Cow genome map

Conread name: Emb1-C0005179_B14

Conread position: 1-289
Cow position: chr7:45953214-45953503 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 49, 7

Conread position: 1-300
Cow position: chr7:23173124-23172822 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 7

Conread position: 1-341
Cow position: chr7:54853871-54854221 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 7

Conread position: 1-342
Cow position: chr7:34220072-34219737 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 49, 7

Conread position: 1-342
Cow position: chr7:34667427-34667744 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 236
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 253, 7

Conread position: 1-342
Cow position: chr7:37022560-37022912 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 21, 7

Conread position: 1-342
Cow position: chr7:52449948-52449610 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 7

Conread position: 1-347
Cow position: chr7:21850866-21850521 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 7

Conread position: 6-295
Cow position: chr7:28624583-28624870 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 15, 24

Conread position: 7-235
Cow position: chr7:67491147-67491368 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 23

Conread position: 7-282
Cow position: chr7:6626869-6626589 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 23

Conread position: 7-288
Cow position: chr7:52802091-52801807 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 37, 180

Conread position: 7-290
Cow position: chr7:2410174-2410455 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 13, 23

Conread position: 7-290
Cow position: chr7:64011929-64012217 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 14, 23

Conread position: 7-295
Cow position: chr7:13405-13114 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 188
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 135

Conread position: 7-295
Cow position: chr7:19044705-19044410 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 15, 23

Conread position: 7-295
Cow position: chr7:37417484-37417778 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 28

Conread position: 7-295
Cow position: chr7:46194751-46194457 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 7-295
Cow position: chr7:54692932-54693226 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 43, 176

Conread position: 7-302
Cow position: chr7:19168970-19168669 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 23

Conread position: 7-302
Cow position: chr7:20535226-20535517 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 15, 23

Conread position: 7-314
Cow position: chr7:547356-547655 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 14, 23

Conread position: 7-328
Cow position: chr7:48637226-48637555 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 229
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 132

Conread position: 7-334
Cow position: chr7:49604065-49603723 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 14, 23

Conread position: 7-334
Cow position: chr7:57025548-57025218 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 23

Conread position: 7-342
Cow position: chr7:1442331-1441981 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 14, 23

Conread position: 7-342
Cow position: chr7:6666005-6666354 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 233
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 23

Conread position: 7-342
Cow position: chr7:8337883-8338233 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 244
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 23

Conread position: 7-342
Cow position: chr7:20151208-20150862 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 232
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 172

Conread position: 7-342
Cow position: chr7:21316661-21317005 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 237
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 102, 45

Conread position: 7-342
Cow position: chr7:21424861-21424511 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 23

Conread position: 7-342
Cow position: chr7:33069996-33069648 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 43, 197

Conread position: 7-342
Cow position: chr7:37165367-37165716 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 14, 23

Conread position: 7-342
Cow position: chr7:58349532-58349189 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 23

Conread position: 7-342
Cow position: chr7:60465224-60465567 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 232
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 23

Conread position: 7-342
Cow position: chr7:61577630-61577281 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 23

Conread position: 7-342
Cow position: chr7:67431064-67431392 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 238
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 133

Conread position: 7-343
Cow position: chr7:46265672-46266019 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 236
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 14, 23

Conread position: 9-297
Cow position: chr7:50880584-50880861 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 78, 25

Conread position: 9-342
Cow position: chr7:32186227-32185896 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 223
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 35, 46

Conread position: 13-347
Cow position: chr7:43240471-43240131 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 16

Conread position: 14-329
Cow position: chr7:13779406-13779722 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 15

Conread position: 15-341
Cow position: chr7:100048-99709 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 12

Conread position: 15-342
Cow position: chr7:68868773-68869116 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 28, 14

Conread position: 16-295
Cow position: chr7:65327215-65326941 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 20

Conread position: 19-342
Cow position: chr7:27107238-27106900 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 31, 10

Conread position: 20-333
Cow position: chr7:3157818-3158142 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 33, 9

Conread position: 20-341
Cow position: chr7:443740-443407 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr7:195380-195050 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr7:8142454-8142119 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr7:11421062-11420726 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr7:13531387-13531052 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr7:21989153-21989489 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr7:24421878-24422207 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 223
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr7:34151465-34151798 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 232
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 9

Conread position: 20-342
Cow position: chr7:39794374-39794719 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr7:45946336-45946001 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 238
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr7:46748504-46748841 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr7:47191223-47190887 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr7:49071490-49071136 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr7:59773833-59774165 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 30, 9

Conread position: 20-342
Cow position: chr7:60727938-60727602 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 15

Conread position: 20-342
Cow position: chr7:61624153-61623836 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 86, 9

Conread position: 20-342
Cow position: chr7:62951863-62952201 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 88, 9

Conread position: 20-342
Cow position: chr7:66907769-66908098 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 9

Conread position: 21-310
Cow position: chr7:18855687-18855981 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 29, 8

Conread position: 25-342
Cow position: chr7:1368173-1367841 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 0

Conread position: 28-273
Cow position: chr7:51016761-51017004 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 79, 24

Conread position: 28-290
Cow position: chr7:54547740-54547474 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 22, 118

Conread position: 28-293
Cow position: chr7:67496753-67497025 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 21, 105

Conread position: 28-295
Cow position: chr7:3298143-3297881 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 89

Conread position: 28-295
Cow position: chr7:19882949-19882676 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 0

Conread position: 28-342
Cow position: chr7:40264672-40264350 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 28-342
Cow position: chr7:67586333-67586015 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 209
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 22, 151

Conread position: 29-288
Cow position: chr7:34414529-34414264 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 29-341
Cow position: chr7:27711927-27712251 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 223
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 21, 161

Conread position: 29-342
Cow position: chr7:5305461-5305132 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 223
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 30-295
Cow position: chr7:42428128-42428396 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 20, 38

Conread position: 30-342
Cow position: chr7:3127832-3128159 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 20, 0

Conread position: 42-171
Cow position: chr7:3807570-3807698 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 58-290
Cow position: chr7:66011173-66011410 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 69-287
Cow position: chr7:59686556-59686774 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 111

Conread position: 69-334
Cow position: chr7:48813691-48813969 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 71-342
Cow position: chr7:955211-955496 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 5

Conread position: 73-290
Cow position: chr7:49847352-49847136 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 34, 56

Conread position: 73-342
Cow position: chr7:61424955-61424682 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 151

Conread position: 74-342
Cow position: chr7:49403981-49403706 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 72

Conread position: 86-342
Cow position: chr7:21428536-21428275 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 26

Conread position: 92-342
Cow position: chr7:67671982-67671736 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 207, 25

Conread position: 142-342
Cow position: chr7:48861048-48860842 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 113, 9

Conread position: 152-342
Cow position: chr7:66235181-66234985 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 100, 124

Conread position: 200-342
Cow position: chr7:41532402-41532553 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 9

Show alignments to all cow chromosomes.