Cow genome map
| Conread name: | Emb1-C0005179_B14 |
| Conread position: | 1-288 |
| Cow position: | chr27:10282434-10282704 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 49, 7 |
| Conread position: | 1-295 |
| Cow position: | chr27:29858912-29859206 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 6-342 |
| Cow position: | chr27:25988811-25989155 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 16, 27 |
| Conread position: | 7-295 |
| Cow position: | chr27:166475-166190 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-295 |
| Cow position: | chr27:18696778-18697072 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 7-297 |
| Cow position: | chr27:1520118-1520413 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 7-330 |
| Cow position: | chr27:24114588-24114904 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 14, 24 |
| Conread position: | 7-340 |
| Cow position: | chr27:27665448-27665786 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 7-342 |
| Cow position: | chr27:13900334-13900681 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr27:20809852-20810201 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr27:28294422-28294075 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr27:28923442-28923800 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 7-343 |
| Cow position: | chr27:12147206-12146855 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 7-343 |
| Cow position: | chr27:17404425-17404074 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 7-343 |
| Cow position: | chr27:31267673-31268017 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 12-158 |
| Cow position: | chr27:2379811-2379960 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 15-340 |
| Cow position: | chr27:1905110-1904785 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 17-342 |
| Cow position: | chr27:25965497-25965169 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 20-204 |
| Cow position: | chr27:25797796-25797982 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 20-295 |
| Cow position: | chr27:19524261-19523981 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-295 |
| Cow position: | chr27:24296790-24296510 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr27:3233070-3232744 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 20-342 |
| Cow position: | chr27:4332273-4331953 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr27:9990760-9990421 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr27:15034641-15034305 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 29, 9 |
| Conread position: | 28-295 |
| Cow position: | chr27:28042997-28042722 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 18, 157 |
| Conread position: | 28-338 |
| Cow position: | chr27:26552963-26552656 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 28-342 |
| Cow position: | chr27:5984568-5984244 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 22, 114 |
| Conread position: | 28-342 |
| Cow position: | chr27:15634874-15634545 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 28-342 |
| Cow position: | chr27:26855521-26855850 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 29-238 |
| Cow position: | chr27:1846918-1846705 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 47-295 |
| Cow position: | chr27:27193873-27193626 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 59, 123 |
| Conread position: | 58-295 |
| Cow position: | chr27:27235837-27236078 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 50, 99 |
| Conread position: | 58-343 |
| Cow position: | chr27:30750865-30750575 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 192, 95 |
| Conread position: | 113-338 |
| Cow position: | chr27:26031520-26031288 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 40, 92 |
| Conread position: | 139-330 |
| Cow position: | chr27:25972048-25971859 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 72 |
Show alignments to all cow chromosomes.