Cow genome map
| Conread name: | Emb1-C0005179_B14 |
| Conread position: | 1-275 |
| Cow position: | chr9:9327699-9327421 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 1-287 |
| Cow position: | chr9:10746304-10746017 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 1-295 |
| Cow position: | chr9:63670809-63671106 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 27 |
| Conread position: | 1-310 |
| Cow position: | chr9:791976-791669 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 49, 169 |
| Conread position: | 1-332 |
| Cow position: | chr9:16516093-16516439 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 49, 7 |
| Conread position: | 1-340 |
| Cow position: | chr9:27929810-27930158 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 2-243 |
| Cow position: | chr9:47812114-47812338 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 17, 6 |
| Conread position: | 2-340 |
| Cow position: | chr9:62716876-62717217 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 19, 6 |
| Conread position: | 2-342 |
| Cow position: | chr9:39729246-39728896 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 6 |
| Conread position: | 4-342 |
| Cow position: | chr9:31061063-31061410 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 7-235 |
| Cow position: | chr9:2518611-2518378 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 139 |
| Conread position: | 7-242 |
| Cow position: | chr9:3577141-3576905 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-260 |
| Cow position: | chr9:1983159-1983418 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 7-277 |
| Cow position: | chr9:22473947-22473671 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 7-278 |
| Cow position: | chr9:6921413-6921136 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 7-288 |
| Cow position: | chr9:60324639-60324365 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 7-289 |
| Cow position: | chr9:50326186-50326474 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-295 |
| Cow position: | chr9:1249652-1249362 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-295 |
| Cow position: | chr9:1639086-1639376 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 14, 24 |
| Conread position: | 7-295 |
| Cow position: | chr9:1992194-1991900 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-295 |
| Cow position: | chr9:26421634-26421340 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 7-295 |
| Cow position: | chr9:28024151-28024450 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-295 |
| Cow position: | chr9:30829097-30829387 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 7-295 |
| Cow position: | chr9:35544187-35543893 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 43, 176 |
| Conread position: | 7-295 |
| Cow position: | chr9:44167936-44168225 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-295 |
| Cow position: | chr9:59508821-59508538 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 29 |
| Conread position: | 7-319 |
| Cow position: | chr9:2526632-2526948 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 29 |
| Conread position: | 7-328 |
| Cow position: | chr9:20314557-20314892 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 7-330 |
| Cow position: | chr9:8739154-8738818 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-334 |
| Cow position: | chr9:778474-778133 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-339 |
| Cow position: | chr9:29788326-29787970 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 43, 59 |
| Conread position: | 7-342 |
| Cow position: | chr9:4648284-4647958 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr9:4941148-4940808 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr9:7059721-7059371 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr9:10856364-10856711 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 246 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr9:14002384-14002731 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr9:17632814-17633168 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 101, 349 |
| Conread position: | 7-342 |
| Cow position: | chr9:18507485-18507133 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr9:26276999-26277345 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr9:26738359-26738712 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 7-342 |
| Cow position: | chr9:31113497-31113845 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 249 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr9:33950867-33950517 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr9:34240758-34240408 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 241 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-342 |
| Cow position: | chr9:56176116-56176461 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-343 |
| Cow position: | chr9:202949-202598 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 7-343 |
| Cow position: | chr9:999806-1000157 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 7-343 |
| Cow position: | chr9:27487532-27487190 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 7-347 |
| Cow position: | chr9:27897361-27897709 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 13, 150 |
| Conread position: | 8-295 |
| Cow position: | chr9:45875862-45876155 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 8-341 |
| Cow position: | chr9:19078000-19078349 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 8-342 |
| Cow position: | chr9:24979311-24978974 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 28 |
| Conread position: | 11-342 |
| Cow position: | chr9:15986409-15986736 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 13-294 |
| Cow position: | chr9:9312970-9312682 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 16-289 |
| Cow position: | chr9:47262952-47262677 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 16-295 |
| Cow position: | chr9:4718926-4719194 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 17-278 |
| Cow position: | chr9:31093720-31093466 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 12 |
| Conread position: | 20-295 |
| Cow position: | chr9:5006332-5006608 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-333 |
| Cow position: | chr9:43302864-43302537 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-340 |
| Cow position: | chr9:22655169-22655502 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr9:6251626-6251962 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr9:7005074-7005410 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 20-342 |
| Cow position: | chr9:10939079-10939415 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr9:16177950-16178286 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr9:17303611-17303281 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 20-342 |
| Cow position: | chr9:21411665-21412003 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr9:27782535-27782199 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr9:30674426-30674766 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 20-342 |
| Cow position: | chr9:52722781-52723097 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 21-342 |
| Cow position: | chr9:12726816-12727122 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 28-295 |
| Cow position: | chr9:2630964-2631220 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 28-297 |
| Cow position: | chr9:1098956-1099231 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 28-342 |
| Cow position: | chr9:10110017-10110330 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 25 |
| Conread position: | 29-295 |
| Cow position: | chr9:19156917-19156649 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 29-341 |
| Cow position: | chr9:26280220-26280538 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 80, 23 |
| Conread position: | 29-342 |
| Cow position: | chr9:9015438-9015765 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 21, 89 |
| Conread position: | 29-347 |
| Cow position: | chr9:31809946-31810277 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 36-320 |
| Cow position: | chr9:28003918-28004202 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 144 |
| Conread position: | 36-341 |
| Cow position: | chr9:59480478-59480158 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 14, 159 |
| Conread position: | 40-337 |
| Cow position: | chr9:35747495-35747193 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 71, 95 |
| Conread position: | 42-294 |
| Cow position: | chr9:9648582-9648831 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 42-342 |
| Cow position: | chr9:9560879-9560572 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 23, 49 |
| Conread position: | 56-295 |
| Cow position: | chr9:2102210-2102446 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 50, 86 |
| Conread position: | 81-300 |
| Cow position: | chr9:4659743-4659528 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 170, 123 |
| Conread position: | 82-341 |
| Cow position: | chr9:5516612-5516887 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 105-342 |
| Cow position: | chr9:53530177-53530413 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 186, 78 |
Show alignments to all cow chromosomes.