Cow genome map


           Conread name:
           Emb1-C0005179_B14
        

               Conread position:
               1-275
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 7
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               49, 27
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               49, 169
               

               Conread position:
               1-332
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               49, 7
               

               Conread position:
               1-340
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               2-243
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               17, 6
               

               Conread position:
               2-340
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               249
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               19, 6
               

               Conread position:
               2-342
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 6
               

               Conread position:
               4-342
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 29
               

               Conread position:
               7-235
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 139
               

               Conread position:
               7-242
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-260
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               7-277
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               7-278
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               7-288
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               7-289
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               14, 24
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 29
               

               Conread position:
               7-319
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               43, 29
               

               Conread position:
               7-328
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               90, 22
               

               Conread position:
               7-330
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               239
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-334
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-339
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               43, 59
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               246
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               237
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               101, 349
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               14, 21
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               249
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-342
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-343
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               7-343
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               7-343
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               7-347
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               13, 150
               

               Conread position:
               8-295
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               8-341
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               8-342
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 28
               

               Conread position:
               11-342
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               13-294
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               16-289
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               16-295
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               17-278
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               20-295
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-333
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-340
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               237
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               30, 14
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               88, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               20-342
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               21-342
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               28-295
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 93
               

               Conread position:
               28-297
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               28-342
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 25
               

               Conread position:
               29-295
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               29-341
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               80, 23
               

               Conread position:
               29-342
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               21, 89
               

               Conread position:
               29-347
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               36-320
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               14, 144
               

               Conread position:
               36-341
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               14, 159
               

               Conread position:
               40-337
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               71, 95
               

               Conread position:
               42-294
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               42-342
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               56-295
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               50, 86
               

               Conread position:
               81-300
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               170, 123
               

               Conread position:
               82-341
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               105-342
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               186, 78
               
Show alignments to all cow chromosomes.