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Cow genome map

           
Conread name:
           
Emb1-C0005181_A14
        

               
Conread position:
               
138-466
               

               
Cow position:
               
chr23:40781530-40781188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
81, 164
               

               
Conread position:
               
155-454
               

               
Cow position:
               
chr23:9226475-9226147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
11, 162
               

               
Conread position:
               
155-461
               

               
Cow position:
               
chr23:5732737-5732417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
155-466
               

               
Cow position:
               
chr23:15286951-15287268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
64, 198
               

               
Conread position:
               
155-471
               

               
Cow position:
               
chr23:24983990-24984313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
9, 137
               

               
Conread position:
               
155-475
               

               
Cow position:
               
chr23:37223892-37224216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
63, 92
               

               
Conread position:
               
158-464
               

               
Cow position:
               
chr23:21660117-21659807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
158-465
               

               
Cow position:
               
chr23:5389877-5389567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 60
               

               
Conread position:
               
163-340
               

               
Cow position:
               
chr23:23904154-23904346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
163-406
               

               
Cow position:
               
chr23:11750961-11751208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
56, 152
               

               
Conread position:
               
163-409
               

               
Cow position:
               
chr23:35155547-35155292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
55, 184
               

               
Conread position:
               
163-416
               

               
Cow position:
               
chr23:3909716-3909974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
68, 171
               

               
Conread position:
               
163-435
               

               
Cow position:
               
chr23:17484665-17484954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
56, 161
               

               
Conread position:
               
163-451
               

               
Cow position:
               
chr23:1438470-1438173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 161
               

               
Conread position:
               
163-454
               

               
Cow position:
               
chr23:22396264-22396572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
56, 130
               

               
Conread position:
               
163-464
               

               
Cow position:
               
chr23:20996629-20996330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 56
               

               
Conread position:
               
163-466
               

               
Cow position:
               
chr23:22530245-22530552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
163-471
               

               
Cow position:
               
chr23:18322256-18322559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
56, 140
               

               
Conread position:
               
163-471
               

               
Cow position:
               
chr23:21765090-21764775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
163-471
               

               
Cow position:
               
chr23:29345585-29345899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 153
               

               
Conread position:
               
163-475
               

               
Cow position:
               
chr23:2055852-2055559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
148, 54
               

               
Conread position:
               
164-369
               

               
Cow position:
               
chr23:30655660-30655852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
156, 14
               

               
Conread position:
               
164-454
               

               
Cow position:
               
chr23:20388475-20388770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
164-471
               

               
Cow position:
               
chr23:29243123-29242807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
51, 160
               

               
Conread position:
               
164-475
               

               
Cow position:
               
chr23:19774939-19774622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 57
               

               
Conread position:
               
164-477
               

               
Cow position:
               
chr23:13359998-13359662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 131
               

               
Conread position:
               
165-465
               

               
Cow position:
               
chr23:36309576-36309284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
165-471
               

               
Cow position:
               
chr23:5603107-5603418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
54, 189
               

               
Conread position:
               
165-471
               

               
Cow position:
               
chr23:35177492-35177177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
54, 181
               

               
Conread position:
               
165-475
               

               
Cow position:
               
chr23:791865-792180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
165-475
               

               
Cow position:
               
chr23:20171752-20171426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 182
               

               
Conread position:
               
166-458
               

               
Cow position:
               
chr23:40790154-40789847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 205
               

               
Conread position:
               
166-466
               

               
Cow position:
               
chr23:19001898-19002204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
167-456
               

               
Cow position:
               
chr23:40891532-40891231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
50, 187
               

               
Conread position:
               
167-465
               

               
Cow position:
               
chr23:15872526-15872834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
58, 13
               

               
Conread position:
               
167-473
               

               
Cow position:
               
chr23:26051208-26050891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 186
               

               
Conread position:
               
170-473
               

               
Cow position:
               
chr23:12363459-12363763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
172-465
               

               
Cow position:
               
chr23:40651308-40651599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
175-475
               

               
Cow position:
               
chr23:33570286-33569987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
187-416
               

               
Cow position:
               
chr23:17000854-17000620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 81
               

               
Conread position:
               
187-466
               

               
Cow position:
               
chr23:15709932-15710216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 123
               

               
Conread position:
               
192-409
               

               
Cow position:
               
chr23:283259-283474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
117, 160
               

               
Conread position:
               
195-477
               

               
Cow position:
               
chr23:20434934-20435201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
114, 11
               

               
Conread position:
               
197-475
               

               
Cow position:
               
chr23:4528750-4529030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
200-466
               

               
Cow position:
               
chr23:6244472-6244721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 6
               

               
Conread position:
               
200-471
               

               
Cow position:
               
chr23:4563013-4562742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
27, 134
               

               
Conread position:
               
203-463
               

               
Cow position:
               
chr23:27290658-27290909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
203-471
               

               
Cow position:
               
chr23:3262376-3262639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
106, 26
               

               
Conread position:
               
205-471
               

               
Cow position:
               
chr23:27563573-27563852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
12, 153
               

               
Conread position:
               
209-475
               

               
Cow position:
               
chr23:36075694-36075969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
210-471
               

               
Cow position:
               
chr23:13511841-13511593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
70, 113
               

               
Conread position:
               
211-466
               

               
Cow position:
               
chr23:25358839-25358598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
213-383
               

               
Cow position:
               
chr23:4877473-4877302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 119
               

               
Conread position:
               
213-402
               

               
Cow position:
               
chr23:35247480-35247292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
94, 126
               

               
Conread position:
               
213-403
               

               
Cow position:
               
chr23:41348511-41348702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 124
               

               
Conread position:
               
213-410
               

               
Cow position:
               
chr23:22297926-22298117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
108, 76
               

               
Conread position:
               
213-414
               

               
Cow position:
               
chr23:17486711-17486912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
96, 119
               

               
Conread position:
               
213-415
               

               
Cow position:
               
chr23:20002367-20002168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
96, 76
               

               
Conread position:
               
213-419
               

               
Cow position:
               
chr23:29069328-29069533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
98, 135
               

               
Conread position:
               
213-423
               

               
Cow position:
               
chr23:21309300-21309508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
213-440
               

               
Cow position:
               
chr23:39780867-39780644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 127
               

               
Conread position:
               
213-442
               

               
Cow position:
               
chr23:11129345-11129123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr23:306635-306409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr23:1254800-1254574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr23:1656007-1655779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr23:5436530-5436756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr23:34356753-34356528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
213-444
               

               
Cow position:
               
chr23:307568-307341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-451
               

               
Cow position:
               
chr23:4336179-4335954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 75
               

               
Conread position:
               
213-454
               

               
Cow position:
               
chr23:24867422-24867179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
87, 96
               

               
Conread position:
               
213-460
               

               
Cow position:
               
chr23:1397926-1398170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
93, 123
               

               
Conread position:
               
213-464
               

               
Cow position:
               
chr23:5436891-5437134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-464
               

               
Cow position:
               
chr23:30951068-30950824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
35, 125
               

               
Conread position:
               
213-464
               

               
Cow position:
               
chr23:32479905-32480172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
213-464
               

               
Cow position:
               
chr23:38455065-38455318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
20, 128
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr23:10553896-10554145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr23:16699929-16700179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
96, 119
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr23:24704403-24704144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr23:5162542-5162288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
108, 82
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr23:5617686-5617438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr23:7574512-7574770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr23:16582797-16583053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr23:18296919-18296669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
97, 121
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr23:20557732-20557989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
213-466
               

               
Cow position:
               
chr23:21336371-21336629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
96, 127
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr23:344075-344317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr23:1923725-1923979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr23:2501741-2501996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
93, 124
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr23:3282009-3282258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
94, 124
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr23:5723647-5723400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr23:6994870-6995121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
94, 127
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr23:12091244-12091502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 131
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr23:13946150-13945886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr23:14164282-14164544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr23:26632917-26632660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 40
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr23:33601426-33601671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
211, 24
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr23:39083563-39083310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr23:40648619-40648867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
213-474
               

               
Cow position:
               
chr23:18697913-18698176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr23:187291-187026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr23:9652374-9652625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr23:18402177-18402436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr23:30662526-30662776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
226, 76
               

               
Conread position:
               
213-475
               

               
Cow position:
               
chr23:34314844-34315117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr23:4966931-4966670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
108, 80
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr23:11045599-11045337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr23:21452617-21452881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
82, 96
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr23:21502518-21502787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
214-471
               

               
Cow position:
               
chr23:39775837-39775587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
215-466
               

               
Cow position:
               
chr23:9734519-9734276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
215-471
               

               
Cow position:
               
chr23:1742464-1742213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
94, 63
               

               
Conread position:
               
215-471
               

               
Cow position:
               
chr23:14739559-14739306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
215-471
               

               
Cow position:
               
chr23:22804835-22804581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
94, 116
               

               
Conread position:
               
218-419
               

               
Cow position:
               
chr23:4795277-4795082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
81, 62
               

               
Conread position:
               
218-466
               

               
Cow position:
               
chr23:2282073-2282312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
6, 71
               

               
Conread position:
               
218-467
               

               
Cow position:
               
chr23:22414198-22414432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
103, 10
               

               
Conread position:
               
218-475
               

               
Cow position:
               
chr23:35938453-35938195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
91, 125
               

               
Conread position:
               
219-441
               

               
Cow position:
               
chr23:3522851-3522639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
90, 7
               

               
Conread position:
               
219-466
               

               
Cow position:
               
chr23:14838639-14838878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
220-471
               

               
Cow position:
               
chr23:5426538-5426288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
82, 8
               

               
Conread position:
               
221-419
               

               
Cow position:
               
chr23:38502993-38503199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 130
               

               
Conread position:
               
221-447
               

               
Cow position:
               
chr23:1701275-1701051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
221-465
               

               
Cow position:
               
chr23:1636382-1636141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
221-465
               

               
Cow position:
               
chr23:6592604-6592840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr23:1337195-1337439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr23:4968415-4968661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr23:11845379-11845146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
221-466
               

               
Cow position:
               
chr23:13555336-13555570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
93, 7
               

               
Conread position:
               
221-469
               

               
Cow position:
               
chr23:10416313-10416568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
23, 119
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr23:534331-534086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
81, 7
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr23:15743194-15742949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr23:18415941-18416191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 126
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr23:29034418-29034174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr23:33940053-33940297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
46, 110
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr23:20194821-20195066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
221-477
               

               
Cow position:
               
chr23:7845397-7845143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
83, 7
               

               
Conread position:
               
221-477
               

               
Cow position:
               
chr23:26794803-26795054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 126
               

               
Conread position:
               
221-477
               

               
Cow position:
               
chr23:27544931-27544678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
223-435
               

               
Cow position:
               
chr23:39275994-39275782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
223-461
               

               
Cow position:
               
chr23:23409835-23409606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
226-471
               

               
Cow position:
               
chr23:25378746-25378511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
228-455
               

               
Cow position:
               
chr23:36172621-36172394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
228-466
               

               
Cow position:
               
chr23:13599438-13599207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
85, 80
               

               
Conread position:
               
228-471
               

               
Cow position:
               
chr23:1767926-1767687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
81, 112
               

               
Conread position:
               
228-471
               

               
Cow position:
               
chr23:38973945-38973699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
81, 61
               

               
Conread position:
               
228-475
               

               
Cow position:
               
chr23:12334307-12334057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
229-471
               

               
Cow position:
               
chr23:25864600-25864830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 114
               

               
Conread position:
               
230-471
               

               
Cow position:
               
chr23:6367709-6367466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 120
               

               
Conread position:
               
230-471
               

               
Cow position:
               
chr23:28944973-28945207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 108
               

               
Conread position:
               
231-471
               

               
Cow position:
               
chr23:10014624-10014396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
193, 76
               

               
Conread position:
               
231-471
               

               
Cow position:
               
chr23:39806964-39806727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
236-467
               

               
Cow position:
               
chr23:11994810-11994600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
162, 18
               

               
Conread position:
               
237-466
               

               
Cow position:
               
chr23:12050445-12050227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
207, 66
               

               
Conread position:
               
237-469
               

               
Cow position:
               
chr23:10853134-10852908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
99, 52
               

               
Conread position:
               
237-471
               

               
Cow position:
               
chr23:33711849-33711619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
72, 86
               

               
Conread position:
               
238-419
               

               
Cow position:
               
chr23:3191037-3191217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 99
               

               
Conread position:
               
238-460
               

               
Cow position:
               
chr23:4996012-4996232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
238-463
               

               
Cow position:
               
chr23:11081343-11081124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
238-466
               

               
Cow position:
               
chr23:19370987-19371208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
238-466
               

               
Cow position:
               
chr23:21446204-21445978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 51
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr23:26949284-26949056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
239-448
               

               
Cow position:
               
chr23:38208812-38208601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
239-471
               

               
Cow position:
               
chr23:3247675-3247442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
62, 87
               

               
Conread position:
               
243-453
               

               
Cow position:
               
chr23:5795560-5795352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
78, 64
               

               
Conread position:
               
243-467
               

               
Cow position:
               
chr23:16881080-16881301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 66
               

               
Conread position:
               
244-471
               

               
Cow position:
               
chr23:8293583-8293362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 103
               

               
Conread position:
               
245-461
               

               
Cow position:
               
chr23:17404920-17404706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
247-431
               

               
Cow position:
               
chr23:15280418-15280602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
56, 92
               

               
Conread position:
               
247-443
               

               
Cow position:
               
chr23:3244834-3245031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
247-447
               

               
Cow position:
               
chr23:2799659-2799465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 98
               

               
Conread position:
               
247-471
               

               
Cow position:
               
chr23:1885094-1885315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
247-471
               

               
Cow position:
               
chr23:4726872-4726644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
247-475
               

               
Cow position:
               
chr23:35239429-35239197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
248-460
               

               
Cow position:
               
chr23:1605306-1605095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
248-471
               

               
Cow position:
               
chr23:34416639-34416418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
248-471
               

               
Cow position:
               
chr23:37065927-37065698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
250-454
               

               
Cow position:
               
chr23:18802194-18802400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
250-465
               

               
Cow position:
               
chr23:5745257-5745040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
57, 110
               

               
Conread position:
               
250-471
               

               
Cow position:
               
chr23:5516045-5515824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 86
               

               
Conread position:
               
250-471
               

               
Cow position:
               
chr23:16631345-16631125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
250-477
               

               
Cow position:
               
chr23:39573176-39573406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 161
               

               
Conread position:
               
251-466
               

               
Cow position:
               
chr23:1921152-1921365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
58, 85
               

               
Conread position:
               
252-466
               

               
Cow position:
               
chr23:4329601-4329819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
57, 109
               

               
Conread position:
               
254-471
               

               
Cow position:
               
chr23:32309757-32309537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
59, 188
               

               
Conread position:
               
255-454
               

               
Cow position:
               
chr23:29626487-29626288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
255-471
               

               
Cow position:
               
chr23:417218-417017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
54, 82
               

               
Conread position:
               
259-473
               

               
Cow position:
               
chr23:20753079-20752866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
260-443
               

               
Cow position:
               
chr23:349657-349840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
262-471
               

               
Cow position:
               
chr23:23114097-23113886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
266-461
               

               
Cow position:
               
chr23:1647678-1647486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
267-475
               

               
Cow position:
               
chr23:7402760-7402550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
269-471
               

               
Cow position:
               
chr23:20056810-20057009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
274-471
               

               
Cow position:
               
chr23:33153141-33153332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
290-454
               

               
Cow position:
               
chr23:9713358-9713189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
290-475
               

               
Cow position:
               
chr23:1670938-1670753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
304-471
               

               
Cow position:
               
chr23:3208597-3208762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
5, 36
               

               
Conread position:
               
308-471
               

               
Cow position:
               
chr23:39028797-39028637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
310-475
               

               
Cow position:
               
chr23:3955431-3955260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
313-465
               

               
Cow position:
               
chr23:38854725-38854872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
313-474
               

               
Cow position:
               
chr23:1929041-1928889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
317-466
               

               
Cow position:
               
chr23:1068310-1068451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 20
               

               
Conread position:
               
365-475
               

               
Cow position:
               
chr23:360952-361064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
366-475
               

               
Cow position:
               
chr23:7596369-7596482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 92
               
Show alignments to all cow chromosomes.