• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Emb1-C0005181_A14
        

               
Conread position:
               
139-418
               

               
Cow position:
               
chr11:696171-696456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
79, 108
               

               
Conread position:
               
140-476
               

               
Cow position:
               
chr11:42359291-42358952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
145-466
               

               
Cow position:
               
chr11:41272309-41271984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
74, 205
               

               
Conread position:
               
145-475
               

               
Cow position:
               
chr11:47125715-47125393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
74, 140
               

               
Conread position:
               
146-454
               

               
Cow position:
               
chr11:49057573-49057256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
105, 206
               

               
Conread position:
               
149-347
               

               
Cow position:
               
chr11:61130510-61130710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
153-436
               

               
Cow position:
               
chr11:249322-249614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
56, 190
               

               
Conread position:
               
155-374
               

               
Cow position:
               
chr11:11785494-11785265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 63
               

               
Conread position:
               
155-461
               

               
Cow position:
               
chr11:9874474-9874167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 158
               

               
Conread position:
               
155-465
               

               
Cow position:
               
chr11:8828471-8828784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
63, 114
               

               
Conread position:
               
155-465
               

               
Cow position:
               
chr11:27681662-27681344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 174
               

               
Conread position:
               
155-466
               

               
Cow position:
               
chr11:84890546-84890880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
11, 201
               

               
Conread position:
               
155-471
               

               
Cow position:
               
chr11:42002803-42003112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
9, 65
               

               
Conread position:
               
155-475
               

               
Cow position:
               
chr11:14308796-14308469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
87, 50
               

               
Conread position:
               
155-475
               

               
Cow position:
               
chr11:62573847-62574171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
158-465
               

               
Cow position:
               
chr11:1668825-1668520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
158-471
               

               
Cow position:
               
chr11:43646252-43646570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 195
               

               
Conread position:
               
162-466
               

               
Cow position:
               
chr11:7001775-7002093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 125
               

               
Conread position:
               
162-469
               

               
Cow position:
               
chr11:51729448-51729128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
55, 193
               

               
Conread position:
               
162-471
               

               
Cow position:
               
chr11:58588501-58588185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 189
               

               
Conread position:
               
162-471
               

               
Cow position:
               
chr11:78544084-78543772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
162-475
               

               
Cow position:
               
chr11:4059908-4060218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
99, 130
               

               
Conread position:
               
163-319
               

               
Cow position:
               
chr11:62015852-62016019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
163-409
               

               
Cow position:
               
chr11:21399111-21398859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
163-415
               

               
Cow position:
               
chr11:18785723-18785979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 126
               

               
Conread position:
               
163-417
               

               
Cow position:
               
chr11:21136967-21136704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
56, 154
               

               
Conread position:
               
163-418
               

               
Cow position:
               
chr11:54133934-54134181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
89, 80
               

               
Conread position:
               
163-418
               

               
Cow position:
               
chr11:69392702-69392448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 33
               

               
Conread position:
               
163-423
               

               
Cow position:
               
chr11:27722546-27722274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
56, 185
               

               
Conread position:
               
163-433
               

               
Cow position:
               
chr11:30211058-30210780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
163-436
               

               
Cow position:
               
chr11:31507001-31506717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
84, 58
               

               
Conread position:
               
163-440
               

               
Cow position:
               
chr11:2419924-2419639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
163-442
               

               
Cow position:
               
chr11:9368979-9368694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
56, 154
               

               
Conread position:
               
163-443
               

               
Cow position:
               
chr11:28395629-28395334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 189
               

               
Conread position:
               
163-447
               

               
Cow position:
               
chr11:11752363-11752658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 198
               

               
Conread position:
               
163-449
               

               
Cow position:
               
chr11:16541008-16540721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
163-455
               

               
Cow position:
               
chr11:33824741-33825038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 76
               

               
Conread position:
               
163-459
               

               
Cow position:
               
chr11:71805993-71806294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
62, 147
               

               
Conread position:
               
163-461
               

               
Cow position:
               
chr11:56821089-56821406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 254
               

               
Conread position:
               
163-461
               

               
Cow position:
               
chr11:69402098-69402400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
56, 104
               

               
Conread position:
               
163-466
               

               
Cow position:
               
chr11:4609696-4609991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
163-466
               

               
Cow position:
               
chr11:18484028-18484322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
56, 130
               

               
Conread position:
               
163-466
               

               
Cow position:
               
chr11:48932416-48932742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
56, 315
               

               
Conread position:
               
163-466
               

               
Cow position:
               
chr11:55821564-55821864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
163-467
               

               
Cow position:
               
chr11:55494837-55494521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
163-467
               

               
Cow position:
               
chr11:82107747-82108051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
52, 181
               

               
Conread position:
               
163-470
               

               
Cow position:
               
chr11:24967592-24967295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
163-471
               

               
Cow position:
               
chr11:12111303-12111628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 181
               

               
Conread position:
               
163-471
               

               
Cow position:
               
chr11:18144670-18144974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
163-471
               

               
Cow position:
               
chr11:35882064-35881748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
56, 151
               

               
Conread position:
               
163-471
               

               
Cow position:
               
chr11:49153113-49152789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
51, 143
               

               
Conread position:
               
163-471
               

               
Cow position:
               
chr11:75874599-75874914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 181
               

               
Conread position:
               
163-472
               

               
Cow position:
               
chr11:32378317-32378023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
146, 62
               

               
Conread position:
               
163-475
               

               
Cow position:
               
chr11:38794685-38794379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 55
               

               
Conread position:
               
163-477
               

               
Cow position:
               
chr11:32072296-32071980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
56, 142
               

               
Conread position:
               
163-477
               

               
Cow position:
               
chr11:42083626-42083309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
60, 147
               

               
Conread position:
               
164-453
               

               
Cow position:
               
chr11:20491716-20491425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
164-454
               

               
Cow position:
               
chr11:21852144-21852449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 191
               

               
Conread position:
               
164-454
               

               
Cow position:
               
chr11:67246920-67246646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
260, 47
               

               
Conread position:
               
164-461
               

               
Cow position:
               
chr11:53130934-53130658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
260, 67
               

               
Conread position:
               
164-465
               

               
Cow position:
               
chr11:63156772-63157066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
164-466
               

               
Cow position:
               
chr11:18699042-18698720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 196
               

               
Conread position:
               
164-466
               

               
Cow position:
               
chr11:42519884-42519583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
164-466
               

               
Cow position:
               
chr11:61427740-61427449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
164-466
               

               
Cow position:
               
chr11:77546568-77546260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
164-470
               

               
Cow position:
               
chr11:32438800-32439113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
63, 54
               

               
Conread position:
               
164-471
               

               
Cow position:
               
chr11:16232782-16233098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
64, 55
               

               
Conread position:
               
165-399
               

               
Cow position:
               
chr11:19586612-19586364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 183
               

               
Conread position:
               
165-417
               

               
Cow position:
               
chr11:67871452-67871713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
54, 184
               

               
Conread position:
               
165-466
               

               
Cow position:
               
chr11:22931826-22932132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
51, 99
               

               
Conread position:
               
165-469
               

               
Cow position:
               
chr11:30934563-30934263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
165-471
               

               
Cow position:
               
chr11:47899421-47899117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
66, 167
               

               
Conread position:
               
165-471
               

               
Cow position:
               
chr11:71009278-71008973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
49, 139
               

               
Conread position:
               
166-329
               

               
Cow position:
               
chr11:72869671-72869844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
53, 126
               

               
Conread position:
               
166-464
               

               
Cow position:
               
chr11:45631610-45631917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
57, 154
               

               
Conread position:
               
166-465
               

               
Cow position:
               
chr11:55762027-55761723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
53, 190
               

               
Conread position:
               
166-475
               

               
Cow position:
               
chr11:77683322-77682995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
53, 180
               

               
Conread position:
               
167-473
               

               
Cow position:
               
chr11:18572952-18572637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 182
               

               
Conread position:
               
168-465
               

               
Cow position:
               
chr11:50951703-50951397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
52, 181
               

               
Conread position:
               
168-477
               

               
Cow position:
               
chr11:59365926-59366248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 49
               

               
Conread position:
               
169-475
               

               
Cow position:
               
chr11:64638389-64638700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 59
               

               
Conread position:
               
170-410
               

               
Cow position:
               
chr11:39060464-39060702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 83
               

               
Conread position:
               
170-461
               

               
Cow position:
               
chr11:77705891-77705608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
13, 93
               

               
Conread position:
               
170-475
               

               
Cow position:
               
chr11:74316847-74316542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
170-475
               

               
Cow position:
               
chr11:86925797-86926096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 125
               

               
Conread position:
               
171-470
               

               
Cow position:
               
chr11:63433926-63434217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
174-466
               

               
Cow position:
               
chr11:46413704-46413418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
175-471
               

               
Cow position:
               
chr11:67600914-67600620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
183-467
               

               
Cow position:
               
chr11:39499481-39499200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 128
               

               
Conread position:
               
187-466
               

               
Cow position:
               
chr11:64905127-64904839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 156
               

               
Conread position:
               
187-466
               

               
Cow position:
               
chr11:65409022-65409312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
35, 168
               

               
Conread position:
               
191-438
               

               
Cow position:
               
chr11:21497637-21497391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
116, 130
               

               
Conread position:
               
192-461
               

               
Cow position:
               
chr11:48306223-48306496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
52, 152
               

               
Conread position:
               
192-477
               

               
Cow position:
               
chr11:30708628-30708328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
14, 153
               

               
Conread position:
               
197-477
               

               
Cow position:
               
chr11:5031667-5031944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
104, 112
               

               
Conread position:
               
198-441
               

               
Cow position:
               
chr11:30787332-30787083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
200-469
               

               
Cow position:
               
chr11:66188212-66188481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
200-471
               

               
Cow position:
               
chr11:8840639-8840900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 111
               

               
Conread position:
               
200-471
               

               
Cow position:
               
chr11:43898243-43897978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
206-471
               

               
Cow position:
               
chr11:30879767-30879520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 116
               

               
Conread position:
               
207-397
               

               
Cow position:
               
chr11:32398734-32398548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 40
               

               
Conread position:
               
210-435
               

               
Cow position:
               
chr11:40608499-40608724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
210-471
               

               
Cow position:
               
chr11:36182790-36182525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
210-475
               

               
Cow position:
               
chr11:40258315-40258580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
211-448
               

               
Cow position:
               
chr11:5211648-5211879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
212-411
               

               
Cow position:
               
chr11:80412920-80413114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 129
               

               
Conread position:
               
212-442
               

               
Cow position:
               
chr11:39118851-39118618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 130
               

               
Conread position:
               
212-475
               

               
Cow position:
               
chr11:52983768-52983512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
213-399
               

               
Cow position:
               
chr11:35536679-35536497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
96, 70
               

               
Conread position:
               
213-415
               

               
Cow position:
               
chr11:14466394-14466595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 129
               

               
Conread position:
               
213-417
               

               
Cow position:
               
chr11:63998999-63999198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
94, 105
               

               
Conread position:
               
213-419
               

               
Cow position:
               
chr11:18587503-18587718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
213-419
               

               
Cow position:
               
chr11:47837412-47837205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 123
               

               
Conread position:
               
213-419
               

               
Cow position:
               
chr11:63919961-63920159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
8, 19
               

               
Conread position:
               
213-420
               

               
Cow position:
               
chr11:29659652-29659451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 119
               

               
Conread position:
               
213-427
               

               
Cow position:
               
chr11:375552-375335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 61
               

               
Conread position:
               
213-433
               

               
Cow position:
               
chr11:13940278-13940066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-436
               

               
Cow position:
               
chr11:83033147-83033366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
213-439
               

               
Cow position:
               
chr11:64867928-64868146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
213-441
               

               
Cow position:
               
chr11:50472409-50472182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
97, 126
               

               
Conread position:
               
213-441
               

               
Cow position:
               
chr11:70756570-70756348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
211, 87
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr11:63202156-63202382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
68, 128
               

               
Conread position:
               
213-446
               

               
Cow position:
               
chr11:52690429-52690661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
213-446
               

               
Cow position:
               
chr11:70206411-70206184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
213-452
               

               
Cow position:
               
chr11:28644180-28643940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
94, 132
               

               
Conread position:
               
213-452
               

               
Cow position:
               
chr11:83926135-83925902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
213-454
               

               
Cow position:
               
chr11:17831129-17831365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
89, 95
               

               
Conread position:
               
213-454
               

               
Cow position:
               
chr11:23407557-23407315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
94, 129
               

               
Conread position:
               
213-454
               

               
Cow position:
               
chr11:34646682-34646445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 129
               

               
Conread position:
               
213-454
               

               
Cow position:
               
chr11:48650065-48649835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 121
               

               
Conread position:
               
213-454
               

               
Cow position:
               
chr11:63435613-63435371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 79
               

               
Conread position:
               
213-458
               

               
Cow position:
               
chr11:4652880-4653126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
213-460
               

               
Cow position:
               
chr11:40573243-40573485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
97, 61
               

               
Conread position:
               
213-460
               

               
Cow position:
               
chr11:41985953-41986196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
213-461
               

               
Cow position:
               
chr11:9221639-9221876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
213-461
               

               
Cow position:
               
chr11:11125755-11125510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
213-464
               

               
Cow position:
               
chr11:6633803-6633556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
96, 124
               

               
Conread position:
               
213-464
               

               
Cow position:
               
chr11:70600736-70600976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
213-464
               

               
Cow position:
               
chr11:77758668-77758913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-464
               

               
Cow position:
               
chr11:84228625-84228869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
211, 88
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr11:1362375-1362634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
97, 140
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr11:13592828-13592580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr11:25387161-25386907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
82, 135
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr11:33311070-33310813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 123
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr11:48296123-48295876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
108, 74
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr11:73353967-73354211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr11:1070998-1071249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr11:6202536-6202289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
36, 128
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr11:26535879-26535621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 42
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr11:30476091-30475845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr11:36238870-36238626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
211, 80
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr11:36658731-36658975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr11:52380779-52381031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
94, 108
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr11:56518219-56518467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr11:63909574-63909815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr11:70609890-70609628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr11:71341372-71341609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr11:71501040-71501293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr11:71868510-71868766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-467
               

               
Cow position:
               
chr11:78380972-78381213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:41272-41021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
50, 135
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:377549-377808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 124
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:2084236-2083974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:8544925-8545175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:8988139-8988390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:13500108-13499850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:23137961-23138224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
27, 124
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:26144003-26144261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
89, 124
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:29946821-29947090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
91, 247
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:30192271-30192010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
132, 91
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:30209730-30209983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:34113358-34113103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
84, 122
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:34144832-34145076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
156, 62
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:36799215-36799465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:40478760-40479017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
96, 120
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:40818532-40818802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 255
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:44234448-44234191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
91, 134
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:48272293-48272035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:48474796-48474540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:62620469-62620221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
94, 122
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:65607596-65607853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:70086425-70086162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
97, 51
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:70483759-70484021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:73512351-73512594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:76606765-76606521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:77128753-77128497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:77750680-77750934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr11:81406075-81406321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr11:13043053-13043315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr11:19247107-19247367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr11:33414329-33414065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr11:35684408-35684666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 110
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr11:49149142-49148870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 137
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr11:54334421-54334163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
155, 90
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr11:59873021-59872762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 66
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr11:6233787-6234049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
96, 119
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr11:9270634-9270897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr11:20602319-20602059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr11:30955093-30954829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
96, 111
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr11:61454424-61454701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
67, 73
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr11:61958652-61958916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr11:63065746-63065487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
214-434
               

               
Cow position:
               
chr11:33345537-33345317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
95, 126
               

               
Conread position:
               
214-466
               

               
Cow position:
               
chr11:71492770-71493015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
107, 94
               

               
Conread position:
               
214-466
               

               
Cow position:
               
chr11:82940534-82940779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
210, 7
               

               
Conread position:
               
214-471
               

               
Cow position:
               
chr11:16906959-16907205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
88, 75
               

               
Conread position:
               
214-475
               

               
Cow position:
               
chr11:4662956-4663212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
214-475
               

               
Cow position:
               
chr11:8147807-8148068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
6, 15
               

               
Conread position:
               
215-409
               

               
Cow position:
               
chr11:22499276-22499464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 74
               

               
Conread position:
               
215-466
               

               
Cow position:
               
chr11:80530449-80530208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
106, 65
               

               
Conread position:
               
215-471
               

               
Cow position:
               
chr11:22977784-22978027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
94, 6
               

               
Conread position:
               
215-471
               

               
Cow position:
               
chr11:42043906-42044150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
216-454
               

               
Cow position:
               
chr11:49934641-49934884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
93, 124
               

               
Conread position:
               
218-398
               

               
Cow position:
               
chr11:7013659-7013833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
218-447
               

               
Cow position:
               
chr11:42066951-42066721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
218-471
               

               
Cow position:
               
chr11:21438296-21438053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
91, 122
               

               
Conread position:
               
218-471
               

               
Cow position:
               
chr11:41175859-41176112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 126
               

               
Conread position:
               
218-471
               

               
Cow position:
               
chr11:66424792-66425050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
96, 29
               

               
Conread position:
               
218-471
               

               
Cow position:
               
chr11:83066574-83066332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
207, 10
               

               
Conread position:
               
218-477
               

               
Cow position:
               
chr11:28993650-28993902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
6, 33
               

               
Conread position:
               
218-477
               

               
Cow position:
               
chr11:53778714-53778446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 132
               

               
Conread position:
               
219-392
               

               
Cow position:
               
chr11:41313571-41313740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
219-433
               

               
Cow position:
               
chr11:41293732-41293944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
219-443
               

               
Cow position:
               
chr11:46953033-46952815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
219-465
               

               
Cow position:
               
chr11:67804839-67804595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 118
               

               
Conread position:
               
219-466
               

               
Cow position:
               
chr11:50073023-50072793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
219-475
               

               
Cow position:
               
chr11:36286781-36286530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
219-475
               

               
Cow position:
               
chr11:83230315-83230557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
102, 9
               

               
Conread position:
               
220-466
               

               
Cow position:
               
chr11:44642207-44642444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
89, 8
               

               
Conread position:
               
220-475
               

               
Cow position:
               
chr11:63847932-63847681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
89, 119
               

               
Conread position:
               
221-459
               

               
Cow position:
               
chr11:76114737-76114503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 125
               

               
Conread position:
               
221-465
               

               
Cow position:
               
chr11:42296536-42296774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
221-465
               

               
Cow position:
               
chr11:44222969-44222734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 8
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr11:2092422-2092182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 133
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr11:33341061-33341303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr11:45646509-45646752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 60
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr11:52297137-52297378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
90, 7
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr11:71390471-71390721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 125
               

               
Conread position:
               
221-469
               

               
Cow position:
               
chr11:43360700-43360948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
221-469
               

               
Cow position:
               
chr11:69075994-69075748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr11:11232372-11232617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr11:26483800-26483551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr11:34963153-34962898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr11:45897965-45898215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
76, 120
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr11:55333993-55333749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr11:58990587-58990347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 69
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr11:62155722-62155462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr11:80923240-80923486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 7
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr11:83043279-83043526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 7
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr11:87155603-87155355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr11:23128456-23128708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr11:23232425-23232682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr11:27913368-27913102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr11:38236335-38236075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr11:38639195-38638952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr11:39115578-39115325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 61
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr11:68904992-68905240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
88, 113
               

               
Conread position:
               
221-477
               

               
Cow position:
               
chr11:17227561-17227815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
221-477
               

               
Cow position:
               
chr11:44636670-44636927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
222-419
               

               
Cow position:
               
chr11:8428595-8428400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 127
               

               
Conread position:
               
222-447
               

               
Cow position:
               
chr11:67615163-67615382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 61
               

               
Conread position:
               
222-459
               

               
Cow position:
               
chr11:41133986-41134216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
222-471
               

               
Cow position:
               
chr11:50152730-50152978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 124
               

               
Conread position:
               
224-443
               

               
Cow position:
               
chr11:70745443-70745662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
225-411
               

               
Cow position:
               
chr11:12368784-12368594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 115
               

               
Conread position:
               
226-471
               

               
Cow position:
               
chr11:38670761-38670520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
226-477
               

               
Cow position:
               
chr11:62880552-62880800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 59
               

               
Conread position:
               
228-447
               

               
Cow position:
               
chr11:47772312-47772531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 119
               

               
Conread position:
               
228-465
               

               
Cow position:
               
chr11:27765231-27764999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
81, 109
               

               
Conread position:
               
228-471
               

               
Cow position:
               
chr11:11558249-11558005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 142
               

               
Conread position:
               
228-471
               

               
Cow position:
               
chr11:27747001-27746762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 109
               

               
Conread position:
               
228-475
               

               
Cow position:
               
chr11:20238754-20238505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
81, 94
               

               
Conread position:
               
228-475
               

               
Cow position:
               
chr11:34829708-34829951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 60
               

               
Conread position:
               
229-408
               

               
Cow position:
               
chr11:84795674-84795848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
229-471
               

               
Cow position:
               
chr11:47545208-47544968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
92, 59
               

               
Conread position:
               
230-441
               

               
Cow position:
               
chr11:56734705-56734496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
230-454
               

               
Cow position:
               
chr11:51043856-51044077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
6, 27
               

               
Conread position:
               
230-470
               

               
Cow position:
               
chr11:1485785-1486029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
230-475
               

               
Cow position:
               
chr11:48383596-48383358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 50
               

               
Conread position:
               
230-475
               

               
Cow position:
               
chr11:68913216-68912968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
79, 110
               

               
Conread position:
               
231-470
               

               
Cow position:
               
chr11:47004423-47004187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 106
               

               
Conread position:
               
231-471
               

               
Cow position:
               
chr11:10095418-10095184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 109
               

               
Conread position:
               
236-466
               

               
Cow position:
               
chr11:49231943-49231719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
73, 96
               

               
Conread position:
               
236-471
               

               
Cow position:
               
chr11:79728598-79728832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
73, 86
               

               
Conread position:
               
236-475
               

               
Cow position:
               
chr11:83687364-83687599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 94
               

               
Conread position:
               
237-461
               

               
Cow position:
               
chr11:32254148-32254371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
73, 103
               

               
Conread position:
               
237-471
               

               
Cow position:
               
chr11:34032134-34032365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
238-399
               

               
Cow position:
               
chr11:19946503-19946345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
238-416
               

               
Cow position:
               
chr11:75965584-75965757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
72, 102
               

               
Conread position:
               
238-419
               

               
Cow position:
               
chr11:31875160-31874982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
71, 99
               

               
Conread position:
               
238-444
               

               
Cow position:
               
chr11:70978666-70978863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
71, 93
               

               
Conread position:
               
238-446
               

               
Cow position:
               
chr11:48660002-48659793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
71, 113
               

               
Conread position:
               
238-449
               

               
Cow position:
               
chr11:83397973-83397764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
72, 102
               

               
Conread position:
               
238-454
               

               
Cow position:
               
chr11:66572430-66572648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 66
               

               
Conread position:
               
238-454
               

               
Cow position:
               
chr11:70278045-70278255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
71, 101
               

               
Conread position:
               
238-459
               

               
Cow position:
               
chr11:65444775-65444998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 100
               

               
Conread position:
               
238-465
               

               
Cow position:
               
chr11:33348119-33348342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
71, 96
               

               
Conread position:
               
238-466
               

               
Cow position:
               
chr11:30830546-30830773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
238-466
               

               
Cow position:
               
chr11:35775405-35775181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 71
               

               
Conread position:
               
238-466
               

               
Cow position:
               
chr11:37804486-37804712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
72, 102
               

               
Conread position:
               
238-466
               

               
Cow position:
               
chr11:60143234-60143456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
238-466
               

               
Cow position:
               
chr11:72375612-72375843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
19, 107
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr11:23586706-23586475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr11:30925225-30924987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
6, 183
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr11:32436401-32436169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr11:43430389-43430613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
71, 51
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr11:51144781-51144555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr11:63482362-63482589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
66, 71
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr11:70273374-70273138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
71, 99
               

               
Conread position:
               
238-472
               

               
Cow position:
               
chr11:56654623-56654384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
238-473
               

               
Cow position:
               
chr11:17493551-17493314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
238-475
               

               
Cow position:
               
chr11:46746701-46746462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
239-466
               

               
Cow position:
               
chr11:75479957-75480186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 30
               

               
Conread position:
               
239-471
               

               
Cow position:
               
chr11:7590255-7590031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
239-471
               

               
Cow position:
               
chr11:30120595-30120828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
239-471
               

               
Cow position:
               
chr11:67747351-67747122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 112
               

               
Conread position:
               
239-475
               

               
Cow position:
               
chr11:77745185-77745427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
70, 100
               

               
Conread position:
               
240-443
               

               
Cow position:
               
chr11:80761312-80761514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
240-448
               

               
Cow position:
               
chr11:16261959-16262166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
69, 95
               

               
Conread position:
               
241-466
               

               
Cow position:
               
chr11:30764555-30764325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
241-472
               

               
Cow position:
               
chr11:2788458-2788215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
243-453
               

               
Cow position:
               
chr11:2917523-2917731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 94
               

               
Conread position:
               
243-465
               

               
Cow position:
               
chr11:65762528-65762756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 128
               

               
Conread position:
               
243-466
               

               
Cow position:
               
chr11:2575841-2576061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 99
               

               
Conread position:
               
243-466
               

               
Cow position:
               
chr11:7874201-7873990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
201, 58
               

               
Conread position:
               
243-466
               

               
Cow position:
               
chr11:19591932-19592152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
244-426
               

               
Cow position:
               
chr11:46592527-46592348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
103, 21
               

               
Conread position:
               
247-441
               

               
Cow position:
               
chr11:71807508-71807704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
24, 98
               

               
Conread position:
               
247-449
               

               
Cow position:
               
chr11:48429169-48428964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
90, 60
               

               
Conread position:
               
247-453
               

               
Cow position:
               
chr11:7460556-7460763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
247-454
               

               
Cow position:
               
chr11:28691696-28691902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
247-460
               

               
Cow position:
               
chr11:33753850-33754056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
177, 68
               

               
Conread position:
               
247-464
               

               
Cow position:
               
chr11:38874343-38874559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 93
               

               
Conread position:
               
247-466
               

               
Cow position:
               
chr11:12949889-12950104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
247-471
               

               
Cow position:
               
chr11:84385580-84385800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 91
               

               
Conread position:
               
247-475
               

               
Cow position:
               
chr11:71168531-71168750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
248-460
               

               
Cow position:
               
chr11:4323416-4323204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 91
               

               
Conread position:
               
248-460
               

               
Cow position:
               
chr11:9463893-9463680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
248-466
               

               
Cow position:
               
chr11:80787849-80788070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
248-471
               

               
Cow position:
               
chr11:80756723-80756946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 100
               

               
Conread position:
               
248-473
               

               
Cow position:
               
chr11:36981621-36981395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
250-443
               

               
Cow position:
               
chr11:48672768-48672579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
250-443
               

               
Cow position:
               
chr11:76653075-76652887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 89
               

               
Conread position:
               
250-459
               

               
Cow position:
               
chr11:31337443-31337230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
59, 103
               

               
Conread position:
               
250-460
               

               
Cow position:
               
chr11:3720309-3720103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
250-465
               

               
Cow position:
               
chr11:61858847-61859053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
59, 90
               

               
Conread position:
               
250-471
               

               
Cow position:
               
chr11:18340985-18341198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
63, 89
               

               
Conread position:
               
250-471
               

               
Cow position:
               
chr11:33293723-33293950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 87
               

               
Conread position:
               
252-466
               

               
Cow position:
               
chr11:53512136-53511924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
252-470
               

               
Cow position:
               
chr11:14470419-14470208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 54
               

               
Conread position:
               
253-466
               

               
Cow position:
               
chr11:63499273-63499481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
253-475
               

               
Cow position:
               
chr11:3833310-3833518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
254-458
               

               
Cow position:
               
chr11:53462994-53462793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 86
               

               
Conread position:
               
254-471
               

               
Cow position:
               
chr11:15772662-15772882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 84
               

               
Conread position:
               
257-471
               

               
Cow position:
               
chr11:45872262-45872482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 204
               

               
Conread position:
               
259-449
               

               
Cow position:
               
chr11:81282004-81281806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
259-459
               

               
Cow position:
               
chr11:56728996-56728799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 109
               

               
Conread position:
               
259-464
               

               
Cow position:
               
chr11:3726335-3726130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
52, 80
               

               
Conread position:
               
259-471
               

               
Cow position:
               
chr11:17860109-17860317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 81
               

               
Conread position:
               
259-477
               

               
Cow position:
               
chr11:20684525-20684746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
263-471
               

               
Cow position:
               
chr11:2811687-2811891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
264-459
               

               
Cow position:
               
chr11:33349659-33349849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
264-465
               

               
Cow position:
               
chr11:30597035-30596830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 102
               

               
Conread position:
               
264-466
               

               
Cow position:
               
chr11:68909813-68910008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
266-434
               

               
Cow position:
               
chr11:81167987-81168158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
266-475
               

               
Cow position:
               
chr11:42232646-42232436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
267-465
               

               
Cow position:
               
chr11:57170791-57170986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 71
               

               
Conread position:
               
267-469
               

               
Cow position:
               
chr11:14094381-14094583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
267-471
               

               
Cow position:
               
chr11:48041994-48042202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
269-473
               

               
Cow position:
               
chr11:27386302-27386510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
269-477
               

               
Cow position:
               
chr11:8339369-8339575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
271-471
               

               
Cow position:
               
chr11:10076803-10076603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
273-466
               

               
Cow position:
               
chr11:43644071-43644258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
274-467
               

               
Cow position:
               
chr11:21427961-21428152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
276-477
               

               
Cow position:
               
chr11:24585211-24585010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
279-471
               

               
Cow position:
               
chr11:81174911-81174727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
281-465
               

               
Cow position:
               
chr11:2309898-2309716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
281-471
               

               
Cow position:
               
chr11:42792948-42793135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
286-471
               

               
Cow position:
               
chr11:16251224-16251409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
286-477
               

               
Cow position:
               
chr11:83196517-83196329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
290-454
               

               
Cow position:
               
chr11:51626980-51626816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
290-466
               

               
Cow position:
               
chr11:62979506-62979323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
290-477
               

               
Cow position:
               
chr11:38194173-38193981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
295-471
               

               
Cow position:
               
chr11:71846339-71846508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
125, 26
               

               
Conread position:
               
296-475
               

               
Cow position:
               
chr11:61298975-61299149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
297-466
               

               
Cow position:
               
chr11:7333711-7333880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
304-475
               

               
Cow position:
               
chr11:65843095-65843260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
132, 33
               

               
Conread position:
               
306-466
               

               
Cow position:
               
chr11:47109970-47109812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
306-475
               

               
Cow position:
               
chr11:77241367-77241205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
118, 31
               

               
Conread position:
               
309-465
               

               
Cow position:
               
chr11:8105781-8105625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
309-466
               

               
Cow position:
               
chr11:48901087-48901236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
309-471
               

               
Cow position:
               
chr11:21830352-21830515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
309-475
               

               
Cow position:
               
chr11:47165145-47165306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
310-471
               

               
Cow position:
               
chr11:47586357-47586511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 27
               

               
Conread position:
               
310-471
               

               
Cow position:
               
chr11:63516820-63516664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
114, 29
               

               
Conread position:
               
313-475
               

               
Cow position:
               
chr11:62045386-62045230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
315-473
               

               
Cow position:
               
chr11:27661120-27660961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
319-466
               

               
Cow position:
               
chr11:9837114-9837259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 21
               

               
Conread position:
               
319-471
               

               
Cow position:
               
chr11:75748418-75748271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 10
               

               
Conread position:
               
320-466
               

               
Cow position:
               
chr11:21819458-21819603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
321-475
               

               
Cow position:
               
chr11:43914197-43914045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 16
               

               
Conread position:
               
338-466
               

               
Cow position:
               
chr11:36361917-36362042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
339-471
               

               
Cow position:
               
chr11:71455760-71455628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
86, 14
               

               
Conread position:
               
344-471
               

               
Cow position:
               
chr11:29266506-29266378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
80, 111
               

               
Conread position:
               
346-471
               

               
Cow position:
               
chr11:57111345-57111472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
5, 12
               

               
Conread position:
               
352-464
               

               
Cow position:
               
chr11:62808690-62808805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
353-471
               

               
Cow position:
               
chr11:41577058-41577176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 103
               

               
Conread position:
               
358-466
               

               
Cow position:
               
chr11:77207997-77207890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
358-475
               

               
Cow position:
               
chr11:29786654-29786772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 101
               

               
Conread position:
               
360-475
               

               
Cow position:
               
chr11:73478568-73478448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
364-471
               

               
Cow position:
               
chr11:32609947-32609840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 92
               

               
Conread position:
               
368-471
               

               
Cow position:
               
chr11:84890809-84890912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 88
               
Show alignments to all cow chromosomes.