: | chr20:13507014-13506763 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 56-289 |
| Cow position: | chr20:11411475-11411241 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 52, 133 |
Show alignments to all cow chromosomes.