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Cow genome map

           
Conread name:
           
Emb1-C0005180_O01
        

               
Conread position:
               
21-367
               

               
Cow position:
               
chr25:2110698-2111038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
21-389
               

               
Cow position:
               
chr25:5341264-5341647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
16, 303
               

               
Conread position:
               
25-393
               

               
Cow position:
               
chr25:25754378-25754002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 120
               

               
Conread position:
               
25-395
               

               
Cow position:
               
chr25:20020350-20020001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
25-395
               

               
Cow position:
               
chr25:26654525-26654909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
25-395
               

               
Cow position:
               
chr25:36779113-36779499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
25-397
               

               
Cow position:
               
chr25:8120394-8120783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 332
               

               
Conread position:
               
25-397
               

               
Cow position:
               
chr25:22314818-22315205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 300
               

               
Conread position:
               
26-325
               

               
Cow position:
               
chr25:36746827-36746513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
11, 121
               

               
Conread position:
               
26-332
               

               
Cow position:
               
chr25:21209328-21209014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 106
               

               
Conread position:
               
26-345
               

               
Cow position:
               
chr25:6740439-6740765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
11, 225
               

               
Conread position:
               
26-358
               

               
Cow position:
               
chr25:40388835-40388502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
26-363
               

               
Cow position:
               
chr25:6891909-6891558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 238
               

               
Conread position:
               
26-363
               

               
Cow position:
               
chr25:32191287-32191636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 147
               

               
Conread position:
               
26-372
               

               
Cow position:
               
chr25:30852392-30852730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
11, 170
               

               
Conread position:
               
26-373
               

               
Cow position:
               
chr25:23410283-23410642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
26-385
               

               
Cow position:
               
chr25:10012435-10012056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
26-394
               

               
Cow position:
               
chr25:5514628-5515011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 103
               

               
Conread position:
               
26-395
               

               
Cow position:
               
chr25:1735692-1735322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 121
               

               
Conread position:
               
26-395
               

               
Cow position:
               
chr25:5792184-5791802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
26-395
               

               
Cow position:
               
chr25:12235135-12234763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
26-395
               

               
Cow position:
               
chr25:13569549-13569174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 232
               

               
Conread position:
               
26-395
               

               
Cow position:
               
chr25:16922175-16921799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 139
               

               
Conread position:
               
26-395
               

               
Cow position:
               
chr25:20076117-20076495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 83
               

               
Conread position:
               
26-395
               

               
Cow position:
               
chr25:21193325-21192931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
26-395
               

               
Cow position:
               
chr25:37594016-37594404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
11, 301
               

               
Conread position:
               
26-396
               

               
Cow position:
               
chr25:35347523-35347903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
26-397
               

               
Cow position:
               
chr25:2135982-2136359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
26-397
               

               
Cow position:
               
chr25:4548104-4547718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
11, 125
               

               
Conread position:
               
26-397
               

               
Cow position:
               
chr25:11585131-11585518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
26-397
               

               
Cow position:
               
chr25:20069345-20069721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
26-397
               

               
Cow position:
               
chr25:22530907-22531283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 205
               

               
Conread position:
               
28-328
               

               
Cow position:
               
chr25:18490698-18491007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 78
               

               
Conread position:
               
28-393
               

               
Cow position:
               
chr25:20403098-20402713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
28-397
               

               
Cow position:
               
chr25:4522196-4521837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 193
               

               
Conread position:
               
29-369
               

               
Cow position:
               
chr25:24727164-24726809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 54
               

               
Conread position:
               
29-392
               

               
Cow position:
               
chr25:12824408-12824022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 238
               

               
Conread position:
               
29-394
               

               
Cow position:
               
chr25:27868432-27868801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
29-395
               

               
Cow position:
               
chr25:8576321-8576692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
8, 62
               

               
Conread position:
               
30-388
               

               
Cow position:
               
chr25:20394830-20395183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 150
               

               
Conread position:
               
30-393
               

               
Cow position:
               
chr25:23389649-23389282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
31-290
               

               
Cow position:
               
chr25:25866561-25866818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
132, 99
               

               
Conread position:
               
31-334
               

               
Cow position:
               
chr25:18885856-18885544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
31-342
               

               
Cow position:
               
chr25:35446570-35446884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 119
               

               
Conread position:
               
31-345
               

               
Cow position:
               
chr25:13840492-13840163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
31-345
               

               
Cow position:
               
chr25:34659480-34659151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
31-356
               

               
Cow position:
               
chr25:20060404-20060068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
31-357
               

               
Cow position:
               
chr25:33839012-33839341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 210
               

               
Conread position:
               
31-363
               

               
Cow position:
               
chr25:20496164-20496502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
31-363
               

               
Cow position:
               
chr25:26282654-26282991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 113
               

               
Conread position:
               
31-364
               

               
Cow position:
               
chr25:18160937-18161254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
31-368
               

               
Cow position:
               
chr25:14954401-14954047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
19, 182
               

               
Conread position:
               
31-372
               

               
Cow position:
               
chr25:8572246-8571892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
19, 331
               

               
Conread position:
               
31-373
               

               
Cow position:
               
chr25:24654545-24654184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 339
               

               
Conread position:
               
31-373
               

               
Cow position:
               
chr25:28863499-28863853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 138
               

               
Conread position:
               
31-373
               

               
Cow position:
               
chr25:34502057-34501708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
19, 327
               

               
Conread position:
               
31-378
               

               
Cow position:
               
chr25:13333050-13333405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
31-385
               

               
Cow position:
               
chr25:24136819-24136445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
31-385
               

               
Cow position:
               
chr25:36765671-36765311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 139
               

               
Conread position:
               
31-392
               

               
Cow position:
               
chr25:13325226-13325575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 122
               

               
Conread position:
               
31-393
               

               
Cow position:
               
chr25:6464404-6464033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
31-393
               

               
Cow position:
               
chr25:7216446-7216828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 304
               

               
Conread position:
               
31-393
               

               
Cow position:
               
chr25:11666292-11666644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
31-393
               

               
Cow position:
               
chr25:15319554-15319916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
31-394
               

               
Cow position:
               
chr25:18564116-18564484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 225
               

               
Conread position:
               
31-395
               

               
Cow position:
               
chr25:787897-788262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
31-395
               

               
Cow position:
               
chr25:7641824-7641452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
31-395
               

               
Cow position:
               
chr25:10504712-10504339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 61
               

               
Conread position:
               
31-395
               

               
Cow position:
               
chr25:14225172-14224805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 220
               

               
Conread position:
               
31-395
               

               
Cow position:
               
chr25:25827087-25827469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
31-395
               

               
Cow position:
               
chr25:26087140-26087517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
31-395
               

               
Cow position:
               
chr25:31733106-31732736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 62
               

               
Conread position:
               
31-395
               

               
Cow position:
               
chr25:36124324-36124683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
31-395
               

               
Cow position:
               
chr25:36761740-36762103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
31-396
               

               
Cow position:
               
chr25:9349633-9349282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 201
               

               
Conread position:
               
31-397
               

               
Cow position:
               
chr25:2414461-2414815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
31-397
               

               
Cow position:
               
chr25:11437178-11436807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 278
               

               
Conread position:
               
31-397
               

               
Cow position:
               
chr25:14791380-14791757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
31-397
               

               
Cow position:
               
chr25:24572696-24573068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 224
               

               
Conread position:
               
32-370
               

               
Cow position:
               
chr25:5756316-5756668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 304
               

               
Conread position:
               
32-395
               

               
Cow position:
               
chr25:1837868-1838235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
32-395
               

               
Cow position:
               
chr25:33255997-33256352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 83
               

               
Conread position:
               
32-397
               

               
Cow position:
               
chr25:11054555-11054904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
32-397
               

               
Cow position:
               
chr25:14834043-14833664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 70
               

               
Conread position:
               
33-359
               

               
Cow position:
               
chr25:35608100-35607758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
33-366
               

               
Cow position:
               
chr25:10748874-10748523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
24, 113
               

               
Conread position:
               
33-373
               

               
Cow position:
               
chr25:25510521-25510870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 103
               

               
Conread position:
               
33-386
               

               
Cow position:
               
chr25:37687532-37687188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
35-344
               

               
Cow position:
               
chr25:27621711-27622037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
15, 163
               

               
Conread position:
               
36-394
               

               
Cow position:
               
chr25:5847164-5846812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
141, 88
               

               
Conread position:
               
36-394
               

               
Cow position:
               
chr25:18294686-18294317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 208
               

               
Conread position:
               
36-397
               

               
Cow position:
               
chr25:3992419-3992785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 280
               

               
Conread position:
               
38-372
               

               
Cow position:
               
chr25:40657932-40658276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
69, 111
               

               
Conread position:
               
40-393
               

               
Cow position:
               
chr25:6683427-6683066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
42-302
               

               
Cow position:
               
chr25:9842642-9842910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
132, 83
               

               
Conread position:
               
43-300
               

               
Cow position:
               
chr25:14103934-14104190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
7, 88
               

               
Conread position:
               
46-395
               

               
Cow position:
               
chr25:41354660-41354307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
45, 39
               

               
Conread position:
               
47-394
               

               
Cow position:
               
chr25:33664252-33663908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 38
               

               
Conread position:
               
48-393
               

               
Cow position:
               
chr25:9396098-9396441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 120
               

               
Conread position:
               
48-394
               

               
Cow position:
               
chr25:16064541-16064889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 67
               

               
Conread position:
               
49-280
               

               
Cow position:
               
chr25:33025436-33025200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
123, 87
               

               
Conread position:
               
49-336
               

               
Cow position:
               
chr25:26238513-26238811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
49-345
               

               
Cow position:
               
chr25:11269554-11269249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
49-345
               

               
Cow position:
               
chr25:17598847-17598540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
49-366
               

               
Cow position:
               
chr25:26111926-26112239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 112
               

               
Conread position:
               
49-372
               

               
Cow position:
               
chr25:35567242-35566908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
128, 312
               

               
Conread position:
               
49-385
               

               
Cow position:
               
chr25:13960711-13961054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
131, 90
               

               
Conread position:
               
49-393
               

               
Cow position:
               
chr25:33959615-33959257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 50
               

               
Conread position:
               
49-395
               

               
Cow position:
               
chr25:12204113-12204474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
49-395
               

               
Cow position:
               
chr25:21950770-21951123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 282
               

               
Conread position:
               
49-395
               

               
Cow position:
               
chr25:40957342-40956986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 163
               

               
Conread position:
               
49-397
               

               
Cow position:
               
chr25:17658259-17658611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 158
               

               
Conread position:
               
50-395
               

               
Cow position:
               
chr25:10137751-10138092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
50-397
               

               
Cow position:
               
chr25:9641989-9642358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
83, 256
               

               
Conread position:
               
51-374
               

               
Cow position:
               
chr25:26757077-26757416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
72, 176
               

               
Conread position:
               
51-397
               

               
Cow position:
               
chr25:11662169-11661818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 82
               

               
Conread position:
               
59-395
               

               
Cow position:
               
chr25:18293425-18293751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
196, 73
               

               
Conread position:
               
63-393
               

               
Cow position:
               
chr25:12239478-12239151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 20
               

               
Conread position:
               
63-393
               

               
Cow position:
               
chr25:41363481-41363154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
162, 46
               

               
Conread position:
               
63-397
               

               
Cow position:
               
chr25:21245948-21245604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 238
               

               
Conread position:
               
63-397
               

               
Cow position:
               
chr25:38981765-38982098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 132
               

               
Conread position:
               
66-308
               

               
Cow position:
               
chr25:15273351-15273601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
66-344
               

               
Cow position:
               
chr25:17354040-17354327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 190
               

               
Conread position:
               
66-375
               

               
Cow position:
               
chr25:38972494-38972813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
111, 146
               

               
Conread position:
               
69-361
               

               
Cow position:
               
chr25:9634587-9634870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 56
               

               
Conread position:
               
69-394
               

               
Cow position:
               
chr25:27531604-27531282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
77, 247
               

               
Conread position:
               
69-395
               

               
Cow position:
               
chr25:2498927-2499270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
106, 40
               

               
Conread position:
               
70-395
               

               
Cow position:
               
chr25:9957369-9957040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 151
               

               
Conread position:
               
70-397
               

               
Cow position:
               
chr25:36037125-36036779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 279
               

               
Conread position:
               
73-374
               

               
Cow position:
               
chr25:41351534-41351228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
77-394
               

               
Cow position:
               
chr25:15694655-15694979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 159
               

               
Conread position:
               
79-397
               

               
Cow position:
               
chr25:6886294-6885971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 53
               

               
Conread position:
               
84-325
               

               
Cow position:
               
chr25:17975688-17975438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
84-379
               

               
Cow position:
               
chr25:6424902-6424601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
87-370
               

               
Cow position:
               
chr25:15391646-15391353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
102, 66
               

               
Conread position:
               
89-396
               

               
Cow position:
               
chr25:25051700-25051379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
90-384
               

               
Cow position:
               
chr25:27821095-27821405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
56, 285
               

               
Conread position:
               
90-385
               

               
Cow position:
               
chr25:9743910-9744217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
73, 50
               

               
Conread position:
               
90-392
               

               
Cow position:
               
chr25:23053242-23053552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 9
               

               
Conread position:
               
90-394
               

               
Cow position:
               
chr25:9023330-9023630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 102
               

               
Conread position:
               
90-394
               

               
Cow position:
               
chr25:12097528-12097837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 43
               

               
Conread position:
               
93-345
               

               
Cow position:
               
chr25:20460819-20461077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
93-390
               

               
Cow position:
               
chr25:12817061-12817368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 212
               

               
Conread position:
               
96-386
               

               
Cow position:
               
chr25:8347200-8347500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
96-390
               

               
Cow position:
               
chr25:18721417-18721124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 123
               

               
Conread position:
               
98-345
               

               
Cow position:
               
chr25:23407151-23406888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
98-397
               

               
Cow position:
               
chr25:15714574-15714873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
84, 204
               

               
Conread position:
               
99-356
               

               
Cow position:
               
chr25:25961656-25961921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
50, 209
               

               
Conread position:
               
101-356
               

               
Cow position:
               
chr25:2194647-2194903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
107-394
               

               
Cow position:
               
chr25:16319424-16319143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 38
               

               
Conread position:
               
108-369
               

               
Cow position:
               
chr25:41364276-41364013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 144
               

               
Conread position:
               
109-332
               

               
Cow position:
               
chr25:448641-448408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
109-395
               

               
Cow position:
               
chr25:6474396-6474089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
40, 191
               

               
Conread position:
               
111-396
               

               
Cow position:
               
chr25:14117815-14118094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
66, 137
               

               
Conread position:
               
118-397
               

               
Cow position:
               
chr25:21895174-21894884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 250
               

               
Conread position:
               
119-351
               

               
Cow position:
               
chr25:10746616-10746853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
16, 185
               

               
Conread position:
               
121-334
               

               
Cow position:
               
chr25:20348574-20348800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
122-295
               

               
Cow position:
               
chr25:10330677-10330500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
119, 59
               

               
Conread position:
               
126-397
               

               
Cow position:
               
chr25:20023678-20023386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
127-369
               

               
Cow position:
               
chr25:10366030-10365780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
130-393
               

               
Cow position:
               
chr25:41384357-41384084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 100
               

               
Conread position:
               
130-395
               

               
Cow position:
               
chr25:36081600-36081875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
132-304
               

               
Cow position:
               
chr25:14266775-14266595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
132-374
               

               
Cow position:
               
chr25:30035279-30035525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
132-395
               

               
Cow position:
               
chr25:14512843-14513112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 231
               

               
Conread position:
               
132-395
               

               
Cow position:
               
chr25:36535705-36535435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 68
               

               
Conread position:
               
134-395
               

               
Cow position:
               
chr25:22297288-22297023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
40, 229
               

               
Conread position:
               
135-333
               

               
Cow position:
               
chr25:21266736-21266947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
135-336
               

               
Cow position:
               
chr25:17702233-17702030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
40, 102
               

               
Conread position:
               
135-347
               

               
Cow position:
               
chr25:17712264-17712488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
135-369
               

               
Cow position:
               
chr25:9990361-9990125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
14, 182
               

               
Conread position:
               
135-385
               

               
Cow position:
               
chr25:8225837-8226092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
135-394
               

               
Cow position:
               
chr25:22203960-22203689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
42, 208
               

               
Conread position:
               
135-395
               

               
Cow position:
               
chr25:14196585-14196859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
135-395
               

               
Cow position:
               
chr25:26700770-26701028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 84
               

               
Conread position:
               
136-262
               

               
Cow position:
               
chr25:8961194-8961324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
136-284
               

               
Cow position:
               
chr25:10156322-10156477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
136-307
               

               
Cow position:
               
chr25:433345-433162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
136-310
               

               
Cow position:
               
chr25:18935144-18934958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
136-328
               

               
Cow position:
               
chr25:24168167-24167969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
105, 32
               

               
Conread position:
               
136-395
               

               
Cow position:
               
chr25:8512360-8512089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
136-395
               

               
Cow position:
               
chr25:11131316-11131582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
116, 214
               

               
Conread position:
               
136-395
               

               
Cow position:
               
chr25:33978470-33978215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
41, 90
               

               
Conread position:
               
136-395
               

               
Cow position:
               
chr25:35332902-35333157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
136-397
               

               
Cow position:
               
chr25:40321561-40321287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
37, 159
               

               
Conread position:
               
137-397
               

               
Cow position:
               
chr25:35612571-35612313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
12, 101
               

               
Conread position:
               
138-393
               

               
Cow position:
               
chr25:9754342-9754100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
138-395
               

               
Cow position:
               
chr25:13642585-13642314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
11, 240
               

               
Conread position:
               
138-395
               

               
Cow position:
               
chr25:29215653-29215389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
36, 208
               

               
Conread position:
               
138-395
               

               
Cow position:
               
chr25:35344771-35345029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 151
               

               
Conread position:
               
138-395
               

               
Cow position:
               
chr25:35625438-35625186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
139-395
               

               
Cow position:
               
chr25:28188216-28187947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 260
               

               
Conread position:
               
142-347
               

               
Cow position:
               
chr25:12778797-12778583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
32, 177
               

               
Conread position:
               
142-393
               

               
Cow position:
               
chr25:17566324-17566583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
35, 220
               

               
Conread position:
               
145-357
               

               
Cow position:
               
chr25:11139390-11139610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
145-370
               

               
Cow position:
               
chr25:9961438-9961196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
145-388
               

               
Cow position:
               
chr25:24452428-24452184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
145-394
               

               
Cow position:
               
chr25:31230483-31230242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
145-397
               

               
Cow position:
               
chr25:19679082-19679355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
30, 164
               

               
Conread position:
               
146-395
               

               
Cow position:
               
chr25:18265905-18266161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
146-395
               

               
Cow position:
               
chr25:18988121-18988388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
148-318
               

               
Cow position:
               
chr25:12117243-12117066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
148-385
               

               
Cow position:
               
chr25:7306041-7306293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
148-393
               

               
Cow position:
               
chr25:9269116-9269344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
148-395
               

               
Cow position:
               
chr25:7581684-7581433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
25, 221
               

               
Conread position:
               
148-397
               

               
Cow position:
               
chr25:8918535-8918276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 180
               

               
Conread position:
               
148-397
               

               
Cow position:
               
chr25:33550249-33550509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
29, 157
               

               
Conread position:
               
149-394
               

               
Cow position:
               
chr25:18487418-18487665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
150-395
               

               
Cow position:
               
chr25:33691299-33691557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
23, 184
               

               
Conread position:
               
150-397
               

               
Cow position:
               
chr25:20785836-20785586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
20, 127
               

               
Conread position:
               
151-372
               

               
Cow position:
               
chr25:36026753-36026985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
151-395
               

               
Cow position:
               
chr25:38135493-38135748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
23, 216
               

               
Conread position:
               
152-356
               

               
Cow position:
               
chr25:16400503-16400302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
153-397
               

               
Cow position:
               
chr25:24669682-24669438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
20, 202
               

               
Conread position:
               
155-364
               

               
Cow position:
               
chr25:20085037-20085251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 193
               

               
Conread position:
               
155-396
               

               
Cow position:
               
chr25:20211336-20211081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
22, 145
               

               
Conread position:
               
156-395
               

               
Cow position:
               
chr25:24405985-24405735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
21, 236
               

               
Conread position:
               
165-383
               

               
Cow position:
               
chr25:11978934-11978714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
168-313
               

               
Cow position:
               
chr25:19478454-19478608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 131
               

               
Conread position:
               
168-392
               

               
Cow position:
               
chr25:1762874-1763086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
115, 66
               

               
Conread position:
               
168-393
               

               
Cow position:
               
chr25:21289106-21289342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 212
               

               
Conread position:
               
168-395
               

               
Cow position:
               
chr25:38425132-38425359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
104, 192
               

               
Conread position:
               
170-320
               

               
Cow position:
               
chr25:16316666-16316818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
170-338
               

               
Cow position:
               
chr25:19576670-19576502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 100
               

               
Conread position:
               
170-348
               

               
Cow position:
               
chr25:24008408-24008222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
170-356
               

               
Cow position:
               
chr25:6256169-6255976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
170-371
               

               
Cow position:
               
chr25:15286771-15286569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
76, 137
               

               
Conread position:
               
170-387
               

               
Cow position:
               
chr25:12840949-12840733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
60, 115
               

               
Conread position:
               
170-393
               

               
Cow position:
               
chr25:12293982-12293751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
65, 143
               

               
Conread position:
               
170-394
               

               
Cow position:
               
chr25:26338214-26338449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
170-395
               

               
Cow position:
               
chr25:61426-61648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
81, 160
               

               
Conread position:
               
170-395
               

               
Cow position:
               
chr25:8560638-8560867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
91, 32
               

               
Conread position:
               
170-395
               

               
Cow position:
               
chr25:12081539-12081322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
170-395
               

               
Cow position:
               
chr25:20007916-20008130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
85, 48
               

               
Conread position:
               
170-397
               

               
Cow position:
               
chr25:4002565-4002802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
71, 198
               

               
Conread position:
               
170-397
               

               
Cow position:
               
chr25:15377102-15377327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 60
               

               
Conread position:
               
172-394
               

               
Cow position:
               
chr25:34169725-34169944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
83, 142
               

               
Conread position:
               
173-396
               

               
Cow position:
               
chr25:36033208-36033437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 217
               

               
Conread position:
               
173-397
               

               
Cow position:
               
chr25:6961378-6961153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
84, 44
               

               
Conread position:
               
174-394
               

               
Cow position:
               
chr25:10218278-10218052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
28, 185
               

               
Conread position:
               
174-396
               

               
Cow position:
               
chr25:7329317-7329548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
65, 154
               

               
Conread position:
               
174-397
               

               
Cow position:
               
chr25:16001747-16001525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 185
               

               
Conread position:
               
174-397
               

               
Cow position:
               
chr25:19129627-19129855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 10
               

               
Conread position:
               
178-343
               

               
Cow position:
               
chr25:2595954-2596133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
182-391
               

               
Cow position:
               
chr25:12899536-12899753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
183-349
               

               
Cow position:
               
chr25:23324582-23324406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
187-384
               

               
Cow position:
               
chr25:34768934-34768745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
185, 122
               

               
Conread position:
               
189-366
               

               
Cow position:
               
chr25:20789703-20789532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
190-362
               

               
Cow position:
               
chr25:2624593-2624774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 148
               

               
Conread position:
               
190-395
               

               
Cow position:
               
chr25:12319549-12319345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
168, 41
               

               
Conread position:
               
191-391
               

               
Cow position:
               
chr25:26090025-26089818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
192-395
               

               
Cow position:
               
chr25:13736520-13736315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
56, 125
               

               
Conread position:
               
193-394
               

               
Cow position:
               
chr25:26270142-26269940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
56, 124
               

               
Conread position:
               
193-397
               

               
Cow position:
               
chr25:14945650-14945450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
195-393
               

               
Cow position:
               
chr25:17914574-17914777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
54, 165
               

               
Conread position:
               
195-395
               

               
Cow position:
               
chr25:36017334-36017540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
199-395
               

               
Cow position:
               
chr25:17704547-17704742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
42, 133
               

               
Conread position:
               
199-397
               

               
Cow position:
               
chr25:13272367-13272569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
199-397
               

               
Cow position:
               
chr25:16714476-16714269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 139
               

               
Conread position:
               
200-395
               

               
Cow position:
               
chr25:8157711-8157505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
200-395
               

               
Cow position:
               
chr25:27801089-27801280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
201-392
               

               
Cow position:
               
chr25:20133515-20133319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
32, 157
               

               
Conread position:
               
204-389
               

               
Cow position:
               
chr25:17144235-17144421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
154, 24
               

               
Conread position:
               
204-394
               

               
Cow position:
               
chr25:15410108-15409916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
205-389
               

               
Cow position:
               
chr25:21042191-21042378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
50, 79
               

               
Conread position:
               
205-394
               

               
Cow position:
               
chr25:25861556-25861356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
206-395
               

               
Cow position:
               
chr25:12755686-12755489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
208-356
               

               
Cow position:
               
chr25:35110323-35110165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
208-395
               

               
Cow position:
               
chr25:3982851-3983038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
46, 108
               

               
Conread position:
               
208-397
               

               
Cow position:
               
chr25:12521154-12520964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
209-392
               

               
Cow position:
               
chr25:26133846-26134037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr25:17342257-17342455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
212-395
               

               
Cow position:
               
chr25:18905692-18905883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
29, 153
               

               
Conread position:
               
212-397
               

               
Cow position:
               
chr25:11315722-11315904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
214-397
               

               
Cow position:
               
chr25:36138825-36138649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
43, 103
               

               
Conread position:
               
215-397
               

               
Cow position:
               
chr25:7750273-7750452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
217-397
               

               
Cow position:
               
chr25:18894907-18894719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 142
               

               
Conread position:
               
218-397
               

               
Cow position:
               
chr25:13443586-13443411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
144, 21
               

               
Conread position:
               
226-345
               

               
Cow position:
               
chr25:14931938-14931810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
226-393
               

               
Cow position:
               
chr25:6943293-6943114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 140
               

               
Conread position:
               
227-384
               

               
Cow position:
               
chr25:15440954-15440791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 140
               

               
Conread position:
               
228-394
               

               
Cow position:
               
chr25:33267550-33267723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
228-395
               

               
Cow position:
               
chr25:23323033-23323198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
35, 134
               

               
Conread position:
               
229-394
               

               
Cow position:
               
chr25:7299385-7299216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
232-395
               

               
Cow position:
               
chr25:21893168-21893336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
232-397
               

               
Cow position:
               
chr25:19317093-19317266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
233-392
               

               
Cow position:
               
chr25:24651616-24651458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
11, 128
               

               
Conread position:
               
233-393
               

               
Cow position:
               
chr25:5271577-5271741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
233-395
               

               
Cow position:
               
chr25:26938396-26938236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 77
               

               
Conread position:
               
235-397
               

               
Cow position:
               
chr25:26679062-26679226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 122
               

               
Conread position:
               
237-395
               

               
Cow position:
               
chr25:22751170-22751009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
239-393
               

               
Cow position:
               
chr25:11066307-11066147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
239-394
               

               
Cow position:
               
chr25:448327-448172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 117
               

               
Conread position:
               
239-395
               

               
Cow position:
               
chr25:6121925-6121771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
241-394
               

               
Cow position:
               
chr25:20216677-20216831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 121
               

               
Conread position:
               
242-393
               

               
Cow position:
               
chr25:10135277-10135430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 114
               

               
Conread position:
               
243-390
               

               
Cow position:
               
chr25:8485651-8485499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
243-393
               

               
Cow position:
               
chr25:6996626-6996782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
247-395
               

               
Cow position:
               
chr25:31732486-31732338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 113
               

               
Conread position:
               
254-387
               

               
Cow position:
               
chr25:22332620-22332753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
29, 107
               

               
Conread position:
               
254-395
               

               
Cow position:
               
chr25:8961632-8961770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 67
               

               
Conread position:
               
254-395
               

               
Cow position:
               
chr25:12997450-12997593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
254-395
               

               
Cow position:
               
chr25:22730691-22730827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
254-397
               

               
Cow position:
               
chr25:6687808-6687950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
254-397
               

               
Cow position:
               
chr25:32588021-32587878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
263-382
               

               
Cow position:
               
chr25:18202059-18201938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
265-397
               

               
Cow position:
               
chr25:33457600-33457732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 6
               

               
Conread position:
               
268-397
               

               
Cow position:
               
chr25:3373500-3373379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
272-397
               

               
Cow position:
               
chr25:13640260-13640382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
276-395
               

               
Cow position:
               
chr25:24504617-24504501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
276-395
               

               
Cow position:
               
chr25:31704881-31705001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
277-394
               

               
Cow position:
               
chr25:17119626-17119740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
282-395
               

               
Cow position:
               
chr25:30816772-30816887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
284-393
               

               
Cow position:
               
chr25:1824207-1824101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
285-395
               

               
Cow position:
               
chr25:12252923-12252810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 73
               

               
Conread position:
               
289-395
               

               
Cow position:
               
chr25:12691790-12691680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               
Show alignments to all cow chromosomes.