Cow genome map
| Conread name: | Emb1-C0005179_B14 |
| Conread position: | 1-264 |
| Cow position: | chr22:30068027-30067763 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 1-341 |
| Cow position: | chr22:3304213-3303861 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 59, 7 |
| Conread position: | 1-342 |
| Cow position: | chr22:36356510-36356864 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 5-342 |
| Cow position: | chr22:15888259-15888604 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 25 |
| Conread position: | 6-295 |
| Cow position: | chr22:18196719-18197015 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 23, 178 |
| Conread position: | 7-235 |
| Cow position: | chr22:18614720-18614953 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 7-243 |
| Cow position: | chr22:44367032-44366791 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-273 |
| Cow position: | chr22:15055040-15055309 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 29 |
| Conread position: | 7-289 |
| Cow position: | chr22:41473240-41472957 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 13, 25 |
| Conread position: | 7-295 |
| Cow position: | chr22:44100896-44100602 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-297 |
| Cow position: | chr22:1026465-1026746 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-297 |
| Cow position: | chr22:5935697-5935412 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-302 |
| Cow position: | chr22:36596093-36595806 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 7-319 |
| Cow position: | chr22:29854300-29854618 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-334 |
| Cow position: | chr22:11802603-11802264 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-334 |
| Cow position: | chr22:30676281-30675942 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 7-341 |
| Cow position: | chr22:1482859-1483206 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 172 |
| Conread position: | 7-342 |
| Cow position: | chr22:532542-532887 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 247 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 7-342 |
| Cow position: | chr22:5931641-5931289 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr22:8735272-8734919 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 7-342 |
| Cow position: | chr22:10907755-10907409 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr22:17326036-17325688 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr22:20238389-20238039 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr22:39306086-39306446 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 16, 27 |
| Conread position: | 9-338 |
| Cow position: | chr22:41169348-41169690 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 68, 20 |
| Conread position: | 15-221 |
| Cow position: | chr22:6061581-6061376 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 14 |
| Conread position: | 15-342 |
| Cow position: | chr22:14600564-14600881 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 16-181 |
| Cow position: | chr22:841384-841553 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 16-297 |
| Cow position: | chr22:583633-583366 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 20-185 |
| Cow position: | chr22:41924831-41924666 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-214 |
| Cow position: | chr22:44936402-44936600 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-231 |
| Cow position: | chr22:6334270-6334486 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 29, 9 |
| Conread position: | 20-231 |
| Cow position: | chr22:32205519-32205734 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 20-286 |
| Cow position: | chr22:19601341-19601074 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-289 |
| Cow position: | chr22:11035748-11036023 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 38, 9 |
| Conread position: | 20-289 |
| Cow position: | chr22:11635960-11635690 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr22:558244-557909 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr22:3434505-3434170 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 20-342 |
| Cow position: | chr22:13722281-13721946 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 20-342 |
| Cow position: | chr22:13767785-13768104 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr22:18604348-18604012 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr22:19141229-19140907 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 20-342 |
| Cow position: | chr22:26105684-26105344 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr22:28784578-28784914 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 28-295 |
| Cow position: | chr22:2562279-2562011 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 22, 197 |
| Conread position: | 28-295 |
| Cow position: | chr22:8487409-8487136 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 22, 155 |
| Conread position: | 28-295 |
| Cow position: | chr22:24818289-24818027 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 28-297 |
| Cow position: | chr22:10578020-10577749 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 22, 151 |
| Conread position: | 28-302 |
| Cow position: | chr22:37269563-37269843 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 22, 118 |
| Conread position: | 28-342 |
| Cow position: | chr22:7279008-7279340 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 28-342 |
| Cow position: | chr22:35669198-35668874 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 25, 118 |
| Conread position: | 29-340 |
| Cow position: | chr22:31332406-31332080 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 29-340 |
| Cow position: | chr22:40372875-40373193 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 21, 128 |
| Conread position: | 29-342 |
| Cow position: | chr22:10784199-10784516 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 29-342 |
| Cow position: | chr22:34170809-34171136 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 21, 141 |
| Conread position: | 30-342 |
| Cow position: | chr22:42993644-42993967 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 20, 111 |
| Conread position: | 31-295 |
| Cow position: | chr22:17812158-17811888 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 19, 152 |
| Conread position: | 37-296 |
| Cow position: | chr22:4227813-4227550 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 181 |
| Conread position: | 43-342 |
| Cow position: | chr22:48272523-48272205 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 58-342 |
| Cow position: | chr22:30172836-30173123 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 97-336 |
| Cow position: | chr22:5014629-5014872 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 154, 108 |
| Conread position: | 158-342 |
| Cow position: | chr22:94210-94020 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 133, 69 |
Show alignments to all cow chromosomes.