Cow genome map
| Conread name: | Emb1-C0005179_B14 |
| Conread position: | 1-293 |
| Cow position: | chr23:2438872-2438575 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 1-302 |
| Cow position: | chr23:15039863-15039565 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 7-288 |
| Cow position: | chr23:4080581-4080868 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 43, 139 |
| Conread position: | 7-295 |
| Cow position: | chr23:3417889-3417598 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-295 |
| Cow position: | chr23:19316924-19317218 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 7-295 |
| Cow position: | chr23:19621402-19621112 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-295 |
| Cow position: | chr23:21009168-21008874 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 7-295 |
| Cow position: | chr23:36097259-36097553 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 7-296 |
| Cow position: | chr23:8705304-8705595 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 43, 135 |
| Conread position: | 7-342 |
| Cow position: | chr23:15659111-15658772 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 7-342 |
| Cow position: | chr23:16496829-16496484 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr23:37200078-37199729 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 244 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-343 |
| Cow position: | chr23:22989436-22989090 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 10-342 |
| Cow position: | chr23:1011389-1011041 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 11, 20 |
| Conread position: | 13-342 |
| Cow position: | chr23:20178125-20177793 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 15-334 |
| Cow position: | chr23:616798-616482 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 91, 17 |
| Conread position: | 19-342 |
| Cow position: | chr23:40372776-40372440 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 10 |
| Conread position: | 20-235 |
| Cow position: | chr23:3878637-3878420 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-290 |
| Cow position: | chr23:11781247-11781512 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 20-295 |
| Cow position: | chr23:1800093-1800369 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 20-319 |
| Cow position: | chr23:30212389-30212090 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 20-342 |
| Cow position: | chr23:2579047-2579381 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 20-342 |
| Cow position: | chr23:14960497-14960161 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr23:14971494-14971158 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr23:22169341-22169677 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 20-342 |
| Cow position: | chr23:36028927-36028591 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 23-342 |
| Cow position: | chr23:16056204-16056507 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 86, 29 |
| Conread position: | 25-294 |
| Cow position: | chr23:7043346-7043086 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 64 |
| Conread position: | 26-290 |
| Cow position: | chr23:8289880-8290150 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 119 |
| Conread position: | 27-342 |
| Cow position: | chr23:24119017-24119341 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 23, 115 |
| Conread position: | 29-295 |
| Cow position: | chr23:4308715-4308443 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 31-342 |
| Cow position: | chr23:1021460-1021141 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 155 |
| Conread position: | 36-342 |
| Cow position: | chr23:2760368-2760688 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 255 |
| Conread position: | 36-342 |
| Cow position: | chr23:15179536-15179854 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 43-295 |
| Cow position: | chr23:1249054-1248797 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 82, 139 |
| Conread position: | 49-300 |
| Cow position: | chr23:36472823-36473081 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 51, 140 |
| Conread position: | 53-295 |
| Cow position: | chr23:11027893-11028137 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 7, 89 |
| Conread position: | 58-342 |
| Cow position: | chr23:34256465-34256167 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 50, 121 |
| Conread position: | 68-342 |
| Cow position: | chr23:26307545-26307823 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 183, 131 |
| Conread position: | 148-341 |
| Cow position: | chr23:1114673-1114869 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 106, 99 |
Show alignments to all cow chromosomes.