Cow genome map
| Conread name: | Emb1-C0005179_B14 |
| Conread position: | 1-198 |
| Cow position: | chr8:9669889-9670090 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 17, 7 |
| Conread position: | 1-295 |
| Cow position: | chr8:47360044-47359752 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 1-296 |
| Cow position: | chr8:33691680-33691970 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 1-335 |
| Cow position: | chr8:7679831-7680174 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 1-342 |
| Cow position: | chr8:16759107-16758775 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 1-342 |
| Cow position: | chr8:42541757-42541408 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 2-342 |
| Cow position: | chr8:6750334-6749986 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 7 |
| Conread position: | 6-295 |
| Cow position: | chr8:18658064-18657768 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 27, 141 |
| Conread position: | 7-218 |
| Cow position: | chr8:12663258-12663045 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 15, 26 |
| Conread position: | 7-275 |
| Cow position: | chr8:5680474-5680215 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-286 |
| Cow position: | chr8:32649392-32649661 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-295 |
| Cow position: | chr8:1016849-1017143 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 7-295 |
| Cow position: | chr8:6203594-6203304 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-295 |
| Cow position: | chr8:8554025-8553735 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 43, 135 |
| Conread position: | 7-295 |
| Cow position: | chr8:10751033-10751326 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-295 |
| Cow position: | chr8:15223500-15223790 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-295 |
| Cow position: | chr8:24230120-24230414 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 7-295 |
| Cow position: | chr8:34406234-34406522 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 43, 206 |
| Conread position: | 7-295 |
| Cow position: | chr8:47489523-47489229 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 7-333 |
| Cow position: | chr8:46481603-46481271 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 43, 67 |
| Conread position: | 7-334 |
| Cow position: | chr8:17995228-17994897 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr8:1116890-1116546 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 111, 45 |
| Conread position: | 7-342 |
| Cow position: | chr8:1569811-1570161 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 7-342 |
| Cow position: | chr8:4272962-4273308 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr8:30156793-30157142 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr8:30490237-30489887 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr8:47888551-47888891 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 43, 205 |
| Conread position: | 7-342 |
| Cow position: | chr8:49285372-49285024 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 7-342 |
| Cow position: | chr8:55302605-55302942 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 9-342 |
| Cow position: | chr8:58855379-58855721 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 245 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 12-342 |
| Cow position: | chr8:29010344-29010682 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 155 |
| Conread position: | 13-342 |
| Cow position: | chr8:1346261-1345925 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 15-231 |
| Cow position: | chr8:35544356-35544574 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 16-221 |
| Cow position: | chr8:37267244-37267453 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 16-342 |
| Cow position: | chr8:9994175-9994500 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 16-342 |
| Cow position: | chr8:38603326-38603003 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 17-342 |
| Cow position: | chr8:20675861-20675523 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 227 |
| Conread position: | 20-289 |
| Cow position: | chr8:39580047-39580313 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-296 |
| Cow position: | chr8:38088678-38088951 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 105, 9 |
| Conread position: | 20-299 |
| Cow position: | chr8:11764659-11764935 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-341 |
| Cow position: | chr8:25413324-25413647 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 20-342 |
| Cow position: | chr8:3854328-3853996 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr8:4689104-4689438 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr8:5019716-5020047 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr8:7164057-7164386 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr8:12451757-12452093 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr8:14926183-14925848 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 20-342 |
| Cow position: | chr8:23773340-23773675 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 20-342 |
| Cow position: | chr8:38393337-38393673 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr8:42486613-42486947 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 20-342 |
| Cow position: | chr8:47659617-47659292 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 9 |
| Conread position: | 20-342 |
| Cow position: | chr8:50928401-50928065 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr8:51062426-51062105 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 23-342 |
| Cow position: | chr8:27154425-27154093 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 250 |
| Conread position: | 28-295 |
| Cow position: | chr8:8523529-8523801 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 22, 89 |
| Conread position: | 28-295 |
| Cow position: | chr8:32629301-32629028 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 118 |
| Conread position: | 28-302 |
| Cow position: | chr8:5244699-5244423 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 28-341 |
| Cow position: | chr8:61520811-61521132 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 33, 24 |
| Conread position: | 28-342 |
| Cow position: | chr8:1467837-1468166 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 22, 119 |
| Conread position: | 28-343 |
| Cow position: | chr8:40550567-40550255 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 23, 79 |
| Conread position: | 29-342 |
| Cow position: | chr8:14630517-14630189 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 29-342 |
| Cow position: | chr8:49219655-49219983 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 29-342 |
| Cow position: | chr8:55087247-55087581 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 21, 155 |
| Conread position: | 30-339 |
| Cow position: | chr8:14589158-14588838 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 34-295 |
| Cow position: | chr8:51254930-51254665 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 40-228 |
| Cow position: | chr8:21207298-21207487 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 15 |
| Conread position: | 42-341 |
| Cow position: | chr8:48789907-48790216 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 66, 159 |
| Conread position: | 50-295 |
| Cow position: | chr8:21042471-21042721 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 58, 132 |
| Conread position: | 58-295 |
| Cow position: | chr8:54014196-54014438 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 67, 124 |
| Conread position: | 58-341 |
| Cow position: | chr8:13633522-13633808 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 105 |
| Conread position: | 193-342 |
| Cow position: | chr8:6371112-6370954 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 100 |
| Conread position: | 210-342 |
| Cow position: | chr8:51905712-51905580 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 30 |
Show alignments to all cow chromosomes.